RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 RAB3GAP2Q9H2M9 1393 aa29.3■■■□□ 2.28
NDUFS3-212ENST00000534208 KNDC1Q76NI1 1749 aa29.29■■■□□ 2.28
NDUFS3-212ENST00000534208 SOS2Q07890 1332 aaPredicted RBP29.29■■■□□ 2.28
NDUFS3-212ENST00000534208 NRXN1Q9ULB1 1477 aa29.26■■■□□ 2.27
NDUFS3-212ENST00000534208 STK26Q9P289 416 aa29.26■■■□□ 2.27
NDUFS3-212ENST00000534208 MYOM2P54296 1465 aa29.24■■■□□ 2.27
NDUFS3-212ENST00000534208 TMEM132EQ6IEE7 984 aa29.24■■■□□ 2.27
NDUFS3-212ENST00000534208 YTHDC2Q9H6S0 1430 aaKnown RBP29.23■■■□□ 2.27
NDUFS3-212ENST00000534208 WAPLQ7Z5K2 1190 aa29.23■■■□□ 2.27
NDUFS3-212ENST00000534208 C14orf93Q9H972 538 aaKnown RBP29.23■■■□□ 2.27
NDUFS3-212ENST00000534208 AFF2P51816 1311 aa29.21■■■□□ 2.27
NDUFS3-212ENST00000534208 SIRT1Q96EB6 747 aa29.2■■■□□ 2.26
NDUFS3-212ENST00000534208 PLEKHH1Q9ULM0 1364 aa29.19■■■□□ 2.26
NDUFS3-212ENST00000534208 RXRBP28702 533 aa29.18■■■□□ 2.26
NDUFS3-212ENST00000534208 ESCO1Q5FWF5 840 aa29.18■■■□□ 2.26
NDUFS3-212ENST00000534208 NPHP3Q7Z494 1330 aa29.18■■■□□ 2.26
NDUFS3-212ENST00000534208 CDK12Q9NYV4 1490 aaPredicted RBP29.17■■■□□ 2.26
NDUFS3-212ENST00000534208 C8orf37Q96NL8 207 aa29.16■■■□□ 2.26
NDUFS3-212ENST00000534208 COL22A1Q8NFW1 1626 aaPredicted RBP29.16■■■□□ 2.26
NDUFS3-212ENST00000534208 HRCP23327 699 aa29.15■■■□□ 2.26
NDUFS3-212ENST00000534208 PXDNQ92626 1479 aa29.15■■■□□ 2.26
NDUFS3-212ENST00000534208 CFAP70Q5T0N1 1121 aa29.14■■■□□ 2.26
NDUFS3-212ENST00000534208 FMN2Q9NZ56 1722 aa29.14■■■□□ 2.25
NDUFS3-212ENST00000534208 DHX57Q6P158 1386 aaKnown RBP29.13■■■□□ 2.25
NDUFS3-212ENST00000534208 FOXO3O43524 673 aa29.1■■■□□ 2.25
NDUFS3-212ENST00000534208 ADAMTS2O95450 1211 aa29.1■■■□□ 2.25
NDUFS3-212ENST00000534208 NGLY1Q96IV0 654 aa29.09■■■□□ 2.25
NDUFS3-212ENST00000534208 NUTM2FA1L443 756 aa29.08■■■□□ 2.25
NDUFS3-212ENST00000534208 QTRT2Q9H974 415 aaKnown RBP29.08■■■□□ 2.25
NDUFS3-212ENST00000534208 KIF1AQ12756 1690 aa29.07■■■□□ 2.24
NDUFS3-212ENST00000534208 DLC1Q96QB1 1528 aa29.07■■■□□ 2.24
NDUFS3-212ENST00000534208 RBM6P78332 1123 aaKnown RBP29.05■■■□□ 2.24
NDUFS3-212ENST00000534208 ADGRB1O14514 1584 aa29.05■■■□□ 2.24
NDUFS3-212ENST00000534208 XPCQ01831 940 aaPredicted RBP29.04■■■□□ 2.24
NDUFS3-212ENST00000534208 FNBP4Q8N3X1 1017 aaPredicted RBP29.02■■■□□ 2.24
NDUFS3-212ENST00000534208 UPF1Q92900 1129 aaKnown RBP eCLIP29.02■■■□□ 2.24
NDUFS3-212ENST00000534208 STAC3Q96MF2 364 aa29.02■■■□□ 2.24
NDUFS3-212ENST00000534208 PRAM1Q96QH2 718 aa29.02■■■□□ 2.24
NDUFS3-212ENST00000534208 RGS12O14924 1447 aa29■■■□□ 2.23
NDUFS3-212ENST00000534208 USP21Q9UK80 565 aa28.99■■■□□ 2.23
NDUFS3-212ENST00000534208 DCAF11Q8TEB1 546 aa28.98■■■□□ 2.23
NDUFS3-212ENST00000534208 RGPD8O14715 1765 aaPredicted RBP28.98■■■□□ 2.23
NDUFS3-212ENST00000534208 MARF1Q9Y4F3 1742 aaKnown RBP28.97■■■□□ 2.23
NDUFS3-212ENST00000534208 SPATA31A3Q5VYP0 1347 aa28.97■■■□□ 2.23
NDUFS3-212ENST00000534208 ADGRB2O60241 1585 aa28.97■■■□□ 2.23
NDUFS3-212ENST00000534208 POGKQ9P215 609 aa28.97■■■□□ 2.23
NDUFS3-212ENST00000534208 SAFB2Q14151 953 aaKnown RBP eCLIP28.96■■■□□ 2.23
NDUFS3-212ENST00000534208 TRPC5Q9UL62 973 aaPredicted RBP28.96■■■□□ 2.23
NDUFS3-212ENST00000534208 PHF8Q9UPP1 1060 aa28.96■■■□□ 2.23
NDUFS3-212ENST00000534208 KDM2AQ9Y2K7 1162 aa28.95■■■□□ 2.22
NDUFS3-212ENST00000534208 KRT28Q7Z3Y7 464 aa28.94■■■□□ 2.22
NDUFS3-212ENST00000534208 ATRNO75882 1429 aa28.94■■■□□ 2.22
NDUFS3-212ENST00000534208 ANKARQ7Z5J8 1434 aa28.94■■■□□ 2.22
NDUFS3-212ENST00000534208 BCL9LQ86UU0 1499 aa28.91■■■□□ 2.22
NDUFS3-212ENST00000534208 TRAK1Q9UPV9 953 aa28.91■■■□□ 2.22
NDUFS3-212ENST00000534208 USP32Q8NFA0 1604 aa28.91■■■□□ 2.22
NDUFS3-212ENST00000534208 PSME1Q06323 249 aa28.9■■■□□ 2.22
NDUFS3-212ENST00000534208 TNS3Q68CZ2 1445 aa28.89■■■□□ 2.22
NDUFS3-212ENST00000534208 SBNO1A3KN83 1393 aa28.88■■■□□ 2.21
NDUFS3-212ENST00000534208 EIF3AQ14152 1382 aaKnown RBP28.86■■■□□ 2.21
NDUFS3-212ENST00000534208 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.84■■■□□ 2.21
NDUFS3-212ENST00000534208 SLIT2O94813 1529 aa28.84■■■□□ 2.21
NDUFS3-212ENST00000534208 HIRIP3Q9BW71 556 aaPredicted RBP28.83■■■□□ 2.21
NDUFS3-212ENST00000534208 MINK1Q8N4C8 1332 aaPredicted RBP28.82■■■□□ 2.2
NDUFS3-212ENST00000534208 ARHGEF10O15013 1369 aa28.82■■■□□ 2.2
NDUFS3-212ENST00000534208 TULP4Q9NRJ4 1543 aa28.82■■■□□ 2.2
NDUFS3-212ENST00000534208 ARHGEF28Q8N1W1 1705 aaKnown RBP28.8■■■□□ 2.2
NDUFS3-212ENST00000534208 WASLO00401 505 aaPredicted RBP28.8■■■□□ 2.2
NDUFS3-212ENST00000534208 PMFBP1Q8TBY8 1022 aa28.8■■■□□ 2.2
NDUFS3-212ENST00000534208 ATAD2Q6PL18 1390 aa28.79■■■□□ 2.2
NDUFS3-212ENST00000534208 PRR36Q9H6K5 1346 aa28.79■■■□□ 2.2
NDUFS3-212ENST00000534208 UNC5CLQ8IV45 518 aa28.78■■■□□ 2.2
NDUFS3-212ENST00000534208 GJD4Q96KN9 370 aaPredicted RBP28.78■■■□□ 2.2
NDUFS3-212ENST00000534208 ABCA3Q99758 1704 aa28.77■■■□□ 2.2
NDUFS3-212ENST00000534208 TRPM3Q9HCF6 1732 aaPredicted RBP28.77■■■□□ 2.2
NDUFS3-212ENST00000534208 KIAA1210Q9ULL0 1709 aa28.77■■■□□ 2.2
NDUFS3-212ENST00000534208 HAP1P54257 671 aaPredicted RBP28.75■■■□□ 2.19
NDUFS3-212ENST00000534208 CABLES1Q8TDN4 633 aa28.75■■■□□ 2.19
NDUFS3-212ENST00000534208 LMOD2Q6P5Q4 547 aa28.74■■■□□ 2.19
NDUFS3-212ENST00000534208 GPRASP1Q5JY77 1395 aa28.74■■■□□ 2.19
NDUFS3-212ENST00000534208 RALGAPBQ86X10 1494 aa28.72■■■□□ 2.19
NDUFS3-212ENST00000534208 NWD2Q9ULI1 1742 aa28.72■■■□□ 2.19
NDUFS3-212ENST00000534208 GLI3P10071 1580 aa28.71■■■□□ 2.19
NDUFS3-212ENST00000534208 ALS2Q96Q42 1657 aa28.71■■■□□ 2.19
NDUFS3-212ENST00000534208 ATP7BP35670 1465 aa28.7■■■□□ 2.18
NDUFS3-212ENST00000534208 PLCH1Q4KWH8 1693 aa28.7■■■□□ 2.18
NDUFS3-212ENST00000534208 ITSN1Q15811 1721 aa28.69■■■□□ 2.18
NDUFS3-212ENST00000534208 EP400Q96L91 3159 aa28.68■■■□□ 2.18
NDUFS3-212ENST00000534208 VPS72Q15906 364 aa28.66■■■□□ 2.18
NDUFS3-212ENST00000534208 NGDNQ8NEJ9 315 aaKnown RBP28.66■■■□□ 2.18
NDUFS3-212ENST00000534208 NUDT16Q96DE0 195 aaKnown RBP28.66■■■□□ 2.18
NDUFS3-212ENST00000534208 PLEKHG5O94827 1062 aa28.65■■■□□ 2.18
NDUFS3-212ENST00000534208 FAM83GA6ND36 823 aa28.63■■■□□ 2.17
NDUFS3-212ENST00000534208 NBPF1Q3BBV0 1214 aa28.63■■■□□ 2.17
NDUFS3-212ENST00000534208 CDK19Q9BWU1 502 aa28.63■■■□□ 2.17
NDUFS3-212ENST00000534208 CCDC125Q86Z20 511 aa28.61■■■□□ 2.17
NDUFS3-212ENST00000534208 CRYBG1Q9Y4K1 1723 aa28.6■■■□□ 2.17
NDUFS3-212ENST00000534208 TOPAZ1Q8N9V7 1692 aa28.6■■■□□ 2.17
NDUFS3-212ENST00000534208 ONECUT3O60422 494 aaPredicted RBP28.59■■■□□ 2.17
NDUFS3-212ENST00000534208 NRAPQ86VF7 1730 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms