RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 COL22A1Q8NFW1 1626 aaPredicted RBP27.26■■□□□ 1.95
HIF3A-216ENST00000533789 YTHDC2Q9H6S0 1430 aaKnown RBP27.25■■□□□ 1.95
HIF3A-216ENST00000533789 ABCC11Q96J66 1382 aa27.25■■□□□ 1.95
HIF3A-216ENST00000533789 MARF1Q9Y4F3 1742 aaKnown RBP27.24■■□□□ 1.95
HIF3A-216ENST00000533789 KIF1AQ12756 1690 aa27.24■■□□□ 1.95
HIF3A-216ENST00000533789 ORAI2Q96SN7 254 aa27.22■■□□□ 1.95
HIF3A-216ENST00000533789 STK26Q9P289 416 aa27.22■■□□□ 1.95
HIF3A-216ENST00000533789 ZNF772Q68DY9 489 aaPredicted RBP27.21■■□□□ 1.95
HIF3A-216ENST00000533789 NUTM2BA6NNL0 878 aaPredicted RBP27.2■■□□□ 1.94
HIF3A-216ENST00000533789 NUTM2EB1AL46 878 aaPredicted RBP27.2■■□□□ 1.94
HIF3A-216ENST00000533789 TMEM132EQ6IEE7 984 aa27.2■■□□□ 1.94
HIF3A-216ENST00000533789 NUTM2AQ8IVF1 878 aaPredicted RBP27.2■■□□□ 1.94
HIF3A-216ENST00000533789 SOS2Q07890 1332 aaPredicted RBP27.19■■□□□ 1.94
HIF3A-216ENST00000533789 PLEKHH1Q9ULM0 1364 aa27.19■■□□□ 1.94
HIF3A-216ENST00000533789 WAPLQ7Z5K2 1190 aa27.18■■□□□ 1.94
HIF3A-216ENST00000533789 C14orf93Q9H972 538 aaKnown RBP27.17■■□□□ 1.94
HIF3A-216ENST00000533789 PXDNQ92626 1479 aa27.17■■□□□ 1.94
HIF3A-216ENST00000533789 DLC1Q96QB1 1528 aa27.16■■□□□ 1.94
HIF3A-216ENST00000533789 HRCP23327 699 aa27.15■■□□□ 1.94
HIF3A-216ENST00000533789 ADGRB1O14514 1584 aa27.14■■□□□ 1.94
HIF3A-216ENST00000533789 DHX57Q6P158 1386 aaKnown RBP27.13■■□□□ 1.93
HIF3A-216ENST00000533789 ADGRB2O60241 1585 aa27.13■■□□□ 1.93
HIF3A-216ENST00000533789 ESCO1Q5FWF5 840 aa27.12■■□□□ 1.93
HIF3A-216ENST00000533789 CFAP70Q5T0N1 1121 aa27.12■■□□□ 1.93
HIF3A-216ENST00000533789 AFF2P51816 1311 aa27.12■■□□□ 1.93
HIF3A-216ENST00000533789 NPHP3Q7Z494 1330 aa27.12■■□□□ 1.93
HIF3A-216ENST00000533789 SIRT1Q96EB6 747 aa27.11■■□□□ 1.93
HIF3A-216ENST00000533789 CDK12Q9NYV4 1490 aaPredicted RBP27.09■■□□□ 1.93
HIF3A-216ENST00000533789 ARHGEF28Q8N1W1 1705 aaKnown RBP27.08■■□□□ 1.93
HIF3A-216ENST00000533789 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
HIF3A-216ENST00000533789 C8orf37Q96NL8 207 aa27.06■■□□□ 1.92
HIF3A-216ENST00000533789 NUTM2FA1L443 756 aa27.05■■□□□ 1.92
HIF3A-216ENST00000533789 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
HIF3A-216ENST00000533789 FOXO3O43524 673 aa27.03■■□□□ 1.92
HIF3A-216ENST00000533789 RXRBP28702 533 aa27.03■■□□□ 1.92
HIF3A-216ENST00000533789 ABCA3Q99758 1704 aa27.03■■□□□ 1.92
HIF3A-216ENST00000533789 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.02■■□□□ 1.92
HIF3A-216ENST00000533789 ADAMTS2O95450 1211 aa27.01■■□□□ 1.91
HIF3A-216ENST00000533789 PRAM1Q96QH2 718 aa27.01■■□□□ 1.91
HIF3A-216ENST00000533789 DCAF11Q8TEB1 546 aa27■■□□□ 1.91
HIF3A-216ENST00000533789 ITSN1Q15811 1721 aa26.99■■□□□ 1.91
HIF3A-216ENST00000533789 XPCQ01831 940 aaPredicted RBP26.99■■□□□ 1.91
HIF3A-216ENST00000533789 STAC3Q96MF2 364 aa26.99■■□□□ 1.91
HIF3A-216ENST00000533789 NGLY1Q96IV0 654 aa26.97■■□□□ 1.91
HIF3A-216ENST00000533789 KDM2AQ9Y2K7 1162 aa26.97■■□□□ 1.91
HIF3A-216ENST00000533789 ANKARQ7Z5J8 1434 aa26.97■■□□□ 1.91
HIF3A-216ENST00000533789 SAFB2Q14151 953 aaKnown RBP eCLIP26.96■■□□□ 1.91
HIF3A-216ENST00000533789 RGS12O14924 1447 aa26.96■■□□□ 1.91
HIF3A-216ENST00000533789 TRPM3Q9HCF6 1732 aaPredicted RBP26.96■■□□□ 1.91
HIF3A-216ENST00000533789 POGKQ9P215 609 aa26.95■■□□□ 1.9
HIF3A-216ENST00000533789 QTRT2Q9H974 415 aaKnown RBP26.94■■□□□ 1.9
HIF3A-216ENST00000533789 RBM6P78332 1123 aaKnown RBP26.93■■□□□ 1.9
HIF3A-216ENST00000533789 TULP4Q9NRJ4 1543 aa26.93■■□□□ 1.9
HIF3A-216ENST00000533789 TNS3Q68CZ2 1445 aa26.92■■□□□ 1.9
HIF3A-216ENST00000533789 PHF8Q9UPP1 1060 aa26.92■■□□□ 1.9
HIF3A-216ENST00000533789 PLCH1Q4KWH8 1693 aa26.92■■□□□ 1.9
HIF3A-216ENST00000533789 SPATA31A3Q5VYP0 1347 aa26.91■■□□□ 1.9
HIF3A-216ENST00000533789 TRAK1Q9UPV9 953 aa26.91■■□□□ 1.9
HIF3A-216ENST00000533789 ALS2Q96Q42 1657 aa26.91■■□□□ 1.9
HIF3A-216ENST00000533789 ATRNO75882 1429 aa26.9■■□□□ 1.9
HIF3A-216ENST00000533789 EIF3AQ14152 1382 aaKnown RBP26.89■■□□□ 1.9
HIF3A-216ENST00000533789 FNBP4Q8N3X1 1017 aaPredicted RBP26.89■■□□□ 1.9
HIF3A-216ENST00000533789 USP21Q9UK80 565 aa26.89■■□□□ 1.9
HIF3A-216ENST00000533789 NWD2Q9ULI1 1742 aa26.89■■□□□ 1.9
HIF3A-216ENST00000533789 KRT28Q7Z3Y7 464 aa26.88■■□□□ 1.89
HIF3A-216ENST00000533789 TOPAZ1Q8N9V7 1692 aa26.86■■□□□ 1.89
HIF3A-216ENST00000533789 UPF1Q92900 1129 aaKnown RBP eCLIP26.86■■□□□ 1.89
HIF3A-216ENST00000533789 TRPC5Q9UL62 973 aaPredicted RBP26.86■■□□□ 1.89
HIF3A-216ENST00000533789 CRYBG1Q9Y4K1 1723 aa26.86■■□□□ 1.89
HIF3A-216ENST00000533789 BCL9LQ86UU0 1499 aa26.86■■□□□ 1.89
HIF3A-216ENST00000533789 SBNO1A3KN83 1393 aa26.85■■□□□ 1.89
HIF3A-216ENST00000533789 MINK1Q8N4C8 1332 aaPredicted RBP26.85■■□□□ 1.89
HIF3A-216ENST00000533789 PSME1Q06323 249 aa26.84■■□□□ 1.89
HIF3A-216ENST00000533789 HIRIP3Q9BW71 556 aaPredicted RBP26.84■■□□□ 1.89
HIF3A-216ENST00000533789 SLIT2O94813 1529 aa26.82■■□□□ 1.88
HIF3A-216ENST00000533789 ARHGEF10O15013 1369 aa26.81■■□□□ 1.88
HIF3A-216ENST00000533789 BRWD3Q6RI45 1802 aa26.8■■□□□ 1.88
HIF3A-216ENST00000533789 ATP7BP35670 1465 aa26.8■■□□□ 1.88
HIF3A-216ENST00000533789 PMFBP1Q8TBY8 1022 aa26.79■■□□□ 1.88
HIF3A-216ENST00000533789 PRR36Q9H6K5 1346 aa26.79■■□□□ 1.88
HIF3A-216ENST00000533789 GLI3P10071 1580 aa26.79■■□□□ 1.88
HIF3A-216ENST00000533789 WASLO00401 505 aaPredicted RBP26.78■■□□□ 1.88
HIF3A-216ENST00000533789 QRICH2Q9H0J4 1663 aa26.78■■□□□ 1.88
HIF3A-216ENST00000533789 NRAPQ86VF7 1730 aa26.77■■□□□ 1.88
HIF3A-216ENST00000533789 TRPM1Q7Z4N2 1603 aa26.75■■□□□ 1.87
HIF3A-216ENST00000533789 GPRASP1Q5JY77 1395 aa26.74■■□□□ 1.87
HIF3A-216ENST00000533789 EP400Q96L91 3159 aa26.74■■□□□ 1.87
HIF3A-216ENST00000533789 COL14A1Q05707 1796 aaKnown RBP26.74■■□□□ 1.87
HIF3A-216ENST00000533789 HAP1P54257 671 aaPredicted RBP26.73■■□□□ 1.87
HIF3A-216ENST00000533789 ATAD2Q6PL18 1390 aa26.72■■□□□ 1.87
HIF3A-216ENST00000533789 PHRF1Q9P1Y6 1649 aaKnown RBP26.72■■□□□ 1.87
HIF3A-216ENST00000533789 RALGAPBQ86X10 1494 aa26.71■■□□□ 1.87
HIF3A-216ENST00000533789 LMOD2Q6P5Q4 547 aa26.71■■□□□ 1.87
HIF3A-216ENST00000533789 CABLES1Q8TDN4 633 aa26.71■■□□□ 1.87
HIF3A-216ENST00000533789 UNC5CLQ8IV45 518 aa26.7■■□□□ 1.86
HIF3A-216ENST00000533789 GJD4Q96KN9 370 aaPredicted RBP26.69■■□□□ 1.86
HIF3A-216ENST00000533789 NBPF1Q3BBV0 1214 aa26.66■■□□□ 1.86
HIF3A-216ENST00000533789 PLEKHG5O94827 1062 aa26.65■■□□□ 1.86
HIF3A-216ENST00000533789 NGDNQ8NEJ9 315 aaKnown RBP26.65■■□□□ 1.86
HIF3A-216ENST00000533789 NUDT16Q96DE0 195 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms