RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
SYVN1-215ENST00000533685 ZNF335Q9H4Z2 1342 aaPredicted RBP17.3■□□□□ 0.36
SYVN1-215ENST00000533685 STRCP1A6NGW2 1772 aa17.3■□□□□ 0.36
SYVN1-215ENST00000533685 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
SYVN1-215ENST00000533685 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
SYVN1-215ENST00000533685 LRRC7Q96NW7 1537 aa17.28■□□□□ 0.36
SYVN1-215ENST00000533685 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
SYVN1-215ENST00000533685 PROSER2Q86WR7 435 aaPredicted RBP17.28■□□□□ 0.36
SYVN1-215ENST00000533685 TULP4Q9NRJ4 1543 aa17.27■□□□□ 0.36
SYVN1-215ENST00000533685 LTBP4Q8N2S1 1624 aa17.27■□□□□ 0.36
SYVN1-215ENST00000533685 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
SYVN1-215ENST00000533685 TMEM94Q12767 1356 aa17.27■□□□□ 0.35
SYVN1-215ENST00000533685 DISP3Q9P2K9 1392 aa17.26■□□□□ 0.35
SYVN1-215ENST00000533685 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
SYVN1-215ENST00000533685 WASLO00401 505 aaPredicted RBP17.25■□□□□ 0.35
SYVN1-215ENST00000533685 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
SYVN1-215ENST00000533685 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
SYVN1-215ENST00000533685 MINK1Q8N4C8 1332 aaPredicted RBP17.24■□□□□ 0.35
SYVN1-215ENST00000533685 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
SYVN1-215ENST00000533685 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
SYVN1-215ENST00000533685 ANKARQ7Z5J8 1434 aa17.23■□□□□ 0.35
SYVN1-215ENST00000533685 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
SYVN1-215ENST00000533685 KIF7Q2M1P5 1343 aa17.22■□□□□ 0.35
SYVN1-215ENST00000533685 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
SYVN1-215ENST00000533685 MSH6P52701 1360 aa17.22■□□□□ 0.35
SYVN1-215ENST00000533685 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.35
SYVN1-215ENST00000533685 IQSEC2Q5JU85 1478 aa17.21■□□□□ 0.35
SYVN1-215ENST00000533685 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
SYVN1-215ENST00000533685 CADPS2Q86UW7 1296 aa17.2■□□□□ 0.34
SYVN1-215ENST00000533685 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
SYVN1-215ENST00000533685 ATP7BP35670 1465 aa17.18■□□□□ 0.34
SYVN1-215ENST00000533685 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
SYVN1-215ENST00000533685 C14orf37Q86TY3 774 aa17.18■□□□□ 0.34
SYVN1-215ENST00000533685 XIRP1Q702N8 1843 aaKnown RBP17.18■□□□□ 0.34
SYVN1-215ENST00000533685 FMN2Q9NZ56 1722 aa17.17■□□□□ 0.34
SYVN1-215ENST00000533685 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
SYVN1-215ENST00000533685 ATF3P18847 181 aa17.15■□□□□ 0.34
SYVN1-215ENST00000533685 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
SYVN1-215ENST00000533685 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
SYVN1-215ENST00000533685 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
SYVN1-215ENST00000533685 MST1RQ04912 1400 aa17.13■□□□□ 0.33
SYVN1-215ENST00000533685 RBM33Q96EV2 1170 aaKnown RBP17.13■□□□□ 0.33
SYVN1-215ENST00000533685 PRR36Q9H6K5 1346 aa17.13■□□□□ 0.33
SYVN1-215ENST00000533685 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
SYVN1-215ENST00000533685 USP32Q8NFA0 1604 aa17.12■□□□□ 0.33
SYVN1-215ENST00000533685 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
SYVN1-215ENST00000533685 ITSN1Q15811 1721 aa17.12■□□□□ 0.33
SYVN1-215ENST00000533685 MYOM1P52179 1685 aa17.11■□□□□ 0.33
SYVN1-215ENST00000533685 ANKRD36BQ8N2N9 1353 aa17.11■□□□□ 0.33
SYVN1-215ENST00000533685 PPIP5K1Q6PFW1 1433 aa17.11■□□□□ 0.33
SYVN1-215ENST00000533685 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
SYVN1-215ENST00000533685 TERF2IPQ9NYB0 399 aa17.09■□□□□ 0.33
SYVN1-215ENST00000533685 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
SYVN1-215ENST00000533685 CPSF1Q10570 1443 aaKnown RBP17.09■□□□□ 0.33
SYVN1-215ENST00000533685 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
SYVN1-215ENST00000533685 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
SYVN1-215ENST00000533685 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
SYVN1-215ENST00000533685 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
SYVN1-215ENST00000533685 CD163L1Q9NR16 1453 aa17.06■□□□□ 0.32
SYVN1-215ENST00000533685 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
SYVN1-215ENST00000533685 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
SYVN1-215ENST00000533685 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
SYVN1-215ENST00000533685 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
SYVN1-215ENST00000533685 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
SYVN1-215ENST00000533685 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
SYVN1-215ENST00000533685 A0A1W2PP64 1363 aa17.03■□□□□ 0.32
SYVN1-215ENST00000533685 TOM1O60784 492 aa17.03■□□□□ 0.32
SYVN1-215ENST00000533685 EDC4Q6P2E9 1401 aaKnown RBP17.03■□□□□ 0.32
SYVN1-215ENST00000533685 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.32
SYVN1-215ENST00000533685 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
SYVN1-215ENST00000533685 PER1O15534 1290 aaPredicted RBP17.02■□□□□ 0.32
SYVN1-215ENST00000533685 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
SYVN1-215ENST00000533685 ESCO1Q5FWF5 840 aa17.02■□□□□ 0.32
SYVN1-215ENST00000533685 PANK3Q9H999 370 aa17.02■□□□□ 0.32
SYVN1-215ENST00000533685 USP6P35125 1406 aa17.02■□□□□ 0.31
SYVN1-215ENST00000533685 ACEP12821 1306 aa17.01■□□□□ 0.31
SYVN1-215ENST00000533685 SSH2Q76I76 1423 aa17.01■□□□□ 0.31
SYVN1-215ENST00000533685 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
SYVN1-215ENST00000533685 AKAP12Q02952 1782 aa17■□□□□ 0.31
SYVN1-215ENST00000533685 BRINP3Q76B58 766 aa17■□□□□ 0.31
SYVN1-215ENST00000533685 MON2Q7Z3U7 1717 aa17■□□□□ 0.31
SYVN1-215ENST00000533685 ORAI2Q96SN7 254 aa17■□□□□ 0.31
SYVN1-215ENST00000533685 KTN1Q86UP2 1357 aaKnown RBP17■□□□□ 0.31
SYVN1-215ENST00000533685 RGPD8O14715 1765 aaPredicted RBP17■□□□□ 0.31
SYVN1-215ENST00000533685 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
SYVN1-215ENST00000533685 NSD2O96028 1365 aa16.99■□□□□ 0.31
SYVN1-215ENST00000533685 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
SYVN1-215ENST00000533685 CARD14Q9BXL6 1004 aa16.98■□□□□ 0.31
SYVN1-215ENST00000533685 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
SYVN1-215ENST00000533685 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
SYVN1-215ENST00000533685 PMFBP1Q8TBY8 1022 aa16.97■□□□□ 0.31
SYVN1-215ENST00000533685 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
SYVN1-215ENST00000533685 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.31
SYVN1-215ENST00000533685 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
SYVN1-215ENST00000533685 AMER1Q5JTC6 1135 aaPredicted RBP16.95■□□□□ 0.3
SYVN1-215ENST00000533685 PXDNQ92626 1479 aa16.94■□□□□ 0.3
SYVN1-215ENST00000533685 FOXO3O43524 673 aa16.94■□□□□ 0.3
SYVN1-215ENST00000533685 PSME1Q06323 249 aa16.94■□□□□ 0.3
SYVN1-215ENST00000533685 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
SYVN1-215ENST00000533685 SOS2Q07890 1332 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms