RNA–Protein interactions for RNA: ENST00000534295.1

SCUBE2-213, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-213ENST00000534295 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
SCUBE2-213ENST00000534295 ATRNO75882 1429 aa18.63■□□□□ 0.57
SCUBE2-213ENST00000534295 MYOM2P54296 1465 aa18.61■□□□□ 0.57
SCUBE2-213ENST00000534295 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
SCUBE2-213ENST00000534295 NPHP3Q7Z494 1330 aa18.6■□□□□ 0.57
SCUBE2-213ENST00000534295 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.57
SCUBE2-213ENST00000534295 PPLO60437 1756 aa18.58■□□□□ 0.57
SCUBE2-213ENST00000534295 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.57
SCUBE2-213ENST00000534295 CCDC125Q86Z20 511 aa18.58■□□□□ 0.56
SCUBE2-213ENST00000534295 PXDNQ92626 1479 aa18.57■□□□□ 0.56
SCUBE2-213ENST00000534295 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
SCUBE2-213ENST00000534295 ESCO1Q5FWF5 840 aa18.56■□□□□ 0.56
SCUBE2-213ENST00000534295 TECPR2O15040 1411 aa18.56■□□□□ 0.56
SCUBE2-213ENST00000534295 FOXO3O43524 673 aa18.54■□□□□ 0.56
SCUBE2-213ENST00000534295 FOXD1Q16676 465 aa18.54■□□□□ 0.56
SCUBE2-213ENST00000534295 LRPPRCP42704 1394 aaKnown RBP18.54■□□□□ 0.56
SCUBE2-213ENST00000534295 ABCC11Q96J66 1382 aa18.54■□□□□ 0.56
SCUBE2-213ENST00000534295 GJD4Q96KN9 370 aaPredicted RBP18.53■□□□□ 0.56
SCUBE2-213ENST00000534295 ADGRF5Q8IZF2 1346 aa18.52■□□□□ 0.56
SCUBE2-213ENST00000534295 RGL3Q3MIN7 710 aa18.52■□□□□ 0.56
SCUBE2-213ENST00000534295 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
SCUBE2-213ENST00000534295 CCDC144AA2RUR9 1427 aa18.51■□□□□ 0.55
SCUBE2-213ENST00000534295 STK26Q9P289 416 aa18.51■□□□□ 0.55
SCUBE2-213ENST00000534295 HRCP23327 699 aa18.5■□□□□ 0.55
SCUBE2-213ENST00000534295 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
SCUBE2-213ENST00000534295 SPATA31E1Q6ZUB1 1445 aa18.49■□□□□ 0.55
SCUBE2-213ENST00000534295 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
SCUBE2-213ENST00000534295 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
SCUBE2-213ENST00000534295 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
SCUBE2-213ENST00000534295 XPCQ01831 940 aaPredicted RBP18.48■□□□□ 0.55
SCUBE2-213ENST00000534295 UNC5CLQ8IV45 518 aa18.48■□□□□ 0.55
SCUBE2-213ENST00000534295 SLIT2O94813 1529 aa18.48■□□□□ 0.55
SCUBE2-213ENST00000534295 RAB3GAP2Q9H2M9 1393 aa18.47■□□□□ 0.55
SCUBE2-213ENST00000534295 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
SCUBE2-213ENST00000534295 MPHOSPH9Q99550 1183 aa18.46■□□□□ 0.55
SCUBE2-213ENST00000534295 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
SCUBE2-213ENST00000534295 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
SCUBE2-213ENST00000534295 MARF1Q9Y4F3 1742 aaKnown RBP18.44■□□□□ 0.54
SCUBE2-213ENST00000534295 RALGAPBQ86X10 1494 aa18.44■□□□□ 0.54
SCUBE2-213ENST00000534295 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
SCUBE2-213ENST00000534295 PIK3C2GO75747 1445 aa18.43■□□□□ 0.54
SCUBE2-213ENST00000534295 ONECUT3O60422 494 aaPredicted RBP18.43■□□□□ 0.54
SCUBE2-213ENST00000534295 SRCAPQ6ZRS2 3230 aa18.42■□□□□ 0.54
SCUBE2-213ENST00000534295 BLMP54132 1417 aaPredicted RBP18.42■□□□□ 0.54
SCUBE2-213ENST00000534295 KRT28Q7Z3Y7 464 aa18.42■□□□□ 0.54
SCUBE2-213ENST00000534295 IFT172Q9UG01 1749 aa18.42■□□□□ 0.54
SCUBE2-213ENST00000534295 YTHDC2Q9H6S0 1430 aaKnown RBP18.41■□□□□ 0.54
SCUBE2-213ENST00000534295 KNDC1Q76NI1 1749 aa18.41■□□□□ 0.54
SCUBE2-213ENST00000534295 GLI3P10071 1580 aa18.41■□□□□ 0.54
SCUBE2-213ENST00000534295 VPS72Q15906 364 aa18.4■□□□□ 0.54
SCUBE2-213ENST00000534295 C14orf93Q9H972 538 aaKnown RBP18.4■□□□□ 0.54
SCUBE2-213ENST00000534295 FMN2Q9NZ56 1722 aa18.39■□□□□ 0.53
SCUBE2-213ENST00000534295 HAP1P54257 671 aaPredicted RBP18.38■□□□□ 0.53
SCUBE2-213ENST00000534295 PSME1Q06323 249 aa18.38■□□□□ 0.53
SCUBE2-213ENST00000534295 SBNO1A3KN83 1393 aa18.38■□□□□ 0.53
SCUBE2-213ENST00000534295 EP400Q96L91 3159 aa18.38■□□□□ 0.53
SCUBE2-213ENST00000534295 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
SCUBE2-213ENST00000534295 SEPT12Q8IYM1 358 aa18.37■□□□□ 0.53
SCUBE2-213ENST00000534295 PHF8Q9UPP1 1060 aa18.37■□□□□ 0.53
SCUBE2-213ENST00000534295 TNS3Q68CZ2 1445 aa18.36■□□□□ 0.53
SCUBE2-213ENST00000534295 DHX57Q6P158 1386 aaKnown RBP18.36■□□□□ 0.53
SCUBE2-213ENST00000534295 USP32Q8NFA0 1604 aa18.36■□□□□ 0.53
SCUBE2-213ENST00000534295 NRXN1Q9ULB1 1477 aa18.35■□□□□ 0.53
SCUBE2-213ENST00000534295 RGPD8O14715 1765 aaPredicted RBP18.35■□□□□ 0.53
SCUBE2-213ENST00000534295 ARHGEF10O15013 1369 aa18.33■□□□□ 0.53
SCUBE2-213ENST00000534295 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.52
SCUBE2-213ENST00000534295 CABLES1Q8TDN4 633 aa18.33■□□□□ 0.52
SCUBE2-213ENST00000534295 PCGF6Q9BYE7 350 aa18.33■□□□□ 0.52
SCUBE2-213ENST00000534295 CFAP70Q5T0N1 1121 aa18.32■□□□□ 0.52
SCUBE2-213ENST00000534295 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
SCUBE2-213ENST00000534295 FAM83GA6ND36 823 aa18.31■□□□□ 0.52
SCUBE2-213ENST00000534295 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
SCUBE2-213ENST00000534295 SAFB2Q14151 953 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCUBE2-213ENST00000534295 KRT27Q7Z3Y8 459 aa18.31■□□□□ 0.52
SCUBE2-213ENST00000534295 POGKQ9P215 609 aa18.31■□□□□ 0.52
SCUBE2-213ENST00000534295 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
SCUBE2-213ENST00000534295 PRAM1Q96QH2 718 aa18.3■□□□□ 0.52
SCUBE2-213ENST00000534295 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
SCUBE2-213ENST00000534295 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
SCUBE2-213ENST00000534295 CCDC9Q9Y3X0 531 aaKnown RBP18.29■□□□□ 0.52
SCUBE2-213ENST00000534295 BRWD3Q6RI45 1802 aa18.28■□□□□ 0.52
SCUBE2-213ENST00000534295 DLC1Q96QB1 1528 aa18.28■□□□□ 0.52
SCUBE2-213ENST00000534295 PMFBP1Q8TBY8 1022 aa18.26■□□□□ 0.51
SCUBE2-213ENST00000534295 PLCH1Q4KWH8 1693 aa18.24■□□□□ 0.51
SCUBE2-213ENST00000534295 ABCA3Q99758 1704 aa18.23■□□□□ 0.51
SCUBE2-213ENST00000534295 LRP5O75197 1615 aa18.23■□□□□ 0.51
SCUBE2-213ENST00000534295 ADGRB2O60241 1585 aa18.22■□□□□ 0.51
SCUBE2-213ENST00000534295 BAG6P46379 1132 aa18.22■□□□□ 0.51
SCUBE2-213ENST00000534295 TRAK1Q9UPV9 953 aa18.22■□□□□ 0.51
SCUBE2-213ENST00000534295 GPRASP1Q5JY77 1395 aa18.21■□□□□ 0.51
SCUBE2-213ENST00000534295 A0A0G2JS52 829 aa18.21■□□□□ 0.51
SCUBE2-213ENST00000534295 MYT1Q01538 1121 aa18.21■□□□□ 0.51
SCUBE2-213ENST00000534295 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
SCUBE2-213ENST00000534295 ADGRB1O14514 1584 aa18.21■□□□□ 0.51
SCUBE2-213ENST00000534295 EIF3AQ14152 1382 aaKnown RBP18.2■□□□□ 0.5
SCUBE2-213ENST00000534295 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
SCUBE2-213ENST00000534295 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
SCUBE2-213ENST00000534295 KDM2AQ9Y2K7 1162 aa18.2■□□□□ 0.5
SCUBE2-213ENST00000534295 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
SCUBE2-213ENST00000534295 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms