RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 C1orf167Q5SNV9 1468 aa22.82■■□□□ 1.24
TSKU-204ENST00000533752 L3MBTL2Q969R5 705 aa22.82■■□□□ 1.24
TSKU-204ENST00000533752 PRAM1Q96QH2 718 aa22.8■■□□□ 1.24
TSKU-204ENST00000533752 POGKQ9P215 609 aa22.8■■□□□ 1.24
TSKU-204ENST00000533752 COL16A1Q07092 1604 aaPredicted RBP22.79■■□□□ 1.24
TSKU-204ENST00000533752 TRAK1Q9UPV9 953 aa22.78■■□□□ 1.24
TSKU-204ENST00000533752 PCGF6Q9BYE7 350 aa22.77■■□□□ 1.24
TSKU-204ENST00000533752 ADGRB2O60241 1585 aa22.76■■□□□ 1.23
TSKU-204ENST00000533752 MED1Q15648 1581 aaPredicted RBP22.76■■□□□ 1.23
TSKU-204ENST00000533752 NHSL1Q5SYE7 1610 aa22.76■■□□□ 1.23
TSKU-204ENST00000533752 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
TSKU-204ENST00000533752 JCADQ9P266 1359 aa22.76■■□□□ 1.23
TSKU-204ENST00000533752 FMN2Q9NZ56 1722 aa22.75■■□□□ 1.23
TSKU-204ENST00000533752 DISP3Q9P2K9 1392 aa22.75■■□□□ 1.23
TSKU-204ENST00000533752 ARHGEF28Q8N1W1 1705 aaKnown RBP22.74■■□□□ 1.23
TSKU-204ENST00000533752 SAFB2Q14151 953 aaKnown RBP eCLIP22.73■■□□□ 1.23
TSKU-204ENST00000533752 EIF3AQ14152 1382 aaKnown RBP22.72■■□□□ 1.23
TSKU-204ENST00000533752 TRPM1Q7Z4N2 1603 aa22.7■■□□□ 1.22
TSKU-204ENST00000533752 ANKARQ7Z5J8 1434 aa22.69■■□□□ 1.22
TSKU-204ENST00000533752 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
TSKU-204ENST00000533752 NBPF1Q3BBV0 1214 aa22.69■■□□□ 1.22
TSKU-204ENST00000533752 ESCO1Q5FWF5 840 aa22.69■■□□□ 1.22
TSKU-204ENST00000533752 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
TSKU-204ENST00000533752 KIF1AQ12756 1690 aa22.68■■□□□ 1.22
TSKU-204ENST00000533752 SHPRHQ149N8 1683 aa22.68■■□□□ 1.22
TSKU-204ENST00000533752 NPHP3Q7Z494 1330 aa22.67■■□□□ 1.22
TSKU-204ENST00000533752 ROCK2O75116 1388 aaKnown RBP22.66■■□□□ 1.22
TSKU-204ENST00000533752 SPATA31A6Q5VVP1 1343 aa22.66■■□□□ 1.22
TSKU-204ENST00000533752 MINK1Q8N4C8 1332 aaPredicted RBP22.66■■□□□ 1.22
TSKU-204ENST00000533752 LRRC59Q96AG4 307 aaKnown RBP22.66■■□□□ 1.22
TSKU-204ENST00000533752 NUTM2FA1L443 756 aa22.65■■□□□ 1.22
TSKU-204ENST00000533752 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.22
TSKU-204ENST00000533752 TULP4Q9NRJ4 1543 aa22.63■■□□□ 1.21
TSKU-204ENST00000533752 PHF23Q9BUL5 403 aaPredicted RBP22.63■■□□□ 1.21
TSKU-204ENST00000533752 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
TSKU-204ENST00000533752 WASLO00401 505 aaPredicted RBP22.62■■□□□ 1.21
TSKU-204ENST00000533752 DDX17Q92841 729 aaKnown RBP22.62■■□□□ 1.21
TSKU-204ENST00000533752 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
TSKU-204ENST00000533752 CENPJQ9HC77 1338 aaPredicted RBP22.61■■□□□ 1.21
TSKU-204ENST00000533752 RALGAPBQ86X10 1494 aa22.6■■□□□ 1.21
TSKU-204ENST00000533752 PXDNQ92626 1479 aa22.6■■□□□ 1.21
TSKU-204ENST00000533752 NBPF8Q3BBV2 869 aa22.59■■□□□ 1.21
TSKU-204ENST00000533752 PHF8Q9UPP1 1060 aa22.59■■□□□ 1.21
TSKU-204ENST00000533752 USP32Q8NFA0 1604 aa22.59■■□□□ 1.21
TSKU-204ENST00000533752 FOXO3O43524 673 aa22.58■■□□□ 1.21
TSKU-204ENST00000533752 PNPLA6Q8IY17 1366 aa22.58■■□□□ 1.21
TSKU-204ENST00000533752 QRICH2Q9H0J4 1663 aa22.55■■□□□ 1.2
TSKU-204ENST00000533752 TIMELESSQ9UNS1 1208 aa22.55■■□□□ 1.2
TSKU-204ENST00000533752 RGPD8O14715 1765 aaPredicted RBP22.55■■□□□ 1.2
TSKU-204ENST00000533752 ATP7BP35670 1465 aa22.54■■□□□ 1.2
TSKU-204ENST00000533752 ITSN1Q15811 1721 aa22.54■■□□□ 1.2
TSKU-204ENST00000533752 LRP6O75581 1613 aa22.54■■□□□ 1.2
TSKU-204ENST00000533752 PRR36Q9H6K5 1346 aa22.53■■□□□ 1.2
TSKU-204ENST00000533752 PSME1Q06323 249 aa22.52■■□□□ 1.2
TSKU-204ENST00000533752 MEX3CQ5U5Q3 659 aaKnown RBP22.52■■□□□ 1.2
TSKU-204ENST00000533752 CDK19Q9BWU1 502 aa22.52■■□□□ 1.2
TSKU-204ENST00000533752 CARD11Q9BXL7 1154 aa22.52■■□□□ 1.2
TSKU-204ENST00000533752 COL22A1Q8NFW1 1626 aaPredicted RBP22.51■■□□□ 1.19
TSKU-204ENST00000533752 XPCQ01831 940 aaPredicted RBP22.51■■□□□ 1.19
TSKU-204ENST00000533752 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
TSKU-204ENST00000533752 NUDT16Q96DE0 195 aaKnown RBP22.5■■□□□ 1.19
TSKU-204ENST00000533752 KRT28Q7Z3Y7 464 aa22.49■■□□□ 1.19
TSKU-204ENST00000533752 SBNO1A3KN83 1393 aa22.49■■□□□ 1.19
TSKU-204ENST00000533752 TNS3Q68CZ2 1445 aa22.48■■□□□ 1.19
TSKU-204ENST00000533752 NUTM2BA6NNL0 878 aaPredicted RBP22.48■■□□□ 1.19
TSKU-204ENST00000533752 NUTM2EB1AL46 878 aaPredicted RBP22.48■■□□□ 1.19
TSKU-204ENST00000533752 NUTM2AQ8IVF1 878 aaPredicted RBP22.48■■□□□ 1.19
TSKU-204ENST00000533752 PMFBP1Q8TBY8 1022 aa22.48■■□□□ 1.19
TSKU-204ENST00000533752 SPATA31A3Q5VYP0 1347 aa22.48■■□□□ 1.19
TSKU-204ENST00000533752 TOPAZ1Q8N9V7 1692 aa22.48■■□□□ 1.19
TSKU-204ENST00000533752 SBNO2Q9Y2G9 1366 aa22.48■■□□□ 1.19
TSKU-204ENST00000533752 SRPK2P78362 688 aaKnown RBP22.47■■□□□ 1.19
TSKU-204ENST00000533752 CCDC61Q9Y6R9 512 aa22.47■■□□□ 1.19
TSKU-204ENST00000533752 EVC2Q86UK5 1308 aa22.47■■□□□ 1.19
TSKU-204ENST00000533752 NGDNQ8NEJ9 315 aaKnown RBP22.46■■□□□ 1.19
TSKU-204ENST00000533752 ARHGEF10O15013 1369 aa22.45■■□□□ 1.18
TSKU-204ENST00000533752 POLR3AO14802 1390 aaPredicted RBP22.42■■□□□ 1.18
TSKU-204ENST00000533752 ILDR2Q71H61 639 aa22.42■■□□□ 1.18
TSKU-204ENST00000533752 RGS17Q9UGC6 210 aaPredicted RBP22.42■■□□□ 1.18
TSKU-204ENST00000533752 ZNF772Q68DY9 489 aaPredicted RBP22.41■■□□□ 1.18
TSKU-204ENST00000533752 PPIP5K1Q6PFW1 1433 aa22.4■■□□□ 1.18
TSKU-204ENST00000533752 TRPM3Q9HCF6 1732 aaPredicted RBP22.4■■□□□ 1.18
TSKU-204ENST00000533752 PLEKHG3A1L390 1219 aa22.4■■□□□ 1.18
TSKU-204ENST00000533752 CABP2Q9NPB3 220 aa22.4■■□□□ 1.18
TSKU-204ENST00000533752 ADAMTS2O95450 1211 aa22.38■■□□□ 1.17
TSKU-204ENST00000533752 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
TSKU-204ENST00000533752 LMOD2Q6P5Q4 547 aa22.37■■□□□ 1.17
TSKU-204ENST00000533752 C8orf37Q96NL8 207 aa22.37■■□□□ 1.17
TSKU-204ENST00000533752 ACEP12821 1306 aa22.36■■□□□ 1.17
TSKU-204ENST00000533752 SLC24A1O60721 1099 aa22.36■■□□□ 1.17
TSKU-204ENST00000533752 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
TSKU-204ENST00000533752 AFF2P51816 1311 aa22.35■■□□□ 1.17
TSKU-204ENST00000533752 BRD4O60885 1362 aaPredicted RBP22.35■■□□□ 1.17
TSKU-204ENST00000533752 PAK3O75914 559 aaPredicted RBP22.33■■□□□ 1.17
TSKU-204ENST00000533752 HAP1P54257 671 aaPredicted RBP22.33■■□□□ 1.17
TSKU-204ENST00000533752 POTEAQ6S8J7 498 aa22.33■■□□□ 1.17
TSKU-204ENST00000533752 NGLY1Q96IV0 654 aa22.33■■□□□ 1.17
TSKU-204ENST00000533752 USP47Q96K76 1375 aa22.33■■□□□ 1.17
TSKU-204ENST00000533752 MARF1Q9Y4F3 1742 aaKnown RBP22.32■■□□□ 1.16
TSKU-204ENST00000533752 CABP1Q9NZU7 370 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms