RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CDC42BPGQ6DT37 1551 aa18.75■□□□□ 0.59
TRAPPC4-212ENST00000533058 SPATA31A6Q5VVP1 1343 aa18.74■□□□□ 0.59
TRAPPC4-212ENST00000533058 ADGRB1O14514 1584 aa18.74■□□□□ 0.59
TRAPPC4-212ENST00000533058 PLEKHH1Q9ULM0 1364 aa18.74■□□□□ 0.59
TRAPPC4-212ENST00000533058 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
TRAPPC4-212ENST00000533058 LRRC59Q96AG4 307 aaKnown RBP18.73■□□□□ 0.59
TRAPPC4-212ENST00000533058 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC4-212ENST00000533058 ORAI2Q96SN7 254 aa18.71■□□□□ 0.59
TRAPPC4-212ENST00000533058 NHSL1Q5SYE7 1610 aa18.71■□□□□ 0.58
TRAPPC4-212ENST00000533058 PRAM1Q96QH2 718 aa18.7■□□□□ 0.58
TRAPPC4-212ENST00000533058 SOS2Q07890 1332 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC4-212ENST00000533058 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC4-212ENST00000533058 NEUROD1Q13562 356 aa18.67■□□□□ 0.58
TRAPPC4-212ENST00000533058 ESCO1Q5FWF5 840 aa18.67■□□□□ 0.58
TRAPPC4-212ENST00000533058 POGKQ9P215 609 aa18.67■□□□□ 0.58
TRAPPC4-212ENST00000533058 RGS17Q9UGC6 210 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC4-212ENST00000533058 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
TRAPPC4-212ENST00000533058 TRAK1Q9UPV9 953 aa18.66■□□□□ 0.58
TRAPPC4-212ENST00000533058 NPHP3Q7Z494 1330 aa18.66■□□□□ 0.58
TRAPPC4-212ENST00000533058 SHPRHQ149N8 1683 aa18.66■□□□□ 0.58
TRAPPC4-212ENST00000533058 SIN3AQ96ST3 1273 aa18.65■□□□□ 0.58
TRAPPC4-212ENST00000533058 SOCS7O14512 581 aa18.64■□□□□ 0.57
TRAPPC4-212ENST00000533058 L3MBTL2Q969R5 705 aa18.64■□□□□ 0.57
TRAPPC4-212ENST00000533058 PNPLA6Q8IY17 1366 aa18.63■□□□□ 0.57
TRAPPC4-212ENST00000533058 KIAA1210Q9ULL0 1709 aa18.62■□□□□ 0.57
TRAPPC4-212ENST00000533058 FMN2Q9NZ56 1722 aa18.61■□□□□ 0.57
TRAPPC4-212ENST00000533058 LRP6O75581 1613 aa18.61■□□□□ 0.57
TRAPPC4-212ENST00000533058 SAFB2Q14151 953 aaKnown RBP eCLIP18.61■□□□□ 0.57
TRAPPC4-212ENST00000533058 ADGRB2O60241 1585 aa18.6■□□□□ 0.57
TRAPPC4-212ENST00000533058 ANKARQ7Z5J8 1434 aa18.6■□□□□ 0.57
TRAPPC4-212ENST00000533058 NUTM2FA1L443 756 aa18.6■□□□□ 0.57
TRAPPC4-212ENST00000533058 FOXO3O43524 673 aa18.6■□□□□ 0.57
TRAPPC4-212ENST00000533058 PXDNQ92626 1479 aa18.58■□□□□ 0.57
TRAPPC4-212ENST00000533058 EIF3AQ14152 1382 aaKnown RBP18.58■□□□□ 0.57
TRAPPC4-212ENST00000533058 NBPF1Q3BBV0 1214 aa18.58■□□□□ 0.56
TRAPPC4-212ENST00000533058 WASLO00401 505 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-212ENST00000533058 MEX3CQ5U5Q3 659 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-212ENST00000533058 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
TRAPPC4-212ENST00000533058 POTEAQ6S8J7 498 aa18.56■□□□□ 0.56
TRAPPC4-212ENST00000533058 MINK1Q8N4C8 1332 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-212ENST00000533058 KIF1AQ12756 1690 aa18.55■□□□□ 0.56
TRAPPC4-212ENST00000533058 ZNF772Q68DY9 489 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-212ENST00000533058 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC4-212ENST00000533058 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC4-212ENST00000533058 NUTM2AQ8IVF1 878 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC4-212ENST00000533058 HIRIP3Q9BW71 556 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC4-212ENST00000533058 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
TRAPPC4-212ENST00000533058 PSME1Q06323 249 aa18.53■□□□□ 0.56
TRAPPC4-212ENST00000533058 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
TRAPPC4-212ENST00000533058 ARHGEF28Q8N1W1 1705 aaKnown RBP18.53■□□□□ 0.56
TRAPPC4-212ENST00000533058 TONSLQ96HA7 1378 aa18.53■□□□□ 0.56
TRAPPC4-212ENST00000533058 SPATA31A3Q5VYP0 1347 aa18.52■□□□□ 0.56
TRAPPC4-212ENST00000533058 TULP4Q9NRJ4 1543 aa18.52■□□□□ 0.56
TRAPPC4-212ENST00000533058 PRR36Q9H6K5 1346 aa18.51■□□□□ 0.55
TRAPPC4-212ENST00000533058 XPCQ01831 940 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC4-212ENST00000533058 COL22A1Q8NFW1 1626 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC4-212ENST00000533058 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
TRAPPC4-212ENST00000533058 SBNO1A3KN83 1393 aa18.5■□□□□ 0.55
TRAPPC4-212ENST00000533058 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC4-212ENST00000533058 CDK19Q9BWU1 502 aa18.48■□□□□ 0.55
TRAPPC4-212ENST00000533058 PMFBP1Q8TBY8 1022 aa18.47■□□□□ 0.55
TRAPPC4-212ENST00000533058 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
TRAPPC4-212ENST00000533058 AFF2P51816 1311 aa18.47■□□□□ 0.55
TRAPPC4-212ENST00000533058 GPRASP1Q5JY77 1395 aa18.46■□□□□ 0.55
TRAPPC4-212ENST00000533058 RGPD8O14715 1765 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC4-212ENST00000533058 C8orf37Q96NL8 207 aa18.46■□□□□ 0.55
TRAPPC4-212ENST00000533058 TNS3Q68CZ2 1445 aa18.46■□□□□ 0.55
TRAPPC4-212ENST00000533058 ATP7BP35670 1465 aa18.46■□□□□ 0.54
TRAPPC4-212ENST00000533058 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
TRAPPC4-212ENST00000533058 ADAMTS2O95450 1211 aa18.45■□□□□ 0.54
TRAPPC4-212ENST00000533058 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
TRAPPC4-212ENST00000533058 FNBP4Q8N3X1 1017 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC4-212ENST00000533058 CCDC61Q9Y6R9 512 aa18.45■□□□□ 0.54
TRAPPC4-212ENST00000533058 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
TRAPPC4-212ENST00000533058 ARHGEF10O15013 1369 aa18.44■□□□□ 0.54
TRAPPC4-212ENST00000533058 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
TRAPPC4-212ENST00000533058 PLEKHG3A1L390 1219 aa18.43■□□□□ 0.54
TRAPPC4-212ENST00000533058 NGDNQ8NEJ9 315 aaKnown RBP18.42■□□□□ 0.54
TRAPPC4-212ENST00000533058 RXRBP28702 533 aa18.41■□□□□ 0.54
TRAPPC4-212ENST00000533058 POLR3AO14802 1390 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC4-212ENST00000533058 QTRT2Q9H974 415 aaKnown RBP18.4■□□□□ 0.54
TRAPPC4-212ENST00000533058 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC4-212ENST00000533058 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
TRAPPC4-212ENST00000533058 SRPK2P78362 688 aaKnown RBP18.38■□□□□ 0.53
TRAPPC4-212ENST00000533058 USP21Q9UK80 565 aa18.38■□□□□ 0.53
TRAPPC4-212ENST00000533058 ITSN1Q15811 1721 aa18.37■□□□□ 0.53
TRAPPC4-212ENST00000533058 TRPC5Q9UL62 973 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC4-212ENST00000533058 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
TRAPPC4-212ENST00000533058 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
TRAPPC4-212ENST00000533058 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
TRAPPC4-212ENST00000533058 RALGAPBQ86X10 1494 aa18.37■□□□□ 0.53
TRAPPC4-212ENST00000533058 ACEP12821 1306 aa18.36■□□□□ 0.53
TRAPPC4-212ENST00000533058 LMOD2Q6P5Q4 547 aa18.36■□□□□ 0.53
TRAPPC4-212ENST00000533058 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
TRAPPC4-212ENST00000533058 TRPM3Q9HCF6 1732 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC4-212ENST00000533058 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
TRAPPC4-212ENST00000533058 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
TRAPPC4-212ENST00000533058 TOPAZ1Q8N9V7 1692 aa18.34■□□□□ 0.53
TRAPPC4-212ENST00000533058 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC4-212ENST00000533058 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms