RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
C11orf54-212ENST00000533154 SCUBE3Q8IX30 993 aa9.5□□□□□ -0.89
C11orf54-212ENST00000533154 MLLT3P42568 568 aaPredicted RBP9.49□□□□□ -0.89
C11orf54-212ENST00000533154 PUS10Q3MIT2 529 aaKnown RBP9.49□□□□□ -0.89
C11orf54-212ENST00000533154 RBM26Q5T8P6 1007 aaKnown RBP9.49□□□□□ -0.89
C11orf54-212ENST00000533154 ATP13A2Q9NQ11 1180 aa9.49□□□□□ -0.89
C11orf54-212ENST00000533154 RCCD1A6NED2 376 aa9.48□□□□□ -0.89
C11orf54-212ENST00000533154 SLC10A3P09131 477 aa9.48□□□□□ -0.89
C11orf54-212ENST00000533154 FCF1Q9Y324 198 aaKnown RBP9.48□□□□□ -0.89
C11orf54-212ENST00000533154 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
C11orf54-212ENST00000533154 TRIM47Q96LD4 638 aa9.45□□□□□ -0.9
C11orf54-212ENST00000533154 SENP2Q9HC62 589 aa9.45□□□□□ -0.9
C11orf54-212ENST00000533154 ADGRG1Q9Y653 693 aa9.45□□□□□ -0.9
C11orf54-212ENST00000533154 KRI1Q8N9T8 703 aaKnown RBP9.44□□□□□ -0.9
C11orf54-212ENST00000533154 KDM4CQ9H3R0 1056 aa9.44□□□□□ -0.9
C11orf54-212ENST00000533154 GPBP1L1Q9HC44 474 aaPredicted RBP9.44□□□□□ -0.9
C11orf54-212ENST00000533154 TRIM66O15016 1216 aa9.42□□□□□ -0.9
C11orf54-212ENST00000533154 SMPD1P17405 629 aa9.42□□□□□ -0.9
C11orf54-212ENST00000533154 PDE4DQ08499 809 aa9.41□□□□□ -0.9
C11orf54-212ENST00000533154 NACADO15069 1562 aa9.41□□□□□ -0.9
C11orf54-212ENST00000533154 GPR37O15354 613 aa9.4□□□□□ -0.9
C11orf54-212ENST00000533154 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
C11orf54-212ENST00000533154 SUPT5HO00267 1087 aaKnown RBP9.39□□□□□ -0.91
C11orf54-212ENST00000533154 ZBTB24O43167 697 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-212ENST00000533154 PTGDRQ13258 359 aa9.39□□□□□ -0.91
C11orf54-212ENST00000533154 ZSCAN1Q8NBB4 408 aa9.39□□□□□ -0.91
C11orf54-212ENST00000533154 SNIP1Q8TAD8 396 aaKnown RBP9.39□□□□□ -0.91
C11orf54-212ENST00000533154 GMPRP36959 345 aa9.38□□□□□ -0.91
C11orf54-212ENST00000533154 KIFC2Q96AC6 838 aa9.37□□□□□ -0.91
C11orf54-212ENST00000533154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.36□□□□□ -0.91
C11orf54-212ENST00000533154 J3QL48 77 aa9.36□□□□□ -0.91
C11orf54-212ENST00000533154 SUZ12Q15022 739 aaKnown RBP9.36□□□□□ -0.91
C11orf54-212ENST00000533154 RSPH4AQ5TD94 716 aa9.36□□□□□ -0.91
C11orf54-212ENST00000533154 IL27Q8NEV9 243 aa9.36□□□□□ -0.91
C11orf54-212ENST00000533154 PRDM9Q9NQV7 894 aa9.36□□□□□ -0.91
C11orf54-212ENST00000533154 WNT7AO00755 349 aa9.35□□□□□ -0.91
C11orf54-212ENST00000533154 FAM160A2Q8N612 972 aaPredicted RBP9.35□□□□□ -0.91
C11orf54-212ENST00000533154 MINK1Q8N4C8 1332 aaPredicted RBP9.34□□□□□ -0.91
C11orf54-212ENST00000533154 HPS1Q92902 700 aa9.34□□□□□ -0.91
C11orf54-212ENST00000533154 FMNL1O95466 1100 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-212ENST00000533154 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-212ENST00000533154 MAP2K5Q13163 448 aa9.33□□□□□ -0.92
C11orf54-212ENST00000533154 THAP11Q96EK4 314 aa9.33□□□□□ -0.92
C11orf54-212ENST00000533154 ZMYND15Q9H091 742 aa9.33□□□□□ -0.92
C11orf54-212ENST00000533154 UNC13AQ9UPW8 1703 aa9.33□□□□□ -0.92
C11orf54-212ENST00000533154 MORN1Q5T089 497 aa9.32□□□□□ -0.92
C11orf54-212ENST00000533154 MRGPRX2Q96LB1 330 aa9.32□□□□□ -0.92
C11orf54-212ENST00000533154 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
C11orf54-212ENST00000533154 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
C11orf54-212ENST00000533154 NUTM2FA1L443 756 aa9.31□□□□□ -0.92
C11orf54-212ENST00000533154 AMHR2Q16671 573 aa9.31□□□□□ -0.92
C11orf54-212ENST00000533154 IRF7Q92985 503 aa9.31□□□□□ -0.92
C11orf54-212ENST00000533154 VEGFBP49765 207 aa9.3□□□□□ -0.92
C11orf54-212ENST00000533154 RDH13Q8NBN7 331 aa9.3□□□□□ -0.92
C11orf54-212ENST00000533154 DDRGK1Q96HY6 314 aa9.3□□□□□ -0.92
C11orf54-212ENST00000533154 FUT2Q10981 343 aa9.29□□□□□ -0.92
C11orf54-212ENST00000533154 TRIM32Q13049 653 aa9.29□□□□□ -0.92
C11orf54-212ENST00000533154 CCDC102AQ96A19 550 aa9.29□□□□□ -0.92
C11orf54-212ENST00000533154 SLC27A5Q9Y2P5 690 aa9.29□□□□□ -0.92
C11orf54-212ENST00000533154 PXYLP1Q8TE99 480 aa9.28□□□□□ -0.92
C11orf54-212ENST00000533154 BICRAQ9NZM4 1560 aa9.28□□□□□ -0.92
C11orf54-212ENST00000533154 IRF6O14896 467 aa9.27□□□□□ -0.93
C11orf54-212ENST00000533154 FECHP22830 423 aa9.27□□□□□ -0.93
C11orf54-212ENST00000533154 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
C11orf54-212ENST00000533154 GNPATO15228 680 aa9.26□□□□□ -0.93
C11orf54-212ENST00000533154 ATP6V1AP38606 617 aa9.26□□□□□ -0.93
C11orf54-212ENST00000533154 HIC1Q14526 733 aa9.26□□□□□ -0.93
C11orf54-212ENST00000533154 OATP04181 439 aa9.25□□□□□ -0.93
C11orf54-212ENST00000533154 MYO15BQ96JP2 1530 aa9.25□□□□□ -0.93
C11orf54-212ENST00000533154 PLEKHG3A1L390 1219 aa9.24□□□□□ -0.93
C11orf54-212ENST00000533154 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
C11orf54-212ENST00000533154 PARP9Q8IXQ6 854 aa9.24□□□□□ -0.93
C11orf54-212ENST00000533154 REPIN1Q9BWE0 567 aaKnown RBP9.24□□□□□ -0.93
C11orf54-212ENST00000533154 GOPCQ9HD26 462 aa9.24□□□□□ -0.93
C11orf54-212ENST00000533154 FCHSD2O94868 740 aa9.23□□□□□ -0.93
C11orf54-212ENST00000533154 BMP1P13497 986 aa9.23□□□□□ -0.93
C11orf54-212ENST00000533154 MSS51Q4VC12 460 aa9.23□□□□□ -0.93
C11orf54-212ENST00000533154 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
C11orf54-212ENST00000533154 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
C11orf54-212ENST00000533154 RNF19BQ6ZMZ0 732 aa9.22□□□□□ -0.93
C11orf54-212ENST00000533154 NPAS3Q8IXF0 933 aa9.22□□□□□ -0.93
C11orf54-212ENST00000533154 H3BM21 787 aa9.21□□□□□ -0.94
C11orf54-212ENST00000533154 FLIIQ13045 1269 aa9.21□□□□□ -0.94
C11orf54-212ENST00000533154 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
C11orf54-212ENST00000533154 SALL2Q9Y467 1007 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-212ENST00000533154 KCTD17Q8N5Z5 321 aa9.2□□□□□ -0.94
C11orf54-212ENST00000533154 ALDH1A1P00352 501 aa9.19□□□□□ -0.94
C11orf54-212ENST00000533154 RC3H1Q5TC82 1133 aaKnown RBP9.19□□□□□ -0.94
C11orf54-212ENST00000533154 TRIM46Q7Z4K8 759 aa9.18□□□□□ -0.94
C11orf54-212ENST00000533154 UBTFP17480 764 aaKnown RBP9.16□□□□□ -0.94
C11orf54-212ENST00000533154 GCGRP47871 477 aa9.16□□□□□ -0.94
C11orf54-212ENST00000533154 CCDC24Q8N4L8 307 aa9.16□□□□□ -0.94
C11orf54-212ENST00000533154 SKOR1P84550 965 aa9.15□□□□□ -0.94
C11orf54-212ENST00000533154 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
C11orf54-212ENST00000533154 NLRP7Q8WX94 980 aa9.15□□□□□ -0.94
C11orf54-212ENST00000533154 CAPN5O15484 640 aaPredicted RBP9.14□□□□□ -0.95
C11orf54-212ENST00000533154 MMP16P51512 607 aa9.14□□□□□ -0.95
C11orf54-212ENST00000533154 WNT7BP56706 349 aa9.12□□□□□ -0.95
C11orf54-212ENST00000533154 KCNMA1Q12791 1236 aa9.12□□□□□ -0.95
C11orf54-212ENST00000533154 GIGYF2Q6Y7W6 1299 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms