RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 DLC1Q96QB1 1528 aa13.21□□□□□ -0.29
NECTIN1-207ENST00000532197 MST1RQ04912 1400 aa13.21□□□□□ -0.3
NECTIN1-207ENST00000532197 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
NECTIN1-207ENST00000532197 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
NECTIN1-207ENST00000532197 CFAP70Q5T0N1 1121 aa13.19□□□□□ -0.3
NECTIN1-207ENST00000532197 ZNF772Q68DY9 489 aaPredicted RBP13.19□□□□□ -0.3
NECTIN1-207ENST00000532197 TMEM132EQ6IEE7 984 aa13.19□□□□□ -0.3
NECTIN1-207ENST00000532197 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
NECTIN1-207ENST00000532197 LRP6O75581 1613 aa13.17□□□□□ -0.3
NECTIN1-207ENST00000532197 FMN2Q9NZ56 1722 aa13.17□□□□□ -0.3
NECTIN1-207ENST00000532197 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
NECTIN1-207ENST00000532197 STK26Q9P289 416 aa13.17□□□□□ -0.3
NECTIN1-207ENST00000532197 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
NECTIN1-207ENST00000532197 C1orf167Q5SNV9 1468 aa13.16□□□□□ -0.3
NECTIN1-207ENST00000532197 MEX3CQ5U5Q3 659 aaKnown RBP13.15□□□□□ -0.3
NECTIN1-207ENST00000532197 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
NECTIN1-207ENST00000532197 WAPLQ7Z5K2 1190 aa13.14□□□□□ -0.31
NECTIN1-207ENST00000532197 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-207ENST00000532197 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
NECTIN1-207ENST00000532197 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
NECTIN1-207ENST00000532197 PLEKHH1Q9ULM0 1364 aa13.12□□□□□ -0.31
NECTIN1-207ENST00000532197 TRPM1Q7Z4N2 1603 aa13.12□□□□□ -0.31
NECTIN1-207ENST00000532197 L3MBTL2Q969R5 705 aa13.11□□□□□ -0.31
NECTIN1-207ENST00000532197 PNPLA6Q8IY17 1366 aa13.1□□□□□ -0.31
NECTIN1-207ENST00000532197 PRAM1Q96QH2 718 aa13.1□□□□□ -0.31
NECTIN1-207ENST00000532197 SIN3AQ96ST3 1273 aa13.1□□□□□ -0.31
NECTIN1-207ENST00000532197 POGKQ9P215 609 aa13.1□□□□□ -0.31
NECTIN1-207ENST00000532197 SOS2Q07890 1332 aaPredicted RBP13.1□□□□□ -0.31
NECTIN1-207ENST00000532197 RXRBP28702 533 aa13.09□□□□□ -0.31
NECTIN1-207ENST00000532197 EIF3AQ14152 1382 aaKnown RBP13.08□□□□□ -0.31
NECTIN1-207ENST00000532197 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.32
NECTIN1-207ENST00000532197 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
NECTIN1-207ENST00000532197 ITSN1Q15811 1721 aa13.08□□□□□ -0.32
NECTIN1-207ENST00000532197 NUTM2BA6NNL0 878 aaPredicted RBP13.07□□□□□ -0.32
NECTIN1-207ENST00000532197 NUTM2EB1AL46 878 aaPredicted RBP13.07□□□□□ -0.32
NECTIN1-207ENST00000532197 NEUROD1Q13562 356 aa13.07□□□□□ -0.32
NECTIN1-207ENST00000532197 NUTM2AQ8IVF1 878 aaPredicted RBP13.07□□□□□ -0.32
NECTIN1-207ENST00000532197 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
NECTIN1-207ENST00000532197 AFF2P51816 1311 aa13.07□□□□□ -0.32
NECTIN1-207ENST00000532197 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
NECTIN1-207ENST00000532197 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
NECTIN1-207ENST00000532197 ESCO1Q5FWF5 840 aa13.06□□□□□ -0.32
NECTIN1-207ENST00000532197 PXDNQ92626 1479 aa13.05□□□□□ -0.32
NECTIN1-207ENST00000532197 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
NECTIN1-207ENST00000532197 CLSPNQ9HAW4 1339 aa13.05□□□□□ -0.32
NECTIN1-207ENST00000532197 COL22A1Q8NFW1 1626 aaPredicted RBP13.05□□□□□ -0.32
NECTIN1-207ENST00000532197 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
NECTIN1-207ENST00000532197 QRICH2Q9H0J4 1663 aa13.04□□□□□ -0.32
NECTIN1-207ENST00000532197 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
NECTIN1-207ENST00000532197 RBM6P78332 1123 aaKnown RBP13.03□□□□□ -0.32
NECTIN1-207ENST00000532197 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
NECTIN1-207ENST00000532197 DDX17Q92841 729 aaKnown RBP13.03□□□□□ -0.32
NECTIN1-207ENST00000532197 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
NECTIN1-207ENST00000532197 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
NECTIN1-207ENST00000532197 C8orf37Q96NL8 207 aa13.02□□□□□ -0.33
NECTIN1-207ENST00000532197 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
NECTIN1-207ENST00000532197 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.33
NECTIN1-207ENST00000532197 FOXO3O43524 673 aa13.01□□□□□ -0.33
NECTIN1-207ENST00000532197 FNBP4Q8N3X1 1017 aaPredicted RBP13.01□□□□□ -0.33
NECTIN1-207ENST00000532197 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
NECTIN1-207ENST00000532197 QTRT2Q9H974 415 aaKnown RBP13.01□□□□□ -0.33
NECTIN1-207ENST00000532197 TOPAZ1Q8N9V7 1692 aa13.01□□□□□ -0.33
NECTIN1-207ENST00000532197 MARF1Q9Y4F3 1742 aaKnown RBP13.01□□□□□ -0.33
NECTIN1-207ENST00000532197 ROCK2O75116 1388 aaKnown RBP13□□□□□ -0.33
NECTIN1-207ENST00000532197 CENPJQ9HC77 1338 aaPredicted RBP13□□□□□ -0.33
NECTIN1-207ENST00000532197 NUTM2FA1L443 756 aa13□□□□□ -0.33
NECTIN1-207ENST00000532197 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
NECTIN1-207ENST00000532197 ATP7BP35670 1465 aa12.99□□□□□ -0.33
NECTIN1-207ENST00000532197 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
NECTIN1-207ENST00000532197 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
NECTIN1-207ENST00000532197 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
NECTIN1-207ENST00000532197 RGS12O14924 1447 aa12.98□□□□□ -0.33
NECTIN1-207ENST00000532197 PSME1Q06323 249 aa12.98□□□□□ -0.33
NECTIN1-207ENST00000532197 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
NECTIN1-207ENST00000532197 TIMELESSQ9UNS1 1208 aa12.98□□□□□ -0.33
NECTIN1-207ENST00000532197 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
NECTIN1-207ENST00000532197 SBNO1A3KN83 1393 aa12.97□□□□□ -0.33
NECTIN1-207ENST00000532197 ADAMTS2O95450 1211 aa12.97□□□□□ -0.33
NECTIN1-207ENST00000532197 NBPF8Q3BBV2 869 aa12.97□□□□□ -0.33
NECTIN1-207ENST00000532197 USP21Q9UK80 565 aa12.97□□□□□ -0.33
NECTIN1-207ENST00000532197 ALS2Q96Q42 1657 aa12.96□□□□□ -0.33
NECTIN1-207ENST00000532197 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.33
NECTIN1-207ENST00000532197 PRR36Q9H6K5 1346 aa12.96□□□□□ -0.33
NECTIN1-207ENST00000532197 KRT28Q7Z3Y7 464 aa12.96□□□□□ -0.33
NECTIN1-207ENST00000532197 ATRNO75882 1429 aa12.96□□□□□ -0.34
NECTIN1-207ENST00000532197 SBNO2Q9Y2G9 1366 aa12.95□□□□□ -0.34
NECTIN1-207ENST00000532197 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
NECTIN1-207ENST00000532197 CDK19Q9BWU1 502 aa12.95□□□□□ -0.34
NECTIN1-207ENST00000532197 TNS3Q68CZ2 1445 aa12.95□□□□□ -0.34
NECTIN1-207ENST00000532197 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
NECTIN1-207ENST00000532197 ABCA3Q99758 1704 aa12.94□□□□□ -0.34
NECTIN1-207ENST00000532197 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
NECTIN1-207ENST00000532197 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
NECTIN1-207ENST00000532197 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
NECTIN1-207ENST00000532197 ATAD2Q6PL18 1390 aa12.93□□□□□ -0.34
NECTIN1-207ENST00000532197 EVC2Q86UK5 1308 aa12.92□□□□□ -0.34
NECTIN1-207ENST00000532197 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
NECTIN1-207ENST00000532197 PLEKHG3A1L390 1219 aa12.92□□□□□ -0.34
NECTIN1-207ENST00000532197 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
NECTIN1-207ENST00000532197 CARD11Q9BXL7 1154 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms