RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 COL16A1Q07092 1604 aaPredicted RBP14.31□□□□□ -0.12
NUP98-220ENST00000533346 BRINP3Q76B58 766 aa14.3□□□□□ -0.12
NUP98-220ENST00000533346 C1orf167Q5SNV9 1468 aa14.3□□□□□ -0.12
NUP98-220ENST00000533346 KDM2AQ9Y2K7 1162 aa14.28□□□□□ -0.12
NUP98-220ENST00000533346 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.12
NUP98-220ENST00000533346 ADGRB2O60241 1585 aa14.27□□□□□ -0.12
NUP98-220ENST00000533346 WAPLQ7Z5K2 1190 aa14.27□□□□□ -0.13
NUP98-220ENST00000533346 SHPRHQ149N8 1683 aa14.26□□□□□ -0.13
NUP98-220ENST00000533346 PLEKHH1Q9ULM0 1364 aa14.26□□□□□ -0.13
NUP98-220ENST00000533346 STK26Q9P289 416 aa14.26□□□□□ -0.13
NUP98-220ENST00000533346 JCADQ9P266 1359 aa14.25□□□□□ -0.13
NUP98-220ENST00000533346 ARHGEF28Q8N1W1 1705 aaKnown RBP14.25□□□□□ -0.13
NUP98-220ENST00000533346 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
NUP98-220ENST00000533346 SIN3AQ96ST3 1273 aa14.24□□□□□ -0.13
NUP98-220ENST00000533346 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
NUP98-220ENST00000533346 POTEAQ6S8J7 498 aa14.22□□□□□ -0.13
NUP98-220ENST00000533346 PRAM1Q96QH2 718 aa14.22□□□□□ -0.13
NUP98-220ENST00000533346 TRPM1Q7Z4N2 1603 aa14.22□□□□□ -0.13
NUP98-220ENST00000533346 SPATA31A6Q5VVP1 1343 aa14.21□□□□□ -0.13
NUP98-220ENST00000533346 KIF1AQ12756 1690 aa14.21□□□□□ -0.13
NUP98-220ENST00000533346 LRRC59Q96AG4 307 aaKnown RBP14.21□□□□□ -0.13
NUP98-220ENST00000533346 RGPD8O14715 1765 aaPredicted RBP14.21□□□□□ -0.13
NUP98-220ENST00000533346 ORAI2Q96SN7 254 aa14.2□□□□□ -0.14
NUP98-220ENST00000533346 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
NUP98-220ENST00000533346 POGKQ9P215 609 aa14.19□□□□□ -0.14
NUP98-220ENST00000533346 TRAK1Q9UPV9 953 aa14.19□□□□□ -0.14
NUP98-220ENST00000533346 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
NUP98-220ENST00000533346 CLSPNQ9HAW4 1339 aa14.18□□□□□ -0.14
NUP98-220ENST00000533346 EIF3AQ14152 1382 aaKnown RBP14.18□□□□□ -0.14
NUP98-220ENST00000533346 NPHP3Q7Z494 1330 aa14.17□□□□□ -0.14
NUP98-220ENST00000533346 COL22A1Q8NFW1 1626 aaPredicted RBP14.17□□□□□ -0.14
NUP98-220ENST00000533346 NBPF1Q3BBV0 1214 aa14.17□□□□□ -0.14
NUP98-220ENST00000533346 GPRASP1Q5JY77 1395 aa14.17□□□□□ -0.14
NUP98-220ENST00000533346 PXDNQ92626 1479 aa14.17□□□□□ -0.14
NUP98-220ENST00000533346 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
NUP98-220ENST00000533346 ESCO1Q5FWF5 840 aa14.16□□□□□ -0.14
NUP98-220ENST00000533346 TULP4Q9NRJ4 1543 aa14.15□□□□□ -0.14
NUP98-220ENST00000533346 WASLO00401 505 aaPredicted RBP14.15□□□□□ -0.14
NUP98-220ENST00000533346 PNPLA6Q8IY17 1366 aa14.14□□□□□ -0.15
NUP98-220ENST00000533346 ITSN1Q15811 1721 aa14.13□□□□□ -0.15
NUP98-220ENST00000533346 TIMELESSQ9UNS1 1208 aa14.13□□□□□ -0.15
NUP98-220ENST00000533346 LRP6O75581 1613 aa14.12□□□□□ -0.15
NUP98-220ENST00000533346 DDX17Q92841 729 aaKnown RBP14.12□□□□□ -0.15
NUP98-220ENST00000533346 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
NUP98-220ENST00000533346 TONSLQ96HA7 1378 aa14.11□□□□□ -0.15
NUP98-220ENST00000533346 FOXO3O43524 673 aa14.11□□□□□ -0.15
NUP98-220ENST00000533346 SAFB2Q14151 953 aaKnown RBP eCLIP14.11□□□□□ -0.15
NUP98-220ENST00000533346 NBPF8Q3BBV2 869 aa14.11□□□□□ -0.15
NUP98-220ENST00000533346 TOPAZ1Q8N9V7 1692 aa14.1□□□□□ -0.15
NUP98-220ENST00000533346 ATP7BP35670 1465 aa14.1□□□□□ -0.15
NUP98-220ENST00000533346 RALGAPBQ86X10 1494 aa14.1□□□□□ -0.15
NUP98-220ENST00000533346 QRICH2Q9H0J4 1663 aa14.1□□□□□ -0.15
NUP98-220ENST00000533346 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
NUP98-220ENST00000533346 PRR36Q9H6K5 1346 aa14.1□□□□□ -0.15
NUP98-220ENST00000533346 CENPJQ9HC77 1338 aaPredicted RBP14.1□□□□□ -0.15
NUP98-220ENST00000533346 SBNO1A3KN83 1393 aa14.09□□□□□ -0.15
NUP98-220ENST00000533346 SPATA31A3Q5VYP0 1347 aa14.09□□□□□ -0.15
NUP98-220ENST00000533346 ROCK2O75116 1388 aaKnown RBP14.09□□□□□ -0.15
NUP98-220ENST00000533346 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
NUP98-220ENST00000533346 TRPM3Q9HCF6 1732 aaPredicted RBP14.08□□□□□ -0.16
NUP98-220ENST00000533346 MARF1Q9Y4F3 1742 aaKnown RBP14.08□□□□□ -0.16
NUP98-220ENST00000533346 NUTM2FA1L443 756 aa14.08□□□□□ -0.16
NUP98-220ENST00000533346 PSME1Q06323 249 aa14.08□□□□□ -0.16
NUP98-220ENST00000533346 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
NUP98-220ENST00000533346 HIRIP3Q9BW71 556 aaPredicted RBP14.07□□□□□ -0.16
NUP98-220ENST00000533346 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
NUP98-220ENST00000533346 PCGF6Q9BYE7 350 aa14.07□□□□□ -0.16
NUP98-220ENST00000533346 PLEKHG3A1L390 1219 aa14.06□□□□□ -0.16
NUP98-220ENST00000533346 NUDT16Q96DE0 195 aaKnown RBP14.06□□□□□ -0.16
NUP98-220ENST00000533346 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
NUP98-220ENST00000533346 ALS2Q96Q42 1657 aa14.06□□□□□ -0.16
NUP98-220ENST00000533346 POLR3AO14802 1390 aaPredicted RBP14.06□□□□□ -0.16
NUP98-220ENST00000533346 TNS3Q68CZ2 1445 aa14.05□□□□□ -0.16
NUP98-220ENST00000533346 ZNF772Q68DY9 489 aaPredicted RBP14.04□□□□□ -0.16
NUP98-220ENST00000533346 ARHGEF10O15013 1369 aa14.03□□□□□ -0.16
NUP98-220ENST00000533346 BRD4O60885 1362 aaPredicted RBP14.03□□□□□ -0.16
NUP98-220ENST00000533346 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
NUP98-220ENST00000533346 PUS7Q96PZ0 661 aaKnown RBP14.02□□□□□ -0.17
NUP98-220ENST00000533346 EVC2Q86UK5 1308 aa14.01□□□□□ -0.17
NUP98-220ENST00000533346 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
NUP98-220ENST00000533346 FNBP4Q8N3X1 1017 aaPredicted RBP14.01□□□□□ -0.17
NUP98-220ENST00000533346 CARD11Q9BXL7 1154 aa14.01□□□□□ -0.17
NUP98-220ENST00000533346 ABCA3Q99758 1704 aa14.01□□□□□ -0.17
NUP98-220ENST00000533346 CRYBG1Q9Y4K1 1723 aa14.01□□□□□ -0.17
NUP98-220ENST00000533346 XPCQ01831 940 aaPredicted RBP14□□□□□ -0.17
NUP98-220ENST00000533346 MEX3CQ5U5Q3 659 aaKnown RBP14□□□□□ -0.17
NUP98-220ENST00000533346 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.99□□□□□ -0.17
NUP98-220ENST00000533346 NUTM2BA6NNL0 878 aaPredicted RBP13.99□□□□□ -0.17
NUP98-220ENST00000533346 NUTM2EB1AL46 878 aaPredicted RBP13.99□□□□□ -0.17
NUP98-220ENST00000533346 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
NUP98-220ENST00000533346 UPF1Q92900 1129 aaKnown RBP eCLIP13.99□□□□□ -0.173e-7■■■□□ 17.5
NUP98-220ENST00000533346 ACEP12821 1306 aa13.98□□□□□ -0.17
NUP98-220ENST00000533346 NGDNQ8NEJ9 315 aaKnown RBP13.98□□□□□ -0.17
NUP98-220ENST00000533346 CDK12Q9NYV4 1490 aaPredicted RBP13.98□□□□□ -0.17
NUP98-220ENST00000533346 PPIP5K1Q6PFW1 1433 aa13.98□□□□□ -0.17
NUP98-220ENST00000533346 AFF2P51816 1311 aa13.97□□□□□ -0.17
NUP98-220ENST00000533346 SRPK2P78362 688 aaKnown RBP13.97□□□□□ -0.17
NUP98-220ENST00000533346 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
NUP98-220ENST00000533346 AKAP12Q02952 1782 aa13.96□□□□□ -0.17
NUP98-220ENST00000533346 SLIT2O94813 1529 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms