RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 PRAM1Q96QH2 718 aa29.73■■■□□ 2.35
CCS-207ENST00000531990 SLAIN2Q9P270 581 aa29.73■■■□□ 2.35
CCS-207ENST00000531990 TIMELESSQ9UNS1 1208 aa29.73■■■□□ 2.35
CCS-207ENST00000531990 PLEKHH1Q9ULM0 1364 aa29.73■■■□□ 2.35
CCS-207ENST00000531990 NBPF8Q3BBV2 869 aa29.7■■■□□ 2.35
CCS-207ENST00000531990 ARHGEF28Q8N1W1 1705 aaKnown RBP29.7■■■□□ 2.34
CCS-207ENST00000531990 ROCK2O75116 1388 aaKnown RBP29.69■■■□□ 2.34
CCS-207ENST00000531990 CDC42BPGQ6DT37 1551 aa29.68■■■□□ 2.34
CCS-207ENST00000531990 SAFB2Q14151 953 aaKnown RBP eCLIP29.67■■■□□ 2.34
CCS-207ENST00000531990 ROBO1Q9Y6N7 1651 aa29.66■■■□□ 2.34
CCS-207ENST00000531990 MST1RQ04912 1400 aa29.63■■■□□ 2.33
CCS-207ENST00000531990 RALGAPBQ86X10 1494 aa29.62■■■□□ 2.33
CCS-207ENST00000531990 GPRASP1Q5JY77 1395 aa29.59■■■□□ 2.33
CCS-207ENST00000531990 ADGRB2O60241 1585 aa29.58■■■□□ 2.33
CCS-207ENST00000531990 FMN2Q9NZ56 1722 aa29.57■■■□□ 2.32
CCS-207ENST00000531990 MINK1Q8N4C8 1332 aaPredicted RBP29.57■■■□□ 2.32
CCS-207ENST00000531990 HSPA1LP34931 641 aa29.57■■■□□ 2.32
CCS-207ENST00000531990 CARD11Q9BXL7 1154 aa29.57■■■□□ 2.32
CCS-207ENST00000531990 C1orf167Q5SNV9 1468 aa29.56■■■□□ 2.32
CCS-207ENST00000531990 EIF3AQ14152 1382 aaKnown RBP29.56■■■□□ 2.32
CCS-207ENST00000531990 CENPJQ9HC77 1338 aaPredicted RBP29.55■■■□□ 2.32
CCS-207ENST00000531990 HIRIP3Q9BW71 556 aaPredicted RBP29.54■■■□□ 2.32
CCS-207ENST00000531990 BRINP3Q76B58 766 aa29.53■■■□□ 2.32
CCS-207ENST00000531990 QRICH2Q9H0J4 1663 aa29.51■■■□□ 2.31
CCS-207ENST00000531990 NUTM2FA1L443 756 aa29.51■■■□□ 2.31
CCS-207ENST00000531990 PHLPP1O60346 1717 aa29.49■■■□□ 2.31
CCS-207ENST00000531990 WASLO00401 505 aaPredicted RBP29.48■■■□□ 2.31
CCS-207ENST00000531990 ESCO1Q5FWF5 840 aa29.48■■■□□ 2.31
CCS-207ENST00000531990 ORAI2Q96SN7 254 aa29.47■■■□□ 2.31
CCS-207ENST00000531990 AHDC1Q5TGY3 1603 aaPredicted RBP29.46■■■□□ 2.31
CCS-207ENST00000531990 NHSL1Q5SYE7 1610 aa29.45■■■□□ 2.3
CCS-207ENST00000531990 ANKARQ7Z5J8 1434 aa29.45■■■□□ 2.3
CCS-207ENST00000531990 RGPD8O14715 1765 aaPredicted RBP29.44■■■□□ 2.3
CCS-207ENST00000531990 TULP4Q9NRJ4 1543 aa29.42■■■□□ 2.3
CCS-207ENST00000531990 KIF1AQ12756 1690 aa29.41■■■□□ 2.3
CCS-207ENST00000531990 CDK19Q9BWU1 502 aa29.4■■■□□ 2.3
CCS-207ENST00000531990 USP32Q8NFA0 1604 aa29.4■■■□□ 2.3
CCS-207ENST00000531990 COL16A1Q07092 1604 aaPredicted RBP29.39■■■□□ 2.3
CCS-207ENST00000531990 ITSN1Q15811 1721 aa29.37■■■□□ 2.29
CCS-207ENST00000531990 PHF8Q9UPP1 1060 aa29.36■■■□□ 2.29
CCS-207ENST00000531990 NPHP3Q7Z494 1330 aa29.36■■■□□ 2.29
CCS-207ENST00000531990 SRPK2P78362 688 aaKnown RBP29.35■■■□□ 2.29
CCS-207ENST00000531990 EVC2Q86UK5 1308 aa29.35■■■□□ 2.29
CCS-207ENST00000531990 DDX17Q92841 729 aaKnown RBP29.34■■■□□ 2.29
CCS-207ENST00000531990 PRR36Q9H6K5 1346 aa29.34■■■□□ 2.29
CCS-207ENST00000531990 SBNO2Q9Y2G9 1366 aa29.34■■■□□ 2.29
CCS-207ENST00000531990 FOXO3O43524 673 aa29.33■■■□□ 2.29
CCS-207ENST00000531990 NUDT16Q96DE0 195 aaKnown RBP29.33■■■□□ 2.29
CCS-207ENST00000531990 USP47Q96K76 1375 aa29.33■■■□□ 2.29
CCS-207ENST00000531990 ATP7BP35670 1465 aa29.32■■■□□ 2.28
CCS-207ENST00000531990 JCADQ9P266 1359 aa29.3■■■□□ 2.28
CCS-207ENST00000531990 LRRC59Q96AG4 307 aaKnown RBP29.3■■■□□ 2.28
CCS-207ENST00000531990 SOS2Q07890 1332 aaPredicted RBP29.29■■■□□ 2.28
CCS-207ENST00000531990 ST20-MTHFSA0A0A6YYL1 179 aa29.29■■■□□ 2.28
CCS-207ENST00000531990 PMFBP1Q8TBY8 1022 aa29.29■■■□□ 2.28
CCS-207ENST00000531990 CABP2Q9NPB3 220 aa29.29■■■□□ 2.28
CCS-207ENST00000531990 CCDC61Q9Y6R9 512 aa29.28■■■□□ 2.28
CCS-207ENST00000531990 SLC24A1O60721 1099 aa29.27■■■□□ 2.28
CCS-207ENST00000531990 TOPAZ1Q8N9V7 1692 aa29.27■■■□□ 2.28
CCS-207ENST00000531990 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
CCS-207ENST00000531990 PXDNQ92626 1479 aa29.25■■■□□ 2.27
CCS-207ENST00000531990 NGDNQ8NEJ9 315 aaKnown RBP29.25■■■□□ 2.27
CCS-207ENST00000531990 XPCQ01831 940 aaPredicted RBP29.24■■■□□ 2.27
CCS-207ENST00000531990 PSME1Q06323 249 aa29.24■■■□□ 2.27
CCS-207ENST00000531990 KRT28Q7Z3Y7 464 aa29.23■■■□□ 2.27
CCS-207ENST00000531990 PPIP5K1Q6PFW1 1433 aa29.2■■■□□ 2.27
CCS-207ENST00000531990 TESK2Q96S53 571 aa29.2■■■□□ 2.26
CCS-207ENST00000531990 ATAD2Q6PL18 1390 aa29.19■■■□□ 2.26
CCS-207ENST00000531990 PLEKHG3A1L390 1219 aa29.18■■■□□ 2.26
CCS-207ENST00000531990 SPATA31A6Q5VVP1 1343 aa29.18■■■□□ 2.26
CCS-207ENST00000531990 EIF4G2P78344 907 aaKnown RBP eCLIP29.17■■■□□ 2.262e-6■■■■■ 26.9
CCS-207ENST00000531990 PNPLA6Q8IY17 1366 aa29.16■■■□□ 2.26
CCS-207ENST00000531990 ACEP12821 1306 aa29.16■■■□□ 2.26
CCS-207ENST00000531990 TMF1P82094 1093 aa29.15■■■□□ 2.26
CCS-207ENST00000531990 CABP1Q9NZU7 370 aa29.15■■■□□ 2.26
CCS-207ENST00000531990 SBNO1A3KN83 1393 aa29.14■■■□□ 2.26
CCS-207ENST00000531990 POLR3AO14802 1390 aaPredicted RBP29.14■■■□□ 2.26
CCS-207ENST00000531990 MED1Q15648 1581 aaPredicted RBP29.14■■■□□ 2.26
CCS-207ENST00000531990 PUS7Q96PZ0 661 aaKnown RBP29.13■■■□□ 2.25
CCS-207ENST00000531990 SPATA31A3Q5VYP0 1347 aa29.13■■■□□ 2.25
CCS-207ENST00000531990 TNS3Q68CZ2 1445 aa29.12■■■□□ 2.25
CCS-207ENST00000531990 DISP3Q9P2K9 1392 aa29.12■■■□□ 2.25
CCS-207ENST00000531990 TRPM3Q9HCF6 1732 aaPredicted RBP29.11■■■□□ 2.25
CCS-207ENST00000531990 COL22A1Q8NFW1 1626 aaPredicted RBP29.09■■■□□ 2.25
CCS-207ENST00000531990 CDCA8Q53HL2 280 aa29.09■■■□□ 2.25
CCS-207ENST00000531990 LMOD2Q6P5Q4 547 aa29.09■■■□□ 2.25
CCS-207ENST00000531990 NUTM2BA6NNL0 878 aaPredicted RBP29.08■■■□□ 2.25
CCS-207ENST00000531990 NUTM2EB1AL46 878 aaPredicted RBP29.08■■■□□ 2.25
CCS-207ENST00000531990 PAK3O75914 559 aaPredicted RBP29.08■■■□□ 2.25
CCS-207ENST00000531990 HSPA5P11021 654 aaKnown RBP29.08■■■□□ 2.25
CCS-207ENST00000531990 NUTM2AQ8IVF1 878 aaPredicted RBP29.08■■■□□ 2.25
CCS-207ENST00000531990 ARHGEF10O15013 1369 aa29.08■■■□□ 2.25
CCS-207ENST00000531990 TMC1Q8TDI8 760 aa29.06■■■□□ 2.24
CCS-207ENST00000531990 MEX3CQ5U5Q3 659 aaKnown RBP29.04■■■□□ 2.24
CCS-207ENST00000531990 ZNF692Q9BU19 519 aaPredicted RBP29.04■■■□□ 2.24
CCS-207ENST00000531990 ALS2Q96Q42 1657 aa29.04■■■□□ 2.24
CCS-207ENST00000531990 AKAP12Q02952 1782 aa29.03■■■□□ 2.24
CCS-207ENST00000531990 BRD4O60885 1362 aaPredicted RBP29.03■■■□□ 2.24
CCS-207ENST00000531990 LRP6O75581 1613 aa29.03■■■□□ 2.24
CCS-207ENST00000531990 ILDR2Q71H61 639 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms