RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 NUTM2AQ8IVF1 878 aaPredicted RBP24.34■■□□□ 1.49
CAVIN3-204ENST00000532354 C14orf93Q9H972 538 aaKnown RBP24.34■■□□□ 1.49
CAVIN3-204ENST00000532354 NRXN1Q9ULB1 1477 aa24.32■■□□□ 1.48
CAVIN3-204ENST00000532354 YTHDC2Q9H6S0 1430 aaKnown RBP24.31■■□□□ 1.48
CAVIN3-204ENST00000532354 PNPLA6Q8IY17 1366 aa24.3■■□□□ 1.48
CAVIN3-204ENST00000532354 CFAP70Q5T0N1 1121 aa24.3■■□□□ 1.48
CAVIN3-204ENST00000532354 ZNF772Q68DY9 489 aaPredicted RBP24.3■■□□□ 1.48
CAVIN3-204ENST00000532354 LAMC1P11047 1609 aa24.3■■□□□ 1.48
CAVIN3-204ENST00000532354 SOS2Q07890 1332 aaPredicted RBP24.3■■□□□ 1.48
CAVIN3-204ENST00000532354 PLEKHH1Q9ULM0 1364 aa24.29■■□□□ 1.48
CAVIN3-204ENST00000532354 CDC42BPGQ6DT37 1551 aa24.29■■□□□ 1.48
CAVIN3-204ENST00000532354 MYOM2P54296 1465 aa24.29■■□□□ 1.48
CAVIN3-204ENST00000532354 ESCO1Q5FWF5 840 aa24.28■■□□□ 1.48
CAVIN3-204ENST00000532354 SIRT1Q96EB6 747 aa24.28■■□□□ 1.48
CAVIN3-204ENST00000532354 KNDC1Q76NI1 1749 aa24.27■■□□□ 1.48
CAVIN3-204ENST00000532354 DHX57Q6P158 1386 aaKnown RBP24.25■■□□□ 1.47
CAVIN3-204ENST00000532354 NUTM2FA1L443 756 aa24.24■■□□□ 1.47
CAVIN3-204ENST00000532354 AFF2P51816 1311 aa24.22■■□□□ 1.47
CAVIN3-204ENST00000532354 NPHP3Q7Z494 1330 aa24.21■■□□□ 1.47
CAVIN3-204ENST00000532354 FOXO3O43524 673 aa24.2■■□□□ 1.46
CAVIN3-204ENST00000532354 DCAF11Q8TEB1 546 aa24.2■■□□□ 1.46
CAVIN3-204ENST00000532354 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.46
CAVIN3-204ENST00000532354 C8orf37Q96NL8 207 aa24.19■■□□□ 1.46
CAVIN3-204ENST00000532354 ADAMTS2O95450 1211 aa24.17■■□□□ 1.46
CAVIN3-204ENST00000532354 RXRBP28702 533 aa24.17■■□□□ 1.46
CAVIN3-204ENST00000532354 PRAM1Q96QH2 718 aa24.17■■□□□ 1.46
CAVIN3-204ENST00000532354 PXDNQ92626 1479 aa24.17■■□□□ 1.46
CAVIN3-204ENST00000532354 XPCQ01831 940 aaPredicted RBP24.16■■□□□ 1.46
CAVIN3-204ENST00000532354 STAC3Q96MF2 364 aa24.16■■□□□ 1.46
CAVIN3-204ENST00000532354 FMN2Q9NZ56 1722 aa24.15■■□□□ 1.46
CAVIN3-204ENST00000532354 SAFB2Q14151 953 aaKnown RBP eCLIP24.14■■□□□ 1.45
CAVIN3-204ENST00000532354 NGLY1Q96IV0 654 aa24.14■■□□□ 1.45
CAVIN3-204ENST00000532354 ADGRB1O14514 1584 aa24.13■■□□□ 1.45
CAVIN3-204ENST00000532354 QTRT2Q9H974 415 aaKnown RBP24.13■■□□□ 1.45
CAVIN3-204ENST00000532354 DLC1Q96QB1 1528 aa24.13■■□□□ 1.45
CAVIN3-204ENST00000532354 POGKQ9P215 609 aa24.12■■□□□ 1.45
CAVIN3-204ENST00000532354 COL22A1Q8NFW1 1626 aaPredicted RBP24.11■■□□□ 1.45
CAVIN3-204ENST00000532354 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
CAVIN3-204ENST00000532354 KRT28Q7Z3Y7 464 aa24.08■■□□□ 1.45
CAVIN3-204ENST00000532354 PHF8Q9UPP1 1060 aa24.08■■□□□ 1.45
CAVIN3-204ENST00000532354 CDK12Q9NYV4 1490 aaPredicted RBP24.07■■□□□ 1.44
CAVIN3-204ENST00000532354 RBM6P78332 1123 aaKnown RBP24.07■■□□□ 1.44
CAVIN3-204ENST00000532354 FNBP4Q8N3X1 1017 aaPredicted RBP24.07■■□□□ 1.44
CAVIN3-204ENST00000532354 SPATA31A3Q5VYP0 1347 aa24.07■■□□□ 1.44
CAVIN3-204ENST00000532354 KIF1AQ12756 1690 aa24.06■■□□□ 1.44
CAVIN3-204ENST00000532354 RGPD8O14715 1765 aaPredicted RBP24.05■■□□□ 1.44
CAVIN3-204ENST00000532354 USP21Q9UK80 565 aa24.04■■□□□ 1.44
CAVIN3-204ENST00000532354 HIRIP3Q9BW71 556 aaPredicted RBP24.03■■□□□ 1.44
CAVIN3-204ENST00000532354 PSME1Q06323 249 aa24.02■■□□□ 1.44
CAVIN3-204ENST00000532354 MINK1Q8N4C8 1332 aaPredicted RBP24.02■■□□□ 1.44
CAVIN3-204ENST00000532354 ANKARQ7Z5J8 1434 aa24.01■■□□□ 1.43
CAVIN3-204ENST00000532354 ADGRB2O60241 1585 aa24.01■■□□□ 1.43
CAVIN3-204ENST00000532354 UPF1Q92900 1129 aaKnown RBP eCLIP24.01■■□□□ 1.43
CAVIN3-204ENST00000532354 TRPC5Q9UL62 973 aaPredicted RBP24■■□□□ 1.43
CAVIN3-204ENST00000532354 USP32Q8NFA0 1604 aa23.99■■□□□ 1.43
CAVIN3-204ENST00000532354 PMFBP1Q8TBY8 1022 aa23.99■■□□□ 1.43
CAVIN3-204ENST00000532354 RGS12O14924 1447 aa23.99■■□□□ 1.43
CAVIN3-204ENST00000532354 WASLO00401 505 aaPredicted RBP23.98■■□□□ 1.43
CAVIN3-204ENST00000532354 BCL9LQ86UU0 1499 aa23.96■■□□□ 1.43
CAVIN3-204ENST00000532354 ATRNO75882 1429 aa23.96■■□□□ 1.43
CAVIN3-204ENST00000532354 TNS3Q68CZ2 1445 aa23.96■■□□□ 1.43
CAVIN3-204ENST00000532354 SBNO1A3KN83 1393 aa23.96■■□□□ 1.43
CAVIN3-204ENST00000532354 PRR36Q9H6K5 1346 aa23.96■■□□□ 1.43
CAVIN3-204ENST00000532354 MARF1Q9Y4F3 1742 aaKnown RBP23.95■■□□□ 1.42
CAVIN3-204ENST00000532354 EIF3AQ14152 1382 aaKnown RBP23.94■■□□□ 1.42
CAVIN3-204ENST00000532354 CABLES1Q8TDN4 633 aa23.93■■□□□ 1.42
CAVIN3-204ENST00000532354 TULP4Q9NRJ4 1543 aa23.92■■□□□ 1.42
CAVIN3-204ENST00000532354 ARHGEF28Q8N1W1 1705 aaKnown RBP23.92■■□□□ 1.42
CAVIN3-204ENST00000532354 NBPF1Q3BBV0 1214 aa23.91■■□□□ 1.42
CAVIN3-204ENST00000532354 LMOD2Q6P5Q4 547 aa23.91■■□□□ 1.42
CAVIN3-204ENST00000532354 ARHGEF10O15013 1369 aa23.91■■□□□ 1.42
CAVIN3-204ENST00000532354 HAP1P54257 671 aaPredicted RBP23.89■■□□□ 1.41
CAVIN3-204ENST00000532354 UNC5CLQ8IV45 518 aa23.89■■□□□ 1.41
CAVIN3-204ENST00000532354 KIAA1210Q9ULL0 1709 aa23.89■■□□□ 1.41
CAVIN3-204ENST00000532354 SLIT2O94813 1529 aa23.89■■□□□ 1.41
CAVIN3-204ENST00000532354 PLEKHG5O94827 1062 aa23.88■■□□□ 1.41
CAVIN3-204ENST00000532354 GJD4Q96KN9 370 aaPredicted RBP23.88■■□□□ 1.41
CAVIN3-204ENST00000532354 NUDT16Q96DE0 195 aaKnown RBP23.87■■□□□ 1.41
CAVIN3-204ENST00000532354 GPRASP1Q5JY77 1395 aa23.87■■□□□ 1.41
CAVIN3-204ENST00000532354 NGDNQ8NEJ9 315 aaKnown RBP23.86■■□□□ 1.41
CAVIN3-204ENST00000532354 L3MBTL2Q969R5 705 aa23.86■■□□□ 1.41
CAVIN3-204ENST00000532354 CDK19Q9BWU1 502 aa23.86■■□□□ 1.41
CAVIN3-204ENST00000532354 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
CAVIN3-204ENST00000532354 TRPM3Q9HCF6 1732 aaPredicted RBP23.84■■□□□ 1.41
CAVIN3-204ENST00000532354 ATP7BP35670 1465 aa23.83■■□□□ 1.41
CAVIN3-204ENST00000532354 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.83■■□□□ 1.41
CAVIN3-204ENST00000532354 FAM83GA6ND36 823 aa23.81■■□□□ 1.4
CAVIN3-204ENST00000532354 ATAD2Q6PL18 1390 aa23.8■■□□□ 1.4
CAVIN3-204ENST00000532354 ALS2Q96Q42 1657 aa23.8■■□□□ 1.4
CAVIN3-204ENST00000532354 ABCA3Q99758 1704 aa23.8■■□□□ 1.4
CAVIN3-204ENST00000532354 RALGAPBQ86X10 1494 aa23.8■■□□□ 1.4
CAVIN3-204ENST00000532354 PAK3O75914 559 aaPredicted RBP23.79■■□□□ 1.4
CAVIN3-204ENST00000532354 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
CAVIN3-204ENST00000532354 VPS72Q15906 364 aa23.78■■□□□ 1.4
CAVIN3-204ENST00000532354 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
CAVIN3-204ENST00000532354 CENPJQ9HC77 1338 aaPredicted RBP23.77■■□□□ 1.4
CAVIN3-204ENST00000532354 GLI3P10071 1580 aa23.77■■□□□ 1.4
CAVIN3-204ENST00000532354 ITSN1Q15811 1721 aa23.76■■□□□ 1.39
CAVIN3-204ENST00000532354 PLEKHG3A1L390 1219 aa23.76■■□□□ 1.39
CAVIN3-204ENST00000532354 ACEP12821 1306 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms