RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 LRP6O75581 1613 aa26.06■■□□□ 1.76
AP003555.3-201ENST00000534086 YTHDC2Q9H6S0 1430 aaKnown RBP26.05■■□□□ 1.76
AP003555.3-201ENST00000534086 NRXN1Q9ULB1 1477 aa26.05■■□□□ 1.76
AP003555.3-201ENST00000534086 NUTM2BA6NNL0 878 aaPredicted RBP26.04■■□□□ 1.76
AP003555.3-201ENST00000534086 NUTM2EB1AL46 878 aaPredicted RBP26.04■■□□□ 1.76
AP003555.3-201ENST00000534086 NUTM2AQ8IVF1 878 aaPredicted RBP26.04■■□□□ 1.76
AP003555.3-201ENST00000534086 DHX57Q6P158 1386 aaKnown RBP26.03■■□□□ 1.76
AP003555.3-201ENST00000534086 KNDC1Q76NI1 1749 aa26.02■■□□□ 1.76
AP003555.3-201ENST00000534086 CDC42BPGQ6DT37 1551 aa26.01■■□□□ 1.75
AP003555.3-201ENST00000534086 SIRT1Q96EB6 747 aa26.01■■□□□ 1.75
AP003555.3-201ENST00000534086 PLEKHH1Q9ULM0 1364 aa26.01■■□□□ 1.75
AP003555.3-201ENST00000534086 ESCO1Q5FWF5 840 aa26■■□□□ 1.75
AP003555.3-201ENST00000534086 KDM2AQ9Y2K7 1162 aa26■■□□□ 1.75
AP003555.3-201ENST00000534086 LAMC1P11047 1609 aa25.99■■□□□ 1.75
AP003555.3-201ENST00000534086 DCAF11Q8TEB1 546 aa25.99■■□□□ 1.75
AP003555.3-201ENST00000534086 SOS2Q07890 1332 aaPredicted RBP25.98■■□□□ 1.75
AP003555.3-201ENST00000534086 PNPLA6Q8IY17 1366 aa25.97■■□□□ 1.75
AP003555.3-201ENST00000534086 NUTM2FA1L443 756 aa25.97■■□□□ 1.75
AP003555.3-201ENST00000534086 ZNF772Q68DY9 489 aaPredicted RBP25.96■■□□□ 1.75
AP003555.3-201ENST00000534086 STAC3Q96MF2 364 aa25.96■■□□□ 1.75
AP003555.3-201ENST00000534086 NPHP3Q7Z494 1330 aa25.93■■□□□ 1.74
AP003555.3-201ENST00000534086 PRAM1Q96QH2 718 aa25.92■■□□□ 1.74
AP003555.3-201ENST00000534086 FOXO3O43524 673 aa25.91■■□□□ 1.74
AP003555.3-201ENST00000534086 SAFB2Q14151 953 aaKnown RBP eCLIP25.91■■□□□ 1.74
AP003555.3-201ENST00000534086 POGKQ9P215 609 aa25.91■■□□□ 1.74
AP003555.3-201ENST00000534086 TRAK1Q9UPV9 953 aa25.88■■□□□ 1.73
AP003555.3-201ENST00000534086 FMN2Q9NZ56 1722 aa25.88■■□□□ 1.73
AP003555.3-201ENST00000534086 AFF2P51816 1311 aa25.88■■□□□ 1.73
AP003555.3-201ENST00000534086 C8orf37Q96NL8 207 aa25.87■■□□□ 1.73
AP003555.3-201ENST00000534086 ADGRB1O14514 1584 aa25.86■■□□□ 1.73
AP003555.3-201ENST00000534086 ADAMTS2O95450 1211 aa25.86■■□□□ 1.73
AP003555.3-201ENST00000534086 XPCQ01831 940 aaPredicted RBP25.86■■□□□ 1.73
AP003555.3-201ENST00000534086 DLC1Q96QB1 1528 aa25.86■■□□□ 1.73
AP003555.3-201ENST00000534086 PXDNQ92626 1479 aa25.84■■□□□ 1.73
AP003555.3-201ENST00000534086 RXRBP28702 533 aa25.82■■□□□ 1.72
AP003555.3-201ENST00000534086 NGLY1Q96IV0 654 aa25.82■■□□□ 1.72
AP003555.3-201ENST00000534086 PHF8Q9UPP1 1060 aa25.8■■□□□ 1.72
AP003555.3-201ENST00000534086 KRT28Q7Z3Y7 464 aa25.79■■□□□ 1.72
AP003555.3-201ENST00000534086 KIF1AQ12756 1690 aa25.79■■□□□ 1.72
AP003555.3-201ENST00000534086 RGPD8O14715 1765 aaPredicted RBP25.79■■□□□ 1.72
AP003555.3-201ENST00000534086 COL22A1Q8NFW1 1626 aaPredicted RBP25.78■■□□□ 1.72
AP003555.3-201ENST00000534086 HIRIP3Q9BW71 556 aaPredicted RBP25.78■■□□□ 1.72
AP003555.3-201ENST00000534086 QTRT2Q9H974 415 aaKnown RBP25.78■■□□□ 1.72
AP003555.3-201ENST00000534086 MINK1Q8N4C8 1332 aaPredicted RBP25.77■■□□□ 1.72
AP003555.3-201ENST00000534086 SPATA31A3Q5VYP0 1347 aa25.75■■□□□ 1.71
AP003555.3-201ENST00000534086 PSME1Q06323 249 aa25.74■■□□□ 1.71
AP003555.3-201ENST00000534086 ADGRB2O60241 1585 aa25.73■■□□□ 1.71
AP003555.3-201ENST00000534086 ANKARQ7Z5J8 1434 aa25.73■■□□□ 1.71
AP003555.3-201ENST00000534086 USP21Q9UK80 565 aa25.72■■□□□ 1.71
AP003555.3-201ENST00000534086 WASLO00401 505 aaPredicted RBP25.71■■□□□ 1.71
AP003555.3-201ENST00000534086 RBM6P78332 1123 aaKnown RBP25.71■■□□□ 1.71
AP003555.3-201ENST00000534086 FNBP4Q8N3X1 1017 aaPredicted RBP25.71■■□□□ 1.71
AP003555.3-201ENST00000534086 PMFBP1Q8TBY8 1022 aa25.71■■□□□ 1.71
AP003555.3-201ENST00000534086 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
AP003555.3-201ENST00000534086 CDK12Q9NYV4 1490 aaPredicted RBP25.69■■□□□ 1.7
AP003555.3-201ENST00000534086 USP32Q8NFA0 1604 aa25.69■■□□□ 1.7
AP003555.3-201ENST00000534086 ARHGEF28Q8N1W1 1705 aaKnown RBP25.66■■□□□ 1.7
AP003555.3-201ENST00000534086 KIAA1210Q9ULL0 1709 aa25.66■■□□□ 1.7
AP003555.3-201ENST00000534086 TNS3Q68CZ2 1445 aa25.66■■□□□ 1.7
AP003555.3-201ENST00000534086 NBPF1Q3BBV0 1214 aa25.66■■□□□ 1.7
AP003555.3-201ENST00000534086 TRPC5Q9UL62 973 aaPredicted RBP25.66■■□□□ 1.7
AP003555.3-201ENST00000534086 SBNO1A3KN83 1393 aa25.66■■□□□ 1.7
AP003555.3-201ENST00000534086 PRR36Q9H6K5 1346 aa25.65■■□□□ 1.7
AP003555.3-201ENST00000534086 LMOD2Q6P5Q4 547 aa25.65■■□□□ 1.7
AP003555.3-201ENST00000534086 SIN3AQ96ST3 1273 aa25.65■■□□□ 1.7
AP003555.3-201ENST00000534086 TULP4Q9NRJ4 1543 aa25.64■■□□□ 1.7
AP003555.3-201ENST00000534086 MARF1Q9Y4F3 1742 aaKnown RBP25.63■■□□□ 1.69
AP003555.3-201ENST00000534086 HAP1P54257 671 aaPredicted RBP25.63■■□□□ 1.69
AP003555.3-201ENST00000534086 L3MBTL2Q969R5 705 aa25.63■■□□□ 1.69
AP003555.3-201ENST00000534086 GPRASP1Q5JY77 1395 aa25.61■■□□□ 1.69
AP003555.3-201ENST00000534086 PLEKHG5O94827 1062 aa25.61■■□□□ 1.69
AP003555.3-201ENST00000534086 NEUROD1Q13562 356 aa25.61■■□□□ 1.69
AP003555.3-201ENST00000534086 ARHGEF10O15013 1369 aa25.6■■□□□ 1.69
AP003555.3-201ENST00000534086 NGDNQ8NEJ9 315 aaKnown RBP25.6■■□□□ 1.69
AP003555.3-201ENST00000534086 CABLES1Q8TDN4 633 aa25.6■■□□□ 1.69
AP003555.3-201ENST00000534086 RGS12O14924 1447 aa25.6■■□□□ 1.69
AP003555.3-201ENST00000534086 UPF1Q92900 1129 aaKnown RBP eCLIP25.59■■□□□ 1.69
AP003555.3-201ENST00000534086 NUDT16Q96DE0 195 aaKnown RBP25.59■■□□□ 1.69
AP003555.3-201ENST00000534086 CDK19Q9BWU1 502 aa25.59■■□□□ 1.69
AP003555.3-201ENST00000534086 ATRNO75882 1429 aa25.59■■□□□ 1.69
AP003555.3-201ENST00000534086 BCL9LQ86UU0 1499 aa25.59■■□□□ 1.69
AP003555.3-201ENST00000534086 UNC5CLQ8IV45 518 aa25.54■■□□□ 1.68
AP003555.3-201ENST00000534086 ATP7BP35670 1465 aa25.53■■□□□ 1.68
AP003555.3-201ENST00000534086 PAK3O75914 559 aaPredicted RBP25.53■■□□□ 1.68
AP003555.3-201ENST00000534086 TRPM3Q9HCF6 1732 aaPredicted RBP25.53■■□□□ 1.68
AP003555.3-201ENST00000534086 SLIT2O94813 1529 aa25.53■■□□□ 1.68
AP003555.3-201ENST00000534086 ITSN1Q15811 1721 aa25.52■■□□□ 1.68
AP003555.3-201ENST00000534086 GJD4Q96KN9 370 aaPredicted RBP25.52■■□□□ 1.68
AP003555.3-201ENST00000534086 CENPJQ9HC77 1338 aaPredicted RBP25.52■■□□□ 1.68
AP003555.3-201ENST00000534086 CCDC61Q9Y6R9 512 aa25.51■■□□□ 1.67
AP003555.3-201ENST00000534086 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
AP003555.3-201ENST00000534086 ALS2Q96Q42 1657 aa25.48■■□□□ 1.67
AP003555.3-201ENST00000534086 ABCA3Q99758 1704 aa25.48■■□□□ 1.67
AP003555.3-201ENST00000534086 SRPK2P78362 688 aaKnown RBP25.47■■□□□ 1.67
AP003555.3-201ENST00000534086 TRIM26Q12899 539 aaPredicted RBP25.47■■□□□ 1.67
AP003555.3-201ENST00000534086 ACEP12821 1306 aa25.46■■□□□ 1.67
AP003555.3-201ENST00000534086 FAM83GA6ND36 823 aa25.46■■□□□ 1.67
AP003555.3-201ENST00000534086 PLEKHG3A1L390 1219 aa25.45■■□□□ 1.66
AP003555.3-201ENST00000534086 NBPF8Q3BBV2 869 aa25.45■■□□□ 1.66
AP003555.3-201ENST00000534086 TRPM1Q7Z4N2 1603 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms