RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 BCL9LQ86UU0 1499 aa15.42■□□□□ 0.06
ATG13-220ENST00000533316 PLEKHG5O94827 1062 aa15.42■□□□□ 0.06
ATG13-220ENST00000533316 FOXD1Q16676 465 aa15.42■□□□□ 0.06
ATG13-220ENST00000533316 WAPLQ7Z5K2 1190 aa15.42■□□□□ 0.06
ATG13-220ENST00000533316 STK26Q9P289 416 aa15.42■□□□□ 0.06
ATG13-220ENST00000533316 ZRANB1Q9UGI0 708 aa15.42■□□□□ 0.06
ATG13-220ENST00000533316 MYOM2P54296 1465 aa15.41■□□□□ 0.06
ATG13-220ENST00000533316 EP400Q96L91 3159 aa15.4■□□□□ 0.06
ATG13-220ENST00000533316 NAIPQ13075 1403 aa15.4■□□□□ 0.06
ATG13-220ENST00000533316 PXDNQ92626 1479 aa15.4■□□□□ 0.06
ATG13-220ENST00000533316 COL22A1Q8NFW1 1626 aaPredicted RBP15.39■□□□□ 0.05
ATG13-220ENST00000533316 ADGRF5Q8IZF2 1346 aa15.39■□□□□ 0.05
ATG13-220ENST00000533316 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
ATG13-220ENST00000533316 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
ATG13-220ENST00000533316 NPHP3Q7Z494 1330 aa15.38■□□□□ 0.05
ATG13-220ENST00000533316 PLEKHH1Q9ULM0 1364 aa15.37■□□□□ 0.05
ATG13-220ENST00000533316 TMEM132EQ6IEE7 984 aa15.37■□□□□ 0.05
ATG13-220ENST00000533316 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
ATG13-220ENST00000533316 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
ATG13-220ENST00000533316 DEFB132Q7Z7B7 95 aa15.36■□□□□ 0.05
ATG13-220ENST00000533316 PPLO60437 1756 aa15.36■□□□□ 0.05
ATG13-220ENST00000533316 RPGRIP1LQ68CZ1 1315 aa15.35■□□□□ 0.05
ATG13-220ENST00000533316 CABLES1Q8TDN4 633 aa15.34■□□□□ 0.05
ATG13-220ENST00000533316 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
ATG13-220ENST00000533316 PRAG1Q86YV5 1406 aa15.34■□□□□ 0.05
ATG13-220ENST00000533316 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.05
ATG13-220ENST00000533316 GLI3P10071 1580 aa15.33■□□□□ 0.05
ATG13-220ENST00000533316 CDC42BPGQ6DT37 1551 aa15.33■□□□□ 0.05
ATG13-220ENST00000533316 UNC5CLQ8IV45 518 aa15.33■□□□□ 0.04
ATG13-220ENST00000533316 KRT28Q7Z3Y7 464 aa15.31■□□□□ 0.04
ATG13-220ENST00000533316 CCDC125Q86Z20 511 aa15.31■□□□□ 0.04
ATG13-220ENST00000533316 SPATA31A3Q5VYP0 1347 aa15.31■□□□□ 0.04
ATG13-220ENST00000533316 BRWD3Q6RI45 1802 aa15.31■□□□□ 0.04
ATG13-220ENST00000533316 RRBP1Q9P2E9 1410 aaKnown RBP15.3■□□□□ 0.04
ATG13-220ENST00000533316 SLIT2O94813 1529 aa15.29■□□□□ 0.04
ATG13-220ENST00000533316 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
ATG13-220ENST00000533316 LRPPRCP42704 1394 aaKnown RBP15.28■□□□□ 0.04
ATG13-220ENST00000533316 LMOD2Q6P5Q4 547 aa15.28■□□□□ 0.04
ATG13-220ENST00000533316 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
ATG13-220ENST00000533316 BLMP54132 1417 aaPredicted RBP15.27■□□□□ 0.04
ATG13-220ENST00000533316 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.04
ATG13-220ENST00000533316 SAFB2Q14151 953 aaKnown RBP eCLIP15.27■□□□□ 0.04
ATG13-220ENST00000533316 RGPD8O14715 1765 aaPredicted RBP15.26■□□□□ 0.03
ATG13-220ENST00000533316 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.26■□□□□ 0.03
ATG13-220ENST00000533316 PSDA5PKW4 1024 aaPredicted RBP15.26■□□□□ 0.03
ATG13-220ENST00000533316 FMN2Q9NZ56 1722 aa15.26■□□□□ 0.03
ATG13-220ENST00000533316 TECPR2O15040 1411 aa15.26■□□□□ 0.03
ATG13-220ENST00000533316 ABCC11Q96J66 1382 aa15.25■□□□□ 0.03
ATG13-220ENST00000533316 USP32Q8NFA0 1604 aa15.25■□□□□ 0.03
ATG13-220ENST00000533316 PHF8Q9UPP1 1060 aa15.24■□□□□ 0.03
ATG13-220ENST00000533316 CCDC144AA2RUR9 1427 aa15.24■□□□□ 0.03
ATG13-220ENST00000533316 SPATA31E1Q6ZUB1 1445 aa15.24■□□□□ 0.03
ATG13-220ENST00000533316 YTHDC2Q9H6S0 1430 aaKnown RBP15.24■□□□□ 0.03
ATG13-220ENST00000533316 A0A0G2JS52 829 aa15.23■□□□□ 0.03
ATG13-220ENST00000533316 FAM83GA6ND36 823 aa15.23■□□□□ 0.03
ATG13-220ENST00000533316 MYT1Q01538 1121 aa15.23■□□□□ 0.03
ATG13-220ENST00000533316 SF3B2Q13435 895 aaKnown RBP15.23■□□□□ 0.03
ATG13-220ENST00000533316 VPS72Q15906 364 aa15.23■□□□□ 0.03
ATG13-220ENST00000533316 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
ATG13-220ENST00000533316 PMFBP1Q8TBY8 1022 aa15.23■□□□□ 0.03
ATG13-220ENST00000533316 CFAP70Q5T0N1 1121 aa15.22■□□□□ 0.03
ATG13-220ENST00000533316 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
ATG13-220ENST00000533316 TNS3Q68CZ2 1445 aa15.22■□□□□ 0.03
ATG13-220ENST00000533316 IFT172Q9UG01 1749 aa15.21■□□□□ 0.03
ATG13-220ENST00000533316 PIK3C2GO75747 1445 aa15.21■□□□□ 0.03
ATG13-220ENST00000533316 MPHOSPH9Q99550 1183 aa15.21■□□□□ 0.03
ATG13-220ENST00000533316 KIF1AQ12756 1690 aa15.21■□□□□ 0.03
ATG13-220ENST00000533316 PLCH1Q4KWH8 1693 aa15.21■□□□□ 0.03
ATG13-220ENST00000533316 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
ATG13-220ENST00000533316 PSME1Q06323 249 aa15.2■□□□□ 0.02
ATG13-220ENST00000533316 FAM98CQ17RN3 349 aaKnown RBP15.2■□□□□ 0.02
ATG13-220ENST00000533316 PRAM1Q96QH2 718 aa15.2■□□□□ 0.02
ATG13-220ENST00000533316 ANKRD30BQ9BXX2 1392 aa15.2■□□□□ 0.02
ATG13-220ENST00000533316 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
ATG13-220ENST00000533316 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
ATG13-220ENST00000533316 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
ATG13-220ENST00000533316 HIRIP3Q9BW71 556 aaPredicted RBP15.17■□□□□ 0.02
ATG13-220ENST00000533316 C14orf93Q9H972 538 aaKnown RBP15.17■□□□□ 0.02
ATG13-220ENST00000533316 BTG4Q9NY30 223 aa15.17■□□□□ 0.02
ATG13-220ENST00000533316 NRXN1Q9ULB1 1477 aa15.16■□□□□ 0.02
ATG13-220ENST00000533316 HRCP23327 699 aa15.16■□□□□ 0.02
ATG13-220ENST00000533316 SBNO1A3KN83 1393 aa15.15■□□□□ 0.02
ATG13-220ENST00000533316 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
ATG13-220ENST00000533316 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
ATG13-220ENST00000533316 POGKQ9P215 609 aa15.14■□□□□ 0.01
ATG13-220ENST00000533316 DHX57Q6P158 1386 aaKnown RBP15.13■□□□□ 0.01
ATG13-220ENST00000533316 BAG6P46379 1132 aa15.13■□□□□ 0.01
ATG13-220ENST00000533316 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
ATG13-220ENST00000533316 ARHGEF10O15013 1369 aa15.12■□□□□ 0.01
ATG13-220ENST00000533316 NRAPQ86VF7 1730 aa15.12■□□□□ 0.01
ATG13-220ENST00000533316 TRAK1Q9UPV9 953 aa15.12■□□□□ 0.01
ATG13-220ENST00000533316 LRP5O75197 1615 aa15.12■□□□□ 0.01
ATG13-220ENST00000533316 MINK1Q8N4C8 1332 aaPredicted RBP15.12■□□□□ 0.01
ATG13-220ENST00000533316 PRR36Q9H6K5 1346 aa15.12■□□□□ 0.01
ATG13-220ENST00000533316 EZH2Q15910 746 aaKnown RBP15.1■□□□□ 0.01
ATG13-220ENST00000533316 TRPM3Q9HCF6 1732 aaPredicted RBP15.09■□□□□ 0.01
ATG13-220ENST00000533316 PAK3O75914 559 aaPredicted RBP15.09■□□□□ 0.01
ATG13-220ENST00000533316 CHRNA2Q15822 529 aa15.08■□□□□ 0
ATG13-220ENST00000533316 SPATA31A5Q5VU36 1347 aa15.08■□□□□ 0
ATG13-220ENST00000533316 SPATA31A7Q8IWB4 1347 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms