RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 USP21Q9UK80 565 aa12.79□□□□□ -0.36
NUP98-219ENST00000532475 METP08581 1390 aa12.79□□□□□ -0.36
NUP98-219ENST00000532475 ASXL1Q8IXJ9 1541 aa12.78□□□□□ -0.36
NUP98-219ENST00000532475 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
NUP98-219ENST00000532475 GCC2Q8IWJ2 1684 aa12.77□□□□□ -0.37
NUP98-219ENST00000532475 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
NUP98-219ENST00000532475 TRPC5Q9UL62 973 aaPredicted RBP12.76□□□□□ -0.37
NUP98-219ENST00000532475 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
NUP98-219ENST00000532475 DCCP43146 1447 aa12.75□□□□□ -0.37
NUP98-219ENST00000532475 ATAD2Q6PL18 1390 aa12.75□□□□□ -0.37
NUP98-219ENST00000532475 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
NUP98-219ENST00000532475 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
NUP98-219ENST00000532475 SETBP1Q9Y6X0 1596 aa12.73□□□□□ -0.37
NUP98-219ENST00000532475 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
NUP98-219ENST00000532475 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
NUP98-219ENST00000532475 GTF3C3Q9Y5Q9 886 aa12.73□□□□□ -0.37
NUP98-219ENST00000532475 TRPM2O94759 1503 aa12.72□□□□□ -0.37
NUP98-219ENST00000532475 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
NUP98-219ENST00000532475 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
NUP98-219ENST00000532475 C1orf167Q5SNV9 1468 aa12.71□□□□□ -0.38
NUP98-219ENST00000532475 NUP155O75694 1391 aa12.7□□□□□ -0.38
NUP98-219ENST00000532475 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
NUP98-219ENST00000532475 ADGRL3Q9HAR2 1447 aa12.7□□□□□ -0.38
NUP98-219ENST00000532475 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
NUP98-219ENST00000532475 UNC13BO14795 1591 aa12.69□□□□□ -0.38
NUP98-219ENST00000532475 E9PCH4 1651 aa12.68□□□□□ -0.38
NUP98-219ENST00000532475 DEFB132Q7Z7B7 95 aa12.68□□□□□ -0.38
NUP98-219ENST00000532475 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
NUP98-219ENST00000532475 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
NUP98-219ENST00000532475 ATRNO75882 1429 aa12.68□□□□□ -0.38
NUP98-219ENST00000532475 BCL9LQ86UU0 1499 aa12.67□□□□□ -0.38
NUP98-219ENST00000532475 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
NUP98-219ENST00000532475 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
NUP98-219ENST00000532475 XRN1Q8IZH2 1706 aaKnown RBP12.67□□□□□ -0.38
NUP98-219ENST00000532475 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
NUP98-219ENST00000532475 ITGAEP38570 1179 aa12.66□□□□□ -0.38
NUP98-219ENST00000532475 NBR1Q14596 966 aa12.66□□□□□ -0.38
NUP98-219ENST00000532475 HOMEZQ8IX15 550 aa12.66□□□□□ -0.38
NUP98-219ENST00000532475 ROBO2Q9HCK4 1378 aa12.66□□□□□ -0.38
NUP98-219ENST00000532475 FOXO3O43524 673 aa12.65□□□□□ -0.38
NUP98-219ENST00000532475 PTCH1Q13635 1447 aa12.64□□□□□ -0.39
NUP98-219ENST00000532475 ESCO1Q5FWF5 840 aa12.64□□□□□ -0.39
NUP98-219ENST00000532475 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
NUP98-219ENST00000532475 NUTM2FA1L443 756 aa12.62□□□□□ -0.39
NUP98-219ENST00000532475 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
NUP98-219ENST00000532475 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
NUP98-219ENST00000532475 UNC5CLQ8IV45 518 aa12.6□□□□□ -0.39
NUP98-219ENST00000532475 MYOM2P54296 1465 aa12.59□□□□□ -0.39
NUP98-219ENST00000532475 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
NUP98-219ENST00000532475 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
NUP98-219ENST00000532475 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
NUP98-219ENST00000532475 NPHP3Q7Z494 1330 aa12.59□□□□□ -0.39
NUP98-219ENST00000532475 IQGAP3Q86VI3 1631 aa12.59□□□□□ -0.39
NUP98-219ENST00000532475 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
NUP98-219ENST00000532475 LAMC1P11047 1609 aa12.58□□□□□ -0.4
NUP98-219ENST00000532475 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
NUP98-219ENST00000532475 WAPLQ7Z5K2 1190 aa12.57□□□□□ -0.4
NUP98-219ENST00000532475 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
NUP98-219ENST00000532475 RALGAPBQ86X10 1494 aa12.56□□□□□ -0.4
NUP98-219ENST00000532475 NEXMIFQ5QGS0 1516 aa12.56□□□□□ -0.4
NUP98-219ENST00000532475 PXDNQ92626 1479 aa12.55□□□□□ -0.4
NUP98-219ENST00000532475 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
NUP98-219ENST00000532475 HRCP23327 699 aa12.55□□□□□ -0.4
NUP98-219ENST00000532475 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
NUP98-219ENST00000532475 PPARGC1BQ86YN6 1023 aaKnown RBP12.55□□□□□ -0.4
NUP98-219ENST00000532475 STK26Q9P289 416 aa12.55□□□□□ -0.4
NUP98-219ENST00000532475 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
NUP98-219ENST00000532475 SPATA31A3Q5VYP0 1347 aa12.54□□□□□ -0.4
NUP98-219ENST00000532475 COL22A1Q8NFW1 1626 aaPredicted RBP12.54□□□□□ -0.4
NUP98-219ENST00000532475 SLIT2O94813 1529 aa12.53□□□□□ -0.4
NUP98-219ENST00000532475 GLI3P10071 1580 aa12.53□□□□□ -0.4
NUP98-219ENST00000532475 KRT28Q7Z3Y7 464 aa12.53□□□□□ -0.4
NUP98-219ENST00000532475 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
NUP98-219ENST00000532475 PROM2Q8N271 834 aa12.53□□□□□ -0.4
NUP98-219ENST00000532475 HFM1A2PYH4 1435 aa12.53□□□□□ -0.4
NUP98-219ENST00000532475 VPS72Q15906 364 aa12.52□□□□□ -0.41
NUP98-219ENST00000532475 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.41
NUP98-219ENST00000532475 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
NUP98-219ENST00000532475 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
NUP98-219ENST00000532475 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
NUP98-219ENST00000532475 FAM182BQ5T319 152 aa12.51□□□□□ -0.41
NUP98-219ENST00000532475 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
NUP98-219ENST00000532475 FAM83GA6ND36 823 aa12.5□□□□□ -0.41
NUP98-219ENST00000532475 TSHZ2Q9NRE2 1034 aa12.5□□□□□ -0.41
NUP98-219ENST00000532475 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
NUP98-219ENST00000532475 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
NUP98-219ENST00000532475 SPHKAPQ2M3C7 1700 aa12.5□□□□□ -0.41
NUP98-219ENST00000532475 LRPPRCP42704 1394 aaKnown RBP12.49□□□□□ -0.41
NUP98-219ENST00000532475 PLEKHH1Q9ULM0 1364 aa12.49□□□□□ -0.41
NUP98-219ENST00000532475 NAIPQ13075 1403 aa12.48□□□□□ -0.41
NUP98-219ENST00000532475 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
NUP98-219ENST00000532475 BAG6P46379 1132 aa12.48□□□□□ -0.41
NUP98-219ENST00000532475 R3HDM1Q15032 1099 aaKnown RBP12.48□□□□□ -0.41
NUP98-219ENST00000532475 BRWD3Q6RI45 1802 aa12.48□□□□□ -0.41
NUP98-219ENST00000532475 A0A0G2JS52 829 aa12.47□□□□□ -0.41
NUP98-219ENST00000532475 MYT1Q01538 1121 aa12.47□□□□□ -0.41
NUP98-219ENST00000532475 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
NUP98-219ENST00000532475 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
NUP98-219ENST00000532475 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
NUP98-219ENST00000532475 RGL3Q3MIN7 710 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 917.2 ms