RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 IFT172Q9UG01 1749 aa13.66□□□□□ -0.22
ZNF250-209ENST00000533543 PRAG1Q86YV5 1406 aa13.64□□□□□ -0.23
ZNF250-209ENST00000533543 TMEM132EQ6IEE7 984 aa13.64□□□□□ -0.23
ZNF250-209ENST00000533543 STK26Q9P289 416 aa13.64□□□□□ -0.23
ZNF250-209ENST00000533543 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
ZNF250-209ENST00000533543 MST1RQ04912 1400 aa13.64□□□□□ -0.23
ZNF250-209ENST00000533543 MYOM2P54296 1465 aa13.63□□□□□ -0.23
ZNF250-209ENST00000533543 BRINP3Q76B58 766 aa13.63□□□□□ -0.23
ZNF250-209ENST00000533543 NRXN1Q9ULB1 1477 aa13.62□□□□□ -0.23
ZNF250-209ENST00000533543 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
ZNF250-209ENST00000533543 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
ZNF250-209ENST00000533543 CFAP70Q5T0N1 1121 aa13.61□□□□□ -0.23
ZNF250-209ENST00000533543 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
ZNF250-209ENST00000533543 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
ZNF250-209ENST00000533543 TECPR2O15040 1411 aa13.6□□□□□ -0.23
ZNF250-209ENST00000533543 WAPLQ7Z5K2 1190 aa13.6□□□□□ -0.23
ZNF250-209ENST00000533543 ABCC11Q96J66 1382 aa13.59□□□□□ -0.23
ZNF250-209ENST00000533543 YTHDC2Q9H6S0 1430 aaKnown RBP13.59□□□□□ -0.23
ZNF250-209ENST00000533543 DCAF11Q8TEB1 546 aa13.59□□□□□ -0.23
ZNF250-209ENST00000533543 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
ZNF250-209ENST00000533543 COL16A1Q07092 1604 aaPredicted RBP13.59□□□□□ -0.23
ZNF250-209ENST00000533543 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
ZNF250-209ENST00000533543 JCADQ9P266 1359 aa13.58□□□□□ -0.23
ZNF250-209ENST00000533543 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.23
ZNF250-209ENST00000533543 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
ZNF250-209ENST00000533543 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.24
ZNF250-209ENST00000533543 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
ZNF250-209ENST00000533543 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
ZNF250-209ENST00000533543 KNDC1Q76NI1 1749 aa13.55□□□□□ -0.24
ZNF250-209ENST00000533543 LAMC1P11047 1609 aa13.54□□□□□ -0.24
ZNF250-209ENST00000533543 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
ZNF250-209ENST00000533543 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
ZNF250-209ENST00000533543 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
ZNF250-209ENST00000533543 STAC3Q96MF2 364 aa13.53□□□□□ -0.24
ZNF250-209ENST00000533543 RGS17Q9UGC6 210 aaPredicted RBP13.53□□□□□ -0.24
ZNF250-209ENST00000533543 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.25
ZNF250-209ENST00000533543 PRAM1Q96QH2 718 aa13.52□□□□□ -0.25
ZNF250-209ENST00000533543 ADGRB1O14514 1584 aa13.52□□□□□ -0.25
ZNF250-209ENST00000533543 NHSL1Q5SYE7 1610 aa13.52□□□□□ -0.25
ZNF250-209ENST00000533543 SPATA31A6Q5VVP1 1343 aa13.51□□□□□ -0.25
ZNF250-209ENST00000533543 ESCO1Q5FWF5 840 aa13.51□□□□□ -0.25
ZNF250-209ENST00000533543 TRAK1Q9UPV9 953 aa13.51□□□□□ -0.25
ZNF250-209ENST00000533543 LRP6O75581 1613 aa13.5□□□□□ -0.25
ZNF250-209ENST00000533543 SOCS7O14512 581 aa13.5□□□□□ -0.25
ZNF250-209ENST00000533543 LRRC59Q96AG4 307 aaKnown RBP13.5□□□□□ -0.25
ZNF250-209ENST00000533543 POGKQ9P215 609 aa13.5□□□□□ -0.25
ZNF250-209ENST00000533543 ZBTB12Q9Y330 459 aaPredicted RBP13.5□□□□□ -0.25
ZNF250-209ENST00000533543 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
ZNF250-209ENST00000533543 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
ZNF250-209ENST00000533543 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
ZNF250-209ENST00000533543 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
ZNF250-209ENST00000533543 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
ZNF250-209ENST00000533543 SOS2Q07890 1332 aaPredicted RBP13.48□□□□□ -0.25
ZNF250-209ENST00000533543 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
ZNF250-209ENST00000533543 SIN3AQ96ST3 1273 aa13.48□□□□□ -0.25
ZNF250-209ENST00000533543 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
ZNF250-209ENST00000533543 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
ZNF250-209ENST00000533543 FOXO3O43524 673 aa13.46□□□□□ -0.25
ZNF250-209ENST00000533543 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
ZNF250-209ENST00000533543 POTEAQ6S8J7 498 aa13.46□□□□□ -0.25
ZNF250-209ENST00000533543 HIRIP3Q9BW71 556 aaPredicted RBP13.46□□□□□ -0.25
ZNF250-209ENST00000533543 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
ZNF250-209ENST00000533543 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
ZNF250-209ENST00000533543 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
ZNF250-209ENST00000533543 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
ZNF250-209ENST00000533543 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
ZNF250-209ENST00000533543 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
ZNF250-209ENST00000533543 PXDNQ92626 1479 aa13.42□□□□□ -0.26
ZNF250-209ENST00000533543 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
ZNF250-209ENST00000533543 ADGRB2O60241 1585 aa13.41□□□□□ -0.26
ZNF250-209ENST00000533543 ANKARQ7Z5J8 1434 aa13.4□□□□□ -0.26
ZNF250-209ENST00000533543 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
ZNF250-209ENST00000533543 ADAMTS2O95450 1211 aa13.4□□□□□ -0.26
ZNF250-209ENST00000533543 ZNF772Q68DY9 489 aaPredicted RBP13.4□□□□□ -0.26
ZNF250-209ENST00000533543 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
ZNF250-209ENST00000533543 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
ZNF250-209ENST00000533543 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
ZNF250-209ENST00000533543 ARHGEF28Q8N1W1 1705 aaKnown RBP13.39□□□□□ -0.27
ZNF250-209ENST00000533543 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
ZNF250-209ENST00000533543 KRT28Q7Z3Y7 464 aa13.39□□□□□ -0.27
ZNF250-209ENST00000533543 PMFBP1Q8TBY8 1022 aa13.39□□□□□ -0.27
ZNF250-209ENST00000533543 KIF1AQ12756 1690 aa13.39□□□□□ -0.27
ZNF250-209ENST00000533543 AFF2P51816 1311 aa13.39□□□□□ -0.27
ZNF250-209ENST00000533543 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
ZNF250-209ENST00000533543 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
ZNF250-209ENST00000533543 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
ZNF250-209ENST00000533543 TULP4Q9NRJ4 1543 aa13.37□□□□□ -0.27
ZNF250-209ENST00000533543 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
ZNF250-209ENST00000533543 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
ZNF250-209ENST00000533543 PSME1Q06323 249 aa13.35□□□□□ -0.27
ZNF250-209ENST00000533543 NGLY1Q96IV0 654 aa13.35□□□□□ -0.27
ZNF250-209ENST00000533543 CDK19Q9BWU1 502 aa13.35□□□□□ -0.27
ZNF250-209ENST00000533543 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
ZNF250-209ENST00000533543 NUDT16Q96DE0 195 aaKnown RBP13.34□□□□□ -0.27
ZNF250-209ENST00000533543 CENPJQ9HC77 1338 aaPredicted RBP13.34□□□□□ -0.27
ZNF250-209ENST00000533543 SBNO1A3KN83 1393 aa13.33□□□□□ -0.27
ZNF250-209ENST00000533543 ROCK2O75116 1388 aaKnown RBP13.33□□□□□ -0.27
ZNF250-209ENST00000533543 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
ZNF250-209ENST00000533543 NBPF8Q3BBV2 869 aa13.33□□□□□ -0.28
ZNF250-209ENST00000533543 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms