RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 FRMPD1Q5SYB0 1578 aa19.36■□□□□ 0.69
SSH3-210ENST00000532881 NRXN1Q9ULB1 1477 aa19.35■□□□□ 0.69
SSH3-210ENST00000532881 ADGRB3O60242 1522 aa19.35■□□□□ 0.69
SSH3-210ENST00000532881 CLUAP1Q96AJ1 413 aa19.35■□□□□ 0.69
SSH3-210ENST00000532881 IDI1Q13907 227 aa19.33■□□□□ 0.68
SSH3-210ENST00000532881 POGZQ7Z3K3 1410 aa19.32■□□□□ 0.68
SSH3-210ENST00000532881 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
SSH3-210ENST00000532881 RLBP1P12271 317 aa19.32■□□□□ 0.68
SSH3-210ENST00000532881 QRICH2Q9H0J4 1663 aa19.31■□□□□ 0.68
SSH3-210ENST00000532881 ADGRB1O14514 1584 aa19.31■□□□□ 0.68
SSH3-210ENST00000532881 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
SSH3-210ENST00000532881 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
SSH3-210ENST00000532881 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
SSH3-210ENST00000532881 U2AF1L5P0DN76 240 aaPredicted RBP19.3■□□□□ 0.68
SSH3-210ENST00000532881 U2AF1Q01081 240 aaKnown RBP eCLIP19.3■□□□□ 0.68
SSH3-210ENST00000532881 RUNDC1Q96C34 613 aa19.3■□□□□ 0.68
SSH3-210ENST00000532881 SIGLEC1Q9BZZ2 1709 aa19.29■□□□□ 0.68
SSH3-210ENST00000532881 PPLO60437 1756 aa19.28■□□□□ 0.68
SSH3-210ENST00000532881 SBNO2Q9Y2G9 1366 aa19.28■□□□□ 0.68
SSH3-210ENST00000532881 LMTK2Q8IWU2 1503 aa19.28■□□□□ 0.68
SSH3-210ENST00000532881 FBLN1P23142 703 aa19.28■□□□□ 0.68
SSH3-210ENST00000532881 SHPRHQ149N8 1683 aa19.28■□□□□ 0.68
SSH3-210ENST00000532881 MINK1Q8N4C8 1332 aaPredicted RBP19.28■□□□□ 0.68
SSH3-210ENST00000532881 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
SSH3-210ENST00000532881 SEC24BO95487 1268 aa19.28■□□□□ 0.68
SSH3-210ENST00000532881 SRPK2P78362 688 aaKnown RBP19.28■□□□□ 0.68
SSH3-210ENST00000532881 NEURL4Q96JN8 1562 aa19.28■□□□□ 0.68
SSH3-210ENST00000532881 CGNL1Q0VF96 1302 aa19.27■□□□□ 0.68
SSH3-210ENST00000532881 RARSP54136 660 aaKnown RBP19.27■□□□□ 0.68
SSH3-210ENST00000532881 TSR2Q969E8 191 aaKnown RBP19.27■□□□□ 0.68
SSH3-210ENST00000532881 MYO3AQ8NEV4 1616 aa19.27■□□□□ 0.68
SSH3-210ENST00000532881 FBXO31Q5XUX0 539 aaPredicted RBP19.27■□□□□ 0.67
SSH3-210ENST00000532881 ABCC3O15438 1527 aa19.26■□□□□ 0.67
SSH3-210ENST00000532881 U2SURPO15042 1029 aaKnown RBP19.26■□□□□ 0.67
SSH3-210ENST00000532881 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
SSH3-210ENST00000532881 PCDHB15Q9Y5E8 787 aa19.25■□□□□ 0.67
SSH3-210ENST00000532881 VGFO15240 615 aaPredicted RBP19.24■□□□□ 0.67
SSH3-210ENST00000532881 TULP4Q9NRJ4 1543 aa19.24■□□□□ 0.67
SSH3-210ENST00000532881 SETBP1Q9Y6X0 1596 aa19.24■□□□□ 0.67
SSH3-210ENST00000532881 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
SSH3-210ENST00000532881 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
SSH3-210ENST00000532881 YEATS2Q9ULM3 1422 aa19.23■□□□□ 0.67
SSH3-210ENST00000532881 GLI2P10070 1586 aa19.22■□□□□ 0.67
SSH3-210ENST00000532881 ZC3H13Q5T200 1668 aaKnown RBP19.22■□□□□ 0.67
SSH3-210ENST00000532881 PRAM1Q96QH2 718 aa19.21■□□□□ 0.67
SSH3-210ENST00000532881 PDE3AQ14432 1141 aa19.21■□□□□ 0.67
SSH3-210ENST00000532881 CFAP53Q96M91 514 aa19.21■□□□□ 0.67
SSH3-210ENST00000532881 DDRGK1Q96HY6 314 aa19.2■□□□□ 0.66
SSH3-210ENST00000532881 A0A1W2PP64 1363 aa19.2■□□□□ 0.66
SSH3-210ENST00000532881 RPGRIP1LQ68CZ1 1315 aa19.2■□□□□ 0.66
SSH3-210ENST00000532881 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
SSH3-210ENST00000532881 DAXXQ9UER7 740 aaPredicted RBP19.19■□□□□ 0.66
SSH3-210ENST00000532881 CAMSAP1Q5T5Y3 1602 aa19.18■□□□□ 0.66
SSH3-210ENST00000532881 IQSEC2Q5JU85 1478 aa19.18■□□□□ 0.66
SSH3-210ENST00000532881 NEXMIFQ5QGS0 1516 aa19.18■□□□□ 0.66
SSH3-210ENST00000532881 ANKRD36BQ8N2N9 1353 aa19.18■□□□□ 0.66
SSH3-210ENST00000532881 NFKBIBQ15653 356 aa19.18■□□□□ 0.66
SSH3-210ENST00000532881 PPM1GO15355 546 aaPredicted RBP19.17■□□□□ 0.66
SSH3-210ENST00000532881 POGKQ9P215 609 aa19.17■□□□□ 0.66
SSH3-210ENST00000532881 USP19O94966 1318 aa19.16■□□□□ 0.66
SSH3-210ENST00000532881 ARHGEF28Q8N1W1 1705 aaKnown RBP19.16■□□□□ 0.66
SSH3-210ENST00000532881 FYB1O15117 783 aa19.16■□□□□ 0.66
SSH3-210ENST00000532881 EXOSC9Q06265 439 aaKnown RBP19.15■□□□□ 0.66
SSH3-210ENST00000532881 WDR63Q8IWG1 891 aa19.15■□□□□ 0.66
SSH3-210ENST00000532881 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
SSH3-210ENST00000532881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.15■□□□□ 0.66
SSH3-210ENST00000532881 MYO5BQ9ULV0 1848 aa19.14■□□□□ 0.65
SSH3-210ENST00000532881 WAPLQ7Z5K2 1190 aa19.13■□□□□ 0.65
SSH3-210ENST00000532881 NGEFQ8N5V2 710 aa19.13■□□□□ 0.65
SSH3-210ENST00000532881 CABP1Q9NZU7 370 aa19.13■□□□□ 0.65
SSH3-210ENST00000532881 DIP2CQ9Y2E4 1556 aa19.13■□□□□ 0.65
SSH3-210ENST00000532881 IL27Q8NEV9 243 aa19.13■□□□□ 0.65
SSH3-210ENST00000532881 TRIM35Q9UPQ4 493 aa19.13■□□□□ 0.65
SSH3-210ENST00000532881 PDZRN3Q9UPQ7 1066 aa19.13■□□□□ 0.65
SSH3-210ENST00000532881 MLECQ14165 292 aa19.12■□□□□ 0.65
SSH3-210ENST00000532881 PIK3C2BO00750 1634 aa19.12■□□□□ 0.65
SSH3-210ENST00000532881 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
SSH3-210ENST00000532881 RTN4Q9NQC3 1192 aaKnown RBP19.12■□□□□ 0.65
SSH3-210ENST00000532881 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
SSH3-210ENST00000532881 FRAT2O75474 233 aaPredicted RBP19.11■□□□□ 0.65
SSH3-210ENST00000532881 STAG3Q9UJ98 1225 aa19.11■□□□□ 0.65
SSH3-210ENST00000532881 CDK19Q9BWU1 502 aa19.1■□□□□ 0.65
SSH3-210ENST00000532881 SMC4Q9NTJ3 1288 aa19.1■□□□□ 0.65
SSH3-210ENST00000532881 MYH16Q9H6N6 1097 aa19.09■□□□□ 0.65
SSH3-210ENST00000532881 SSH1Q8WYL5 1049 aa19.09■□□□□ 0.65
SSH3-210ENST00000532881 RIPK4P57078 832 aa19.08■□□□□ 0.65
SSH3-210ENST00000532881 FTSJ3Q8IY81 847 aaKnown RBP19.08■□□□□ 0.65
SSH3-210ENST00000532881 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
SSH3-210ENST00000532881 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
SSH3-210ENST00000532881 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
SSH3-210ENST00000532881 CFAP74Q9C0B2 1584 aa19.07■□□□□ 0.64
SSH3-210ENST00000532881 TRIM27P14373 513 aa19.07■□□□□ 0.64
SSH3-210ENST00000532881 THUMPD2Q9BTF0 503 aaKnown RBP19.07■□□□□ 0.64
SSH3-210ENST00000532881 SLKQ9H2G2 1235 aaPredicted RBP19.07■□□□□ 0.64
SSH3-210ENST00000532881 NCKAP5LQ9HCH0 1330 aa19.06■□□□□ 0.64
SSH3-210ENST00000532881 MVPQ14764 893 aaKnown RBP19.06■□□□□ 0.64
SSH3-210ENST00000532881 MAPK8IP3Q9UPT6 1336 aa19.06■□□□□ 0.64
SSH3-210ENST00000532881 HMOX1P09601 288 aa19.06■□□□□ 0.64
SSH3-210ENST00000532881 DZIP1LQ8IYY4 767 aaKnown RBP19.06■□□□□ 0.64
SSH3-210ENST00000532881 ZRANB1Q9UGI0 708 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms