RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PPLO60437 1756 aa13.04□□□□□ -0.32
COPB1-210ENST00000533533 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
COPB1-210ENST00000533533 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
COPB1-210ENST00000533533 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
COPB1-210ENST00000533533 EP400Q96L91 3159 aa13.01□□□□□ -0.33
COPB1-210ENST00000533533 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
COPB1-210ENST00000533533 FNBP4Q8N3X1 1017 aaPredicted RBP12.99□□□□□ -0.33
COPB1-210ENST00000533533 USP21Q9UK80 565 aa12.99□□□□□ -0.33
COPB1-210ENST00000533533 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
COPB1-210ENST00000533533 NPHP3Q7Z494 1330 aa12.98□□□□□ -0.33
COPB1-210ENST00000533533 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
COPB1-210ENST00000533533 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
COPB1-210ENST00000533533 MYOM2P54296 1465 aa12.97□□□□□ -0.33
COPB1-210ENST00000533533 ATRNO75882 1429 aa12.96□□□□□ -0.33
COPB1-210ENST00000533533 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.33
COPB1-210ENST00000533533 ATAD2Q6PL18 1390 aa12.96□□□□□ -0.33
COPB1-210ENST00000533533 ADGRF5Q8IZF2 1346 aa12.96□□□□□ -0.33
COPB1-210ENST00000533533 PXDNQ92626 1479 aa12.96□□□□□ -0.34
COPB1-210ENST00000533533 FOXO3O43524 673 aa12.95□□□□□ -0.34
COPB1-210ENST00000533533 CCDC144AA2RUR9 1427 aa12.95□□□□□ -0.34
COPB1-210ENST00000533533 TECPR2O15040 1411 aa12.95□□□□□ -0.34
COPB1-210ENST00000533533 IFT172Q9UG01 1749 aa12.94□□□□□ -0.34
COPB1-210ENST00000533533 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
COPB1-210ENST00000533533 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
COPB1-210ENST00000533533 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
COPB1-210ENST00000533533 STK26Q9P289 416 aa12.94□□□□□ -0.34
COPB1-210ENST00000533533 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
COPB1-210ENST00000533533 BCL9LQ86UU0 1499 aa12.93□□□□□ -0.34
COPB1-210ENST00000533533 PPP4R3CPQ6ZMV5 832 aa12.93□□□□□ -0.34
COPB1-210ENST00000533533 SPATA31E1Q6ZUB1 1445 aa12.93□□□□□ -0.34
COPB1-210ENST00000533533 KNDC1Q76NI1 1749 aa12.93□□□□□ -0.34
COPB1-210ENST00000533533 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
COPB1-210ENST00000533533 ANKRD30BQ9BXX2 1392 aa12.93□□□□□ -0.34
COPB1-210ENST00000533533 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
COPB1-210ENST00000533533 TMEM132EQ6IEE7 984 aa12.91□□□□□ -0.34
COPB1-210ENST00000533533 PLEKHH1Q9ULM0 1364 aa12.91□□□□□ -0.34
COPB1-210ENST00000533533 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
COPB1-210ENST00000533533 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
COPB1-210ENST00000533533 MPHOSPH9Q99550 1183 aa12.9□□□□□ -0.34
COPB1-210ENST00000533533 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.9□□□□□ -0.34
COPB1-210ENST00000533533 GJD4Q96KN9 370 aaPredicted RBP12.89□□□□□ -0.35
COPB1-210ENST00000533533 KIF1AQ12756 1690 aa12.89□□□□□ -0.35
COPB1-210ENST00000533533 RGPD8O14715 1765 aaPredicted RBP12.89□□□□□ -0.35
COPB1-210ENST00000533533 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
COPB1-210ENST00000533533 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
COPB1-210ENST00000533533 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
COPB1-210ENST00000533533 UNC5CLQ8IV45 518 aa12.87□□□□□ -0.35
COPB1-210ENST00000533533 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
COPB1-210ENST00000533533 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
COPB1-210ENST00000533533 SLIT2O94813 1529 aa12.87□□□□□ -0.35
COPB1-210ENST00000533533 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
COPB1-210ENST00000533533 RALGAPBQ86X10 1494 aa12.85□□□□□ -0.35
COPB1-210ENST00000533533 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
COPB1-210ENST00000533533 C14orf93Q9H972 538 aaKnown RBP12.85□□□□□ -0.35
COPB1-210ENST00000533533 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
COPB1-210ENST00000533533 GLI3P10071 1580 aa12.85□□□□□ -0.35
COPB1-210ENST00000533533 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
COPB1-210ENST00000533533 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
COPB1-210ENST00000533533 PSME1Q06323 249 aa12.83□□□□□ -0.36
COPB1-210ENST00000533533 NRXN1Q9ULB1 1477 aa12.83□□□□□ -0.36
COPB1-210ENST00000533533 DHX57Q6P158 1386 aaKnown RBP12.82□□□□□ -0.36
COPB1-210ENST00000533533 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
COPB1-210ENST00000533533 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
COPB1-210ENST00000533533 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
COPB1-210ENST00000533533 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
COPB1-210ENST00000533533 PRAM1Q96QH2 718 aa12.81□□□□□ -0.36
COPB1-210ENST00000533533 ACIN1Q9UKV3 1341 aaKnown RBP12.81□□□□□ -0.36
COPB1-210ENST00000533533 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
COPB1-210ENST00000533533 RAB3GAP2Q9H2M9 1393 aa12.81□□□□□ -0.36
COPB1-210ENST00000533533 BLMP54132 1417 aaPredicted RBP12.8□□□□□ -0.36
COPB1-210ENST00000533533 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
COPB1-210ENST00000533533 ABCA3Q99758 1704 aa12.8□□□□□ -0.36
COPB1-210ENST00000533533 SAFB2Q14151 953 aaKnown RBP eCLIP12.8□□□□□ -0.36
COPB1-210ENST00000533533 VPS72Q15906 364 aa12.8□□□□□ -0.36
COPB1-210ENST00000533533 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
COPB1-210ENST00000533533 SEPT12Q8IYM1 358 aa12.79□□□□□ -0.36
COPB1-210ENST00000533533 ARHGEF10O15013 1369 aa12.79□□□□□ -0.36
COPB1-210ENST00000533533 DLC1Q96QB1 1528 aa12.78□□□□□ -0.36
COPB1-210ENST00000533533 ONECUT3O60422 494 aaPredicted RBP12.78□□□□□ -0.36
COPB1-210ENST00000533533 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
COPB1-210ENST00000533533 POGKQ9P215 609 aa12.78□□□□□ -0.36
COPB1-210ENST00000533533 ANKARQ7Z5J8 1434 aa12.78□□□□□ -0.36
COPB1-210ENST00000533533 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
COPB1-210ENST00000533533 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
COPB1-210ENST00000533533 CCDC9Q9Y3X0 531 aaKnown RBP12.77□□□□□ -0.37
COPB1-210ENST00000533533 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
COPB1-210ENST00000533533 SF3B2Q13435 895 aaKnown RBP12.76□□□□□ -0.37
COPB1-210ENST00000533533 ADGRB2O60241 1585 aa12.76□□□□□ -0.37
COPB1-210ENST00000533533 ADGRB1O14514 1584 aa12.75□□□□□ -0.37
COPB1-210ENST00000533533 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
COPB1-210ENST00000533533 TRPM3Q9HCF6 1732 aaPredicted RBP12.75□□□□□ -0.37
COPB1-210ENST00000533533 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
COPB1-210ENST00000533533 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
COPB1-210ENST00000533533 TRIM26Q12899 539 aaPredicted RBP12.73□□□□□ -0.37
COPB1-210ENST00000533533 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
COPB1-210ENST00000533533 TRAK1Q9UPV9 953 aa12.73□□□□□ -0.37
COPB1-210ENST00000533533 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
COPB1-210ENST00000533533 GPRASP1Q5JY77 1395 aa12.72□□□□□ -0.37
COPB1-210ENST00000533533 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
COPB1-210ENST00000533533 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms