RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 RBM6P78332 1123 aaKnown RBP27.03■■□□□ 1.92
UBXN1-216ENST00000533908 WAPLQ7Z5K2 1190 aa27.03■■□□□ 1.92
UBXN1-216ENST00000533908 STK26Q9P289 416 aa27.03■■□□□ 1.92
UBXN1-216ENST00000533908 CCDC144AA2RUR9 1427 aa27.02■■□□□ 1.92
UBXN1-216ENST00000533908 RGS12O14924 1447 aa27.01■■□□□ 1.91
UBXN1-216ENST00000533908 ESCO1Q5FWF5 840 aa27.01■■□□□ 1.91
UBXN1-216ENST00000533908 TMEM132EQ6IEE7 984 aa27.01■■□□□ 1.91
UBXN1-216ENST00000533908 LRPPRCP42704 1394 aaKnown RBP26.97■■□□□ 1.91
UBXN1-216ENST00000533908 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
UBXN1-216ENST00000533908 NUTM2FA1L443 756 aa26.97■■□□□ 1.91
UBXN1-216ENST00000533908 FOXO3O43524 673 aa26.97■■□□□ 1.91
UBXN1-216ENST00000533908 XPCQ01831 940 aaPredicted RBP26.97■■□□□ 1.91
UBXN1-216ENST00000533908 CDC42BPGQ6DT37 1551 aa26.97■■□□□ 1.91
UBXN1-216ENST00000533908 ANKRD30BQ9BXX2 1392 aa26.97■■□□□ 1.91
UBXN1-216ENST00000533908 IFT172Q9UG01 1749 aa26.96■■□□□ 1.91
UBXN1-216ENST00000533908 TECPR2O15040 1411 aa26.96■■□□□ 1.91
UBXN1-216ENST00000533908 ABCC11Q96J66 1382 aa26.96■■□□□ 1.91
UBXN1-216ENST00000533908 FNBP4Q8N3X1 1017 aaPredicted RBP26.95■■□□□ 1.9
UBXN1-216ENST00000533908 USP21Q9UK80 565 aa26.95■■□□□ 1.9
UBXN1-216ENST00000533908 PXDNQ92626 1479 aa26.94■■□□□ 1.9
UBXN1-216ENST00000533908 NPHP3Q7Z494 1330 aa26.94■■□□□ 1.9
UBXN1-216ENST00000533908 COL22A1Q8NFW1 1626 aaPredicted RBP26.94■■□□□ 1.9
UBXN1-216ENST00000533908 PIK3C2GO75747 1445 aa26.92■■□□□ 1.9
UBXN1-216ENST00000533908 MYOM2P54296 1465 aa26.91■■□□□ 1.9
UBXN1-216ENST00000533908 TRPC5Q9UL62 973 aaPredicted RBP26.89■■□□□ 1.9
UBXN1-216ENST00000533908 YTHDC2Q9H6S0 1430 aaKnown RBP26.88■■□□□ 1.89
UBXN1-216ENST00000533908 C14orf93Q9H972 538 aaKnown RBP26.87■■□□□ 1.89
UBXN1-216ENST00000533908 ATRNO75882 1429 aa26.86■■□□□ 1.89
UBXN1-216ENST00000533908 KNDC1Q76NI1 1749 aa26.85■■□□□ 1.89
UBXN1-216ENST00000533908 BCL9LQ86UU0 1499 aa26.85■■□□□ 1.89
UBXN1-216ENST00000533908 CFAP70Q5T0N1 1121 aa26.84■■□□□ 1.89
UBXN1-216ENST00000533908 SIRT1Q96EB6 747 aa26.84■■□□□ 1.89
UBXN1-216ENST00000533908 FMN2Q9NZ56 1722 aa26.82■■□□□ 1.88
UBXN1-216ENST00000533908 SPATA31A3Q5VYP0 1347 aa26.81■■□□□ 1.88
UBXN1-216ENST00000533908 NRXN1Q9ULB1 1477 aa26.8■■□□□ 1.88
UBXN1-216ENST00000533908 KRT28Q7Z3Y7 464 aa26.79■■□□□ 1.88
UBXN1-216ENST00000533908 MARF1Q9Y4F3 1742 aaKnown RBP26.79■■□□□ 1.88
UBXN1-216ENST00000533908 ATAD2Q6PL18 1390 aa26.77■■□□□ 1.88
UBXN1-216ENST00000533908 RGPD8O14715 1765 aaPredicted RBP26.76■■□□□ 1.87
UBXN1-216ENST00000533908 DHX57Q6P158 1386 aaKnown RBP26.75■■□□□ 1.87
UBXN1-216ENST00000533908 SAFB2Q14151 953 aaKnown RBP eCLIP26.75■■□□□ 1.87
UBXN1-216ENST00000533908 GJD4Q96KN9 370 aaPredicted RBP26.75■■□□□ 1.87
UBXN1-216ENST00000533908 PHF8Q9UPP1 1060 aa26.75■■□□□ 1.87
UBXN1-216ENST00000533908 PRAM1Q96QH2 718 aa26.74■■□□□ 1.87
UBXN1-216ENST00000533908 ACIN1Q9UKV3 1341 aaKnown RBP26.73■■□□□ 1.87
UBXN1-216ENST00000533908 KIF1AQ12756 1690 aa26.73■■□□□ 1.87
UBXN1-216ENST00000533908 RAB3GAP2Q9H2M9 1393 aa26.72■■□□□ 1.87
UBXN1-216ENST00000533908 CABLES1Q8TDN4 633 aa26.72■■□□□ 1.87
UBXN1-216ENST00000533908 SLIT2O94813 1529 aa26.7■■□□□ 1.87
UBXN1-216ENST00000533908 UNC5CLQ8IV45 518 aa26.7■■□□□ 1.86
UBXN1-216ENST00000533908 PLEKHG5O94827 1062 aa26.67■■□□□ 1.86
UBXN1-216ENST00000533908 PSME1Q06323 249 aa26.66■■□□□ 1.86
UBXN1-216ENST00000533908 GLI3P10071 1580 aa26.66■■□□□ 1.86
UBXN1-216ENST00000533908 TNS3Q68CZ2 1445 aa26.65■■□□□ 1.86
UBXN1-216ENST00000533908 PMFBP1Q8TBY8 1022 aa26.65■■□□□ 1.86
UBXN1-216ENST00000533908 POGKQ9P215 609 aa26.65■■□□□ 1.86
UBXN1-216ENST00000533908 RALGAPBQ86X10 1494 aa26.65■■□□□ 1.86
UBXN1-216ENST00000533908 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.65■■□□□ 1.86
UBXN1-216ENST00000533908 USP32Q8NFA0 1604 aa26.65■■□□□ 1.86
UBXN1-216ENST00000533908 ADGRB1O14514 1584 aa26.64■■□□□ 1.86
UBXN1-216ENST00000533908 DLC1Q96QB1 1528 aa26.64■■□□□ 1.85
UBXN1-216ENST00000533908 SBNO1A3KN83 1393 aa26.63■■□□□ 1.85
UBXN1-216ENST00000533908 TRAK1Q9UPV9 953 aa26.63■■□□□ 1.85
UBXN1-216ENST00000533908 KDM2AQ9Y2K7 1162 aa26.62■■□□□ 1.85
UBXN1-216ENST00000533908 EP400Q96L91 3159 aa26.61■■□□□ 1.85
UBXN1-216ENST00000533908 LMOD2Q6P5Q4 547 aa26.61■■□□□ 1.85
UBXN1-216ENST00000533908 HIRIP3Q9BW71 556 aaPredicted RBP26.61■■□□□ 1.85
UBXN1-216ENST00000533908 HAP1P54257 671 aaPredicted RBP26.59■■□□□ 1.85
UBXN1-216ENST00000533908 CCDC125Q86Z20 511 aa26.59■■□□□ 1.85
UBXN1-216ENST00000533908 DCAF11Q8TEB1 546 aa26.59■■□□□ 1.85
UBXN1-216ENST00000533908 PRR36Q9H6K5 1346 aa26.59■■□□□ 1.85
UBXN1-216ENST00000533908 ANKARQ7Z5J8 1434 aa26.58■■□□□ 1.85
UBXN1-216ENST00000533908 FAM83GA6ND36 823 aa26.58■■□□□ 1.85
UBXN1-216ENST00000533908 MINK1Q8N4C8 1332 aaPredicted RBP26.58■■□□□ 1.85
UBXN1-216ENST00000533908 VPS72Q15906 364 aa26.57■■□□□ 1.84
UBXN1-216ENST00000533908 ADGRB2O60241 1585 aa26.56■■□□□ 1.84
UBXN1-216ENST00000533908 SEPT12Q8IYM1 358 aa26.55■■□□□ 1.84
UBXN1-216ENST00000533908 BRWD3Q6RI45 1802 aa26.55■■□□□ 1.84
UBXN1-216ENST00000533908 ARHGEF10O15013 1369 aa26.55■■□□□ 1.84
UBXN1-216ENST00000533908 ABCA3Q99758 1704 aa26.54■■□□□ 1.84
UBXN1-216ENST00000533908 ONECUT3O60422 494 aaPredicted RBP26.54■■□□□ 1.84
UBXN1-216ENST00000533908 ZRANB1Q9UGI0 708 aa26.54■■□□□ 1.84
UBXN1-216ENST00000533908 WASLO00401 505 aaPredicted RBP26.52■■□□□ 1.84
UBXN1-216ENST00000533908 PLCH1Q4KWH8 1693 aa26.52■■□□□ 1.84
UBXN1-216ENST00000533908 TRPM3Q9HCF6 1732 aaPredicted RBP26.51■■□□□ 1.83
UBXN1-216ENST00000533908 SRCAPQ6ZRS2 3230 aa26.5■■□□□ 1.83
UBXN1-216ENST00000533908 CCDC9Q9Y3X0 531 aaKnown RBP26.5■■□□□ 1.83
UBXN1-216ENST00000533908 NWD2Q9ULI1 1742 aa26.49■■□□□ 1.83
UBXN1-216ENST00000533908 BLMP54132 1417 aaPredicted RBP26.48■■□□□ 1.83
UBXN1-216ENST00000533908 DEFB132Q7Z7B7 95 aa26.48■■□□□ 1.83
UBXN1-216ENST00000533908 HRCP23327 699 aa26.47■■□□□ 1.83
UBXN1-216ENST00000533908 STAC3Q96MF2 364 aa26.47■■□□□ 1.83
UBXN1-216ENST00000533908 GPRASP1Q5JY77 1395 aa26.46■■□□□ 1.83
UBXN1-216ENST00000533908 TULP4Q9NRJ4 1543 aa26.46■■□□□ 1.83
UBXN1-216ENST00000533908 ALS2Q96Q42 1657 aa26.46■■□□□ 1.83
UBXN1-216ENST00000533908 BTG4Q9NY30 223 aa26.45■■□□□ 1.82
UBXN1-216ENST00000533908 KRT27Q7Z3Y8 459 aa26.44■■□□□ 1.82
UBXN1-216ENST00000533908 NGDNQ8NEJ9 315 aaKnown RBP26.43■■□□□ 1.82
UBXN1-216ENST00000533908 EIF3AQ14152 1382 aaKnown RBP26.43■■□□□ 1.82
UBXN1-216ENST00000533908 NRAPQ86VF7 1730 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms