RNA–Protein interactions for RNA: ENST00000532445.1

NCAPD3-209, Transcript of non-SMC condensin II complex subunit D3, human

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-209	ENST00000532445	LRRC59	Q96AG4	307 aa	Known RBP	34.01	■■■■□ 3.03
NCAPD3-209	ENST00000532445	C14orf93	Q9H972	538 aa	Known RBP	34	■■■■□ 3.03
NCAPD3-209	ENST00000532445	DHX57	Q6P158	1386 aa	Known RBP	33.99	■■■■□ 3.03
NCAPD3-209	ENST00000532445	DDX17	Q92841	729 aa	Known RBP	33.98	■■■■□ 3.03
NCAPD3-209	ENST00000532445	WAPL	Q7Z5K2	1190 aa		33.97	■■■■□ 3.03
NCAPD3-209	ENST00000532445	CFAP70	Q5T0N1	1121 aa		33.96	■■■■□ 3.03
NCAPD3-209	ENST00000532445	ORAI2	Q96SN7	254 aa		33.96	■■■■□ 3.03
NCAPD3-209	ENST00000532445	KIF1A	Q12756	1690 aa		33.95	■■■■□ 3.03
NCAPD3-209	ENST00000532445	PLEKHH1	Q9ULM0	1364 aa		33.95	■■■■□ 3.02
NCAPD3-209	ENST00000532445	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.94	■■■■□ 3.02
NCAPD3-209	ENST00000532445	NUTM2E	B1AL46	878 aa	Predicted RBP	33.94	■■■■□ 3.02
NCAPD3-209	ENST00000532445	POTEA	Q6S8J7	498 aa		33.94	■■■■□ 3.02
NCAPD3-209	ENST00000532445	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.94	■■■■□ 3.02
NCAPD3-209	ENST00000532445	PNPLA6	Q8IY17	1366 aa		33.93	■■■■□ 3.02
NCAPD3-209	ENST00000532445	RGPD8	O14715	1765 aa	Predicted RBP	33.93	■■■■□ 3.02
NCAPD3-209	ENST00000532445	DLC1	Q96QB1	1528 aa		33.92	■■■■□ 3.02
NCAPD3-209	ENST00000532445	ESCO1	Q5FWF5	840 aa		33.89	■■■■□ 3.02
NCAPD3-209	ENST00000532445	DCAF11	Q8TEB1	546 aa		33.89	■■■■□ 3.02
NCAPD3-209	ENST00000532445	SIRT1	Q96EB6	747 aa		33.89	■■■■□ 3.02
NCAPD3-209	ENST00000532445	ADGRB1	O14514	1584 aa		33.89	■■■■□ 3.02
NCAPD3-209	ENST00000532445	STAC3	Q96MF2	364 aa		33.88	■■■■□ 3.01
NCAPD3-209	ENST00000532445	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.88	■■■■□ 3.01
NCAPD3-209	ENST00000532445	SOS2	Q07890	1332 aa	Predicted RBP	33.87	■■■■□ 3.01
NCAPD3-209	ENST00000532445	ZNF772	Q68DY9	489 aa	Predicted RBP	33.87	■■■■□ 3.01
NCAPD3-209	ENST00000532445	KDM2A	Q9Y2K7	1162 aa		33.87	■■■■□ 3.01
NCAPD3-209	ENST00000532445	NPHP3	Q7Z494	1330 aa		33.86	■■■■□ 3.01
NCAPD3-209	ENST00000532445	NUTM2F	A1L443	756 aa		33.83	■■■■□ 3.01
NCAPD3-209	ENST00000532445	ADGRB2	O60241	1585 aa		33.83	■■■■□ 3.01
NCAPD3-209	ENST00000532445	PXDN	Q92626	1479 aa		33.82	■■■■□ 3.01
NCAPD3-209	ENST00000532445	MARF1	Q9Y4F3	1742 aa	Known RBP	33.81	■■■■□ 3
NCAPD3-209	ENST00000532445	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.8	■■■■□ 3
NCAPD3-209	ENST00000532445	PRAM1	Q96QH2	718 aa		33.8	■■■■□ 3
NCAPD3-209	ENST00000532445	KIAA1210	Q9ULL0	1709 aa		33.79	■■■■□ 3
NCAPD3-209	ENST00000532445	POGK	Q9P215	609 aa		33.79	■■■■□ 3
NCAPD3-209	ENST00000532445	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.77	■■■■□ 3
NCAPD3-209	ENST00000532445	FOXO3	O43524	673 aa		33.75	■■■□□ 2.99
NCAPD3-209	ENST00000532445	AFF2	P51816	1311 aa		33.75	■■■□□ 2.99
NCAPD3-209	ENST00000532445	C8orf37	Q96NL8	207 aa		33.74	■■■□□ 2.99
NCAPD3-209	ENST00000532445	TRAK1	Q9UPV9	953 aa		33.73	■■■□□ 2.99
NCAPD3-209	ENST00000532445	USP32	Q8NFA0	1604 aa		33.72	■■■□□ 2.99
NCAPD3-209	ENST00000532445	XPC	Q01831	940 aa	Predicted RBP	33.7	■■■□□ 2.99
NCAPD3-209	ENST00000532445	ANKAR	Q7Z5J8	1434 aa		33.69	■■■□□ 2.98
NCAPD3-209	ENST00000532445	ADAMTS2	O95450	1211 aa		33.68	■■■□□ 2.98
NCAPD3-209	ENST00000532445	ITSN1	Q15811	1721 aa		33.67	■■■□□ 2.98
NCAPD3-209	ENST00000532445	EIF3A	Q14152	1382 aa	Known RBP	33.67	■■■□□ 2.98
NCAPD3-209	ENST00000532445	PHF8	Q9UPP1	1060 aa		33.65	■■■□□ 2.98
NCAPD3-209	ENST00000532445	RXRB	P28702	533 aa		33.64	■■■□□ 2.98
NCAPD3-209	ENST00000532445	NGLY1	Q96IV0	654 aa		33.64	■■■□□ 2.98
NCAPD3-209	ENST00000532445	TULP4	Q9NRJ4	1543 aa		33.63	■■■□□ 2.97
NCAPD3-209	ENST00000532445	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.63	■■■□□ 2.97
NCAPD3-209	ENST00000532445	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.62	■■■□□ 2.97
NCAPD3-209	ENST00000532445	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.6	■■■□□ 2.97
NCAPD3-209	ENST00000532445	ABCA3	Q99758	1704 aa		33.59	■■■□□ 2.97
NCAPD3-209	ENST00000532445	KRT28	Q7Z3Y7	464 aa		33.59	■■■□□ 2.97
NCAPD3-209	ENST00000532445	SPATA31A3	Q5VYP0	1347 aa		33.58	■■■□□ 2.97
NCAPD3-209	ENST00000532445	PSME1	Q06323	249 aa		33.58	■■■□□ 2.97
NCAPD3-209	ENST00000532445	TNS3	Q68CZ2	1445 aa		33.58	■■■□□ 2.97
NCAPD3-209	ENST00000532445	QTRT2	Q9H974	415 aa	Known RBP	33.55	■■■□□ 2.96
NCAPD3-209	ENST00000532445	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.55	■■■□□ 2.96
NCAPD3-209	ENST00000532445	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.55	■■■□□ 2.96
NCAPD3-209	ENST00000532445	USP21	Q9UK80	565 aa		33.53	■■■□□ 2.96
NCAPD3-209	ENST00000532445	SBNO1	A3KN83	1393 aa		33.52	■■■□□ 2.96
NCAPD3-209	ENST00000532445	WASL	O00401	505 aa	Predicted RBP	33.52	■■■□□ 2.96
NCAPD3-209	ENST00000532445	RBM6	P78332	1123 aa	Known RBP	33.51	■■■□□ 2.95
NCAPD3-209	ENST00000532445	PMFBP1	Q8TBY8	1022 aa		33.5	■■■□□ 2.95
NCAPD3-209	ENST00000532445	TOPAZ1	Q8N9V7	1692 aa		33.48	■■■□□ 2.95
NCAPD3-209	ENST00000532445	ALS2	Q96Q42	1657 aa		33.48	■■■□□ 2.95
NCAPD3-209	ENST00000532445	QRICH2	Q9H0J4	1663 aa		33.48	■■■□□ 2.95
NCAPD3-209	ENST00000532445	ARHGEF10	O15013	1369 aa		33.48	■■■□□ 2.95
NCAPD3-209	ENST00000532445	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.48	■■■□□ 2.95
NCAPD3-209	ENST00000532445	TRPM1	Q7Z4N2	1603 aa		33.48	■■■□□ 2.95
NCAPD3-209	ENST00000532445	RGS12	O14924	1447 aa		33.47	■■■□□ 2.95
NCAPD3-209	ENST00000532445	HAP1	P54257	671 aa	Predicted RBP	33.47	■■■□□ 2.95
NCAPD3-209	ENST00000532445	TRPC5	Q9UL62	973 aa	Predicted RBP	33.47	■■■□□ 2.95
NCAPD3-209	ENST00000532445	GPRASP1	Q5JY77	1395 aa		33.47	■■■□□ 2.95
NCAPD3-209	ENST00000532445	PLCH1	Q4KWH8	1693 aa		33.46	■■■□□ 2.95
NCAPD3-209	ENST00000532445	ATP7B	P35670	1465 aa		33.46	■■■□□ 2.95
NCAPD3-209	ENST00000532445	PRR36	Q9H6K5	1346 aa		33.46	■■■□□ 2.95
NCAPD3-209	ENST00000532445	LMOD2	Q6P5Q4	547 aa		33.45	■■■□□ 2.95
NCAPD3-209	ENST00000532445	NWD2	Q9ULI1	1742 aa		33.43	■■■□□ 2.94
NCAPD3-209	ENST00000532445	ATRN	O75882	1429 aa		33.43	■■■□□ 2.94
NCAPD3-209	ENST00000532445	NBPF1	Q3BBV0	1214 aa		33.41	■■■□□ 2.94
NCAPD3-209	ENST00000532445	L3MBTL2	Q969R5	705 aa		33.4	■■■□□ 2.94
NCAPD3-209	ENST00000532445	BCL9L	Q86UU0	1499 aa		33.39	■■■□□ 2.94
NCAPD3-209	ENST00000532445	NGDN	Q8NEJ9	315 aa	Known RBP	33.39	■■■□□ 2.94
NCAPD3-209	ENST00000532445	SIN3A	Q96ST3	1273 aa		33.39	■■■□□ 2.94
NCAPD3-209	ENST00000532445	NEUROD1	Q13562	356 aa		33.38	■■■□□ 2.93
NCAPD3-209	ENST00000532445	CRYBG1	Q9Y4K1	1723 aa		33.38	■■■□□ 2.93
NCAPD3-209	ENST00000532445	SLIT2	O94813	1529 aa		33.37	■■■□□ 2.93
NCAPD3-209	ENST00000532445	PLEKHG5	O94827	1062 aa		33.36	■■■□□ 2.93
NCAPD3-209	ENST00000532445	NUDT16	Q96DE0	195 aa	Known RBP	33.36	■■■□□ 2.93
NCAPD3-209	ENST00000532445	CABLES1	Q8TDN4	633 aa		33.34	■■■□□ 2.93
NCAPD3-209	ENST00000532445	CDK19	Q9BWU1	502 aa		33.34	■■■□□ 2.93
NCAPD3-209	ENST00000532445	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.33	■■■□□ 2.93
NCAPD3-209	ENST00000532445	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.31	■■■□□ 2.92
NCAPD3-209	ENST00000532445	COL14A1	Q05707	1796 aa	Known RBP	33.3	■■■□□ 2.92
NCAPD3-209	ENST00000532445	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.29	■■■□□ 2.92
NCAPD3-209	ENST00000532445	PAK3	O75914	559 aa	Predicted RBP	33.29	■■■□□ 2.92
NCAPD3-209	ENST00000532445	UNC5CL	Q8IV45	518 aa		33.29	■■■□□ 2.92
NCAPD3-209	ENST00000532445	GLI3	P10071	1580 aa		33.27	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms