RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 SAMD9LQ8IVG5 1584 aa9.27□□□□□ -0.93
CMTM1-220ENST00000534143 CAMSAP2Q08AD1 1489 aa9.27□□□□□ -0.93
CMTM1-220ENST00000534143 ARHGAP5Q13017 1502 aa9.26□□□□□ -0.93
CMTM1-220ENST00000534143 C6orf132Q5T0Z8 1188 aa9.26□□□□□ -0.93
CMTM1-220ENST00000534143 EFCAB2Q5VUJ9 269 aa9.26□□□□□ -0.93
CMTM1-220ENST00000534143 ZBED2Q9BTP6 218 aa9.26□□□□□ -0.93
CMTM1-220ENST00000534143 PPP1R3GB7ZBB8 358 aa9.25□□□□□ -0.93
CMTM1-220ENST00000534143 NBR1Q14596 966 aa9.25□□□□□ -0.93
CMTM1-220ENST00000534143 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
CMTM1-220ENST00000534143 DNMT1P26358 1616 aaKnown RBP9.24□□□□□ -0.93
CMTM1-220ENST00000534143 PTPRKQ15262 1439 aa9.24□□□□□ -0.93
CMTM1-220ENST00000534143 KIAA1107Q9UPP5 1409 aa9.24□□□□□ -0.93
CMTM1-220ENST00000534143 PLEKHH2Q8IVE3 1493 aa9.24□□□□□ -0.93
CMTM1-220ENST00000534143 MBD5Q9P267 1494 aa9.24□□□□□ -0.93
CMTM1-220ENST00000534143 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
CMTM1-220ENST00000534143 EN1Q05925 392 aaPredicted RBP9.24□□□□□ -0.93
CMTM1-220ENST00000534143 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
CMTM1-220ENST00000534143 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
CMTM1-220ENST00000534143 ABCC5O15440 1437 aa9.23□□□□□ -0.93
CMTM1-220ENST00000534143 FANCAO15360 1455 aa9.23□□□□□ -0.93
CMTM1-220ENST00000534143 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
CMTM1-220ENST00000534143 COL9A1P20849 921 aa9.23□□□□□ -0.93
CMTM1-220ENST00000534143 HNRNPMP52272 730 aaKnown RBP eCLIP9.23□□□□□ -0.93
CMTM1-220ENST00000534143 DAPK1P53355 1430 aa9.22□□□□□ -0.93
CMTM1-220ENST00000534143 ABCC1P33527 1531 aa9.22□□□□□ -0.93
CMTM1-220ENST00000534143 ITGAEP38570 1179 aa9.22□□□□□ -0.93
CMTM1-220ENST00000534143 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
CMTM1-220ENST00000534143 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
CMTM1-220ENST00000534143 NEO1Q92859 1461 aa9.21□□□□□ -0.93
CMTM1-220ENST00000534143 CFAP74Q9C0B2 1584 aa9.21□□□□□ -0.93
CMTM1-220ENST00000534143 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.93
CMTM1-220ENST00000534143 BHMG1C9JSJ3 638 aaPredicted RBP9.21□□□□□ -0.94
CMTM1-220ENST00000534143 OSBPP22059 807 aa9.21□□□□□ -0.94
CMTM1-220ENST00000534143 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.94
CMTM1-220ENST00000534143 SYCP2Q9BX26 1530 aa9.21□□□□□ -0.94
CMTM1-220ENST00000534143 MAP3K7O43318 606 aa9.2□□□□□ -0.94
CMTM1-220ENST00000534143 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
CMTM1-220ENST00000534143 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
CMTM1-220ENST00000534143 COL17A1Q9UMD9 1497 aaPredicted RBP9.2□□□□□ -0.94
CMTM1-220ENST00000534143 TSR1Q2NL82 804 aaKnown RBP9.19□□□□□ -0.94
CMTM1-220ENST00000534143 SCAPERQ9BY12 1400 aa9.19□□□□□ -0.94
CMTM1-220ENST00000534143 TRAPPC8Q9Y2L5 1435 aa9.19□□□□□ -0.94
CMTM1-220ENST00000534143 ADGRL1O94910 1474 aa9.19□□□□□ -0.94
CMTM1-220ENST00000534143 CCDC141Q6ZP82 1450 aa9.19□□□□□ -0.94
CMTM1-220ENST00000534143 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-220ENST00000534143 ADGRL2O95490 1459 aa9.18□□□□□ -0.94
CMTM1-220ENST00000534143 ROCK1Q13464 1354 aa9.18□□□□□ -0.94
CMTM1-220ENST00000534143 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
CMTM1-220ENST00000534143 TEX14Q8IWB6 1497 aa9.18□□□□□ -0.94
CMTM1-220ENST00000534143 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
CMTM1-220ENST00000534143 SHANK2Q9UPX8 1470 aa9.18□□□□□ -0.94
CMTM1-220ENST00000534143 MAST1Q9Y2H9 1570 aa9.18□□□□□ -0.94
CMTM1-220ENST00000534143 ADGBQ8N7X0 1667 aa9.17□□□□□ -0.94
CMTM1-220ENST00000534143 TSPY4P0CV99 314 aa9.17□□□□□ -0.94
CMTM1-220ENST00000534143 TSPY10P0CW01 314 aa9.17□□□□□ -0.94
CMTM1-220ENST00000534143 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
CMTM1-220ENST00000534143 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
CMTM1-220ENST00000534143 CHIC2Q9UKJ5 165 aa9.17□□□□□ -0.94
CMTM1-220ENST00000534143 NAIPQ13075 1403 aa9.16□□□□□ -0.94
CMTM1-220ENST00000534143 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
CMTM1-220ENST00000534143 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
CMTM1-220ENST00000534143 SETD5Q9C0A6 1442 aa9.16□□□□□ -0.94
CMTM1-220ENST00000534143 AFAP1Q8N556 730 aa9.16□□□□□ -0.94
CMTM1-220ENST00000534143 HFM1A2PYH4 1435 aa9.15□□□□□ -0.94
CMTM1-220ENST00000534143 RTEL1-TNFRSF6BF6WH68 1400 aa9.15□□□□□ -0.94
CMTM1-220ENST00000534143 RICTORQ6R327 1708 aa9.15□□□□□ -0.94
CMTM1-220ENST00000534143 HRCP23327 699 aa9.15□□□□□ -0.94
CMTM1-220ENST00000534143 NBPF3Q9H094 633 aa9.15□□□□□ -0.94
CMTM1-220ENST00000534143 RRP7BPQ9NSQ0 103 aa9.15□□□□□ -0.94
CMTM1-220ENST00000534143 GCC2Q8IWJ2 1684 aa9.15□□□□□ -0.94
CMTM1-220ENST00000534143 DENND4BO75064 1496 aaPredicted RBP9.15□□□□□ -0.95
CMTM1-220ENST00000534143 POGZQ7Z3K3 1410 aa9.14□□□□□ -0.95
CMTM1-220ENST00000534143 ANKRD30AQ9BXX3 1397 aa9.14□□□□□ -0.95
CMTM1-220ENST00000534143 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
CMTM1-220ENST00000534143 MRPL50Q8N5N7 158 aaKnown RBP9.14□□□□□ -0.95
CMTM1-220ENST00000534143 CERKQ8TCT0 537 aa9.14□□□□□ -0.95
CMTM1-220ENST00000534143 KDM5CP41229 1560 aa9.14□□□□□ -0.95
CMTM1-220ENST00000534143 ZNF518AQ6AHZ1 1483 aa9.14□□□□□ -0.95
CMTM1-220ENST00000534143 SPAG9O60271 1321 aaKnown RBP9.13□□□□□ -0.95
CMTM1-220ENST00000534143 PLXNC1O60486 1568 aa9.13□□□□□ -0.95
CMTM1-220ENST00000534143 INO80Q9ULG1 1556 aaPredicted RBP9.13□□□□□ -0.95
CMTM1-220ENST00000534143 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
CMTM1-220ENST00000534143 KIDINS220Q9ULH0 1771 aa9.13□□□□□ -0.95
CMTM1-220ENST00000534143 RAB3GAP2Q9H2M9 1393 aa9.12□□□□□ -0.95
CMTM1-220ENST00000534143 FRMPD1Q5SYB0 1578 aa9.12□□□□□ -0.95
CMTM1-220ENST00000534143 ZFYVE16Q7Z3T8 1539 aa9.12□□□□□ -0.95
CMTM1-220ENST00000534143 SEMA3EO15041 775 aa9.12□□□□□ -0.95
CMTM1-220ENST00000534143 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
CMTM1-220ENST00000534143 MLH3Q9UHC1 1453 aa9.12□□□□□ -0.95
CMTM1-220ENST00000534143 ATP7AQ04656 1500 aa9.11□□□□□ -0.95
CMTM1-220ENST00000534143 RAPGEF3O95398 923 aa9.11□□□□□ -0.95
CMTM1-220ENST00000534143 CDHR5Q9HBB8 845 aa9.11□□□□□ -0.95
CMTM1-220ENST00000534143 KIF15Q9NS87 1388 aa9.11□□□□□ -0.95
CMTM1-220ENST00000534143 ZMYM4Q5VZL5 1548 aa9.1□□□□□ -0.95
CMTM1-220ENST00000534143 GOLGA8CPA6NN73 597 aa9.1□□□□□ -0.95
CMTM1-220ENST00000534143 PRSS12P56730 875 aa9.1□□□□□ -0.95
CMTM1-220ENST00000534143 CDCA7LQ96GN5 454 aa9.1□□□□□ -0.95
CMTM1-220ENST00000534143 HCSTQ9UBK5 93 aa9.1□□□□□ -0.95
CMTM1-220ENST00000534143 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
CMTM1-220ENST00000534143 HECW2Q9P2P5 1572 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms