RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 LRPPRCP42704 1394 aaKnown RBP20.74■□□□□ 0.91
SF3B2-215ENST00000534307 NUTM2BA6NNL0 878 aaPredicted RBP20.74■□□□□ 0.91
SF3B2-215ENST00000534307 NUTM2EB1AL46 878 aaPredicted RBP20.74■□□□□ 0.91
SF3B2-215ENST00000534307 NUTM2AQ8IVF1 878 aaPredicted RBP20.74■□□□□ 0.91
SF3B2-215ENST00000534307 C1orf167Q5SNV9 1468 aa20.73■□□□□ 0.91
SF3B2-215ENST00000534307 ABCC11Q96J66 1382 aa20.72■□□□□ 0.91
SF3B2-215ENST00000534307 LAMC1P11047 1609 aa20.72■□□□□ 0.91
SF3B2-215ENST00000534307 CDC42BPGQ6DT37 1551 aa20.72■□□□□ 0.91
SF3B2-215ENST00000534307 TMEM132EQ6IEE7 984 aa20.7■□□□□ 0.9
SF3B2-215ENST00000534307 C14orf93Q9H972 538 aaKnown RBP20.7■□□□□ 0.9
SF3B2-215ENST00000534307 YTHDC2Q9H6S0 1430 aaKnown RBP20.7■□□□□ 0.9
SF3B2-215ENST00000534307 CFAP70Q5T0N1 1121 aa20.66■□□□□ 0.9
SF3B2-215ENST00000534307 STK26Q9P289 416 aa20.66■□□□□ 0.9
SF3B2-215ENST00000534307 PNPLA6Q8IY17 1366 aa20.66■□□□□ 0.9
SF3B2-215ENST00000534307 PLEKHH1Q9ULM0 1364 aa20.66■□□□□ 0.9
SF3B2-215ENST00000534307 WAPLQ7Z5K2 1190 aa20.65■□□□□ 0.9
SF3B2-215ENST00000534307 ADGRB1O14514 1584 aa20.64■□□□□ 0.9
SF3B2-215ENST00000534307 RBM6P78332 1123 aaKnown RBP20.64■□□□□ 0.89
SF3B2-215ENST00000534307 C8orf37Q96NL8 207 aa20.64■□□□□ 0.89
SF3B2-215ENST00000534307 DDX17Q92841 729 aaKnown RBP20.63■□□□□ 0.89
SF3B2-215ENST00000534307 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
SF3B2-215ENST00000534307 DHX57Q6P158 1386 aaKnown RBP20.62■□□□□ 0.89
SF3B2-215ENST00000534307 ORAI2Q96SN7 254 aa20.62■□□□□ 0.89
SF3B2-215ENST00000534307 QTRT2Q9H974 415 aaKnown RBP20.62■□□□□ 0.89
SF3B2-215ENST00000534307 DLC1Q96QB1 1528 aa20.6■□□□□ 0.89
SF3B2-215ENST00000534307 FMN2Q9NZ56 1722 aa20.59■□□□□ 0.89
SF3B2-215ENST00000534307 DCAF11Q8TEB1 546 aa20.59■□□□□ 0.89
SF3B2-215ENST00000534307 LRRC59Q96AG4 307 aaKnown RBP20.59■□□□□ 0.89
SF3B2-215ENST00000534307 STAC3Q96MF2 364 aa20.59■□□□□ 0.89
SF3B2-215ENST00000534307 ATAD2Q6PL18 1390 aa20.59■□□□□ 0.89
SF3B2-215ENST00000534307 SOS2Q07890 1332 aaPredicted RBP20.58■□□□□ 0.89
SF3B2-215ENST00000534307 MARF1Q9Y4F3 1742 aaKnown RBP20.57■□□□□ 0.88
SF3B2-215ENST00000534307 COL22A1Q8NFW1 1626 aaPredicted RBP20.56■□□□□ 0.88
SF3B2-215ENST00000534307 KDM2AQ9Y2K7 1162 aa20.55■□□□□ 0.88
SF3B2-215ENST00000534307 PXDNQ92626 1479 aa20.55■□□□□ 0.88
SF3B2-215ENST00000534307 ESCO1Q5FWF5 840 aa20.53■□□□□ 0.88
SF3B2-215ENST00000534307 PRAM1Q96QH2 718 aa20.53■□□□□ 0.88
SF3B2-215ENST00000534307 ADGRB2O60241 1585 aa20.53■□□□□ 0.88
SF3B2-215ENST00000534307 ADAMTS2O95450 1211 aa20.52■□□□□ 0.88
SF3B2-215ENST00000534307 NGLY1Q96IV0 654 aa20.51■□□□□ 0.87
SF3B2-215ENST00000534307 ATRNO75882 1429 aa20.51■□□□□ 0.87
SF3B2-215ENST00000534307 KIF1AQ12756 1690 aa20.51■□□□□ 0.87
SF3B2-215ENST00000534307 NPHP3Q7Z494 1330 aa20.51■□□□□ 0.87
SF3B2-215ENST00000534307 NUTM2FA1L443 756 aa20.5■□□□□ 0.87
SF3B2-215ENST00000534307 RGPD8O14715 1765 aaPredicted RBP20.49■□□□□ 0.87
SF3B2-215ENST00000534307 KIAA1210Q9ULL0 1709 aa20.48■□□□□ 0.87
SF3B2-215ENST00000534307 USP32Q8NFA0 1604 aa20.48■□□□□ 0.87
SF3B2-215ENST00000534307 ARHGEF28Q8N1W1 1705 aaKnown RBP20.47■□□□□ 0.87
SF3B2-215ENST00000534307 FOXO3O43524 673 aa20.47■□□□□ 0.87
SF3B2-215ENST00000534307 SAFB2Q14151 953 aaKnown RBP eCLIP20.47■□□□□ 0.87
SF3B2-215ENST00000534307 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
SF3B2-215ENST00000534307 USP21Q9UK80 565 aa20.47■□□□□ 0.87
SF3B2-215ENST00000534307 TRAK1Q9UPV9 953 aa20.47■□□□□ 0.87
SF3B2-215ENST00000534307 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
SF3B2-215ENST00000534307 POGKQ9P215 609 aa20.46■□□□□ 0.87
SF3B2-215ENST00000534307 TRPC5Q9UL62 973 aaPredicted RBP20.46■□□□□ 0.87
SF3B2-215ENST00000534307 BRWD3Q6RI45 1802 aa20.45■□□□□ 0.86
SF3B2-215ENST00000534307 ANKARQ7Z5J8 1434 aa20.44■□□□□ 0.86
SF3B2-215ENST00000534307 FNBP4Q8N3X1 1017 aaPredicted RBP20.44■□□□□ 0.86
SF3B2-215ENST00000534307 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
SF3B2-215ENST00000534307 BCL9LQ86UU0 1499 aa20.42■□□□□ 0.86
SF3B2-215ENST00000534307 LRP5O75197 1615 aa20.42■□□□□ 0.86
SF3B2-215ENST00000534307 TULP4Q9NRJ4 1543 aa20.4■□□□□ 0.86
SF3B2-215ENST00000534307 PHF8Q9UPP1 1060 aa20.4■□□□□ 0.86
SF3B2-215ENST00000534307 GLI3P10071 1580 aa20.39■□□□□ 0.85
SF3B2-215ENST00000534307 SPATA31A3Q5VYP0 1347 aa20.39■□□□□ 0.85
SF3B2-215ENST00000534307 MINK1Q8N4C8 1332 aaPredicted RBP20.39■□□□□ 0.85
SF3B2-215ENST00000534307 HIRIP3Q9BW71 556 aaPredicted RBP20.39■□□□□ 0.85
SF3B2-215ENST00000534307 PRR36Q9H6K5 1346 aa20.38■□□□□ 0.85
SF3B2-215ENST00000534307 NBPF1Q3BBV0 1214 aa20.37■□□□□ 0.85
SF3B2-215ENST00000534307 L3MBTL2Q969R5 705 aa20.37■□□□□ 0.85
SF3B2-215ENST00000534307 EIF3AQ14152 1382 aaKnown RBP20.36■□□□□ 0.85
SF3B2-215ENST00000534307 WASLO00401 505 aaPredicted RBP20.36■□□□□ 0.85
SF3B2-215ENST00000534307 KRT28Q7Z3Y7 464 aa20.36■□□□□ 0.85
SF3B2-215ENST00000534307 CCDC125Q86Z20 511 aa20.36■□□□□ 0.85
SF3B2-215ENST00000534307 SIN3AQ96ST3 1273 aa20.36■□□□□ 0.85
SF3B2-215ENST00000534307 TNS3Q68CZ2 1445 aa20.36■□□□□ 0.85
SF3B2-215ENST00000534307 SBNO1A3KN83 1393 aa20.34■□□□□ 0.85
SF3B2-215ENST00000534307 TRPM3Q9HCF6 1732 aaPredicted RBP20.34■□□□□ 0.85
SF3B2-215ENST00000534307 ATP7BP35670 1465 aa20.33■□□□□ 0.85
SF3B2-215ENST00000534307 BLMP54132 1417 aaPredicted RBP20.32■□□□□ 0.84
SF3B2-215ENST00000534307 TRPM1Q7Z4N2 1603 aa20.31■□□□□ 0.84
SF3B2-215ENST00000534307 ITSN1Q15811 1721 aa20.31■□□□□ 0.84
SF3B2-215ENST00000534307 ABCA3Q99758 1704 aa20.31■□□□□ 0.84
SF3B2-215ENST00000534307 PSME1Q06323 249 aa20.31■□□□□ 0.84
SF3B2-215ENST00000534307 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
SF3B2-215ENST00000534307 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
SF3B2-215ENST00000534307 TOPAZ1Q8N9V7 1692 aa20.3■□□□□ 0.84
SF3B2-215ENST00000534307 ALS2Q96Q42 1657 aa20.29■□□□□ 0.84
SF3B2-215ENST00000534307 SLIT2O94813 1529 aa20.29■□□□□ 0.84
SF3B2-215ENST00000534307 GJD4Q96KN9 370 aaPredicted RBP20.29■□□□□ 0.84
SF3B2-215ENST00000534307 ARHGEF10O15013 1369 aa20.28■□□□□ 0.84
SF3B2-215ENST00000534307 PLCH1Q4KWH8 1693 aa20.28■□□□□ 0.84
SF3B2-215ENST00000534307 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
SF3B2-215ENST00000534307 NEUROD1Q13562 356 aa20.27■□□□□ 0.84
SF3B2-215ENST00000534307 NUDT16Q96DE0 195 aaKnown RBP20.26■□□□□ 0.83
SF3B2-215ENST00000534307 CDK19Q9BWU1 502 aa20.26■□□□□ 0.83
SF3B2-215ENST00000534307 QRICH2Q9H0J4 1663 aa20.26■□□□□ 0.83
SF3B2-215ENST00000534307 NWD2Q9ULI1 1742 aa20.25■□□□□ 0.83
SF3B2-215ENST00000534307 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms