RNA–Protein interactions for RNA: ENST00000531920.6

MED17-208, Transcript of mediator complex subunit 17, human

TSL 3

Gene MED17, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-208	ENST00000531920	NPDC1	Q9NQX5	325 aa	Predicted RBP	8.33	□□□□□ -1.08
MED17-208	ENST00000531920	C11orf95	C9JLR9	678 aa	Predicted RBP	8.32	□□□□□ -1.08
MED17-208	ENST00000531920	C1orf115	Q9H7X2	142 aa		8.32	□□□□□ -1.08
MED17-208	ENST00000531920	TOR4A	Q9NXH8	423 aa		8.32	□□□□□ -1.08
MED17-208	ENST00000531920	ARID3C	A6NKF2	412 aa		8.31	□□□□□ -1.08
MED17-208	ENST00000531920	PTGDR	Q13258	359 aa		8.31	□□□□□ -1.08
MED17-208	ENST00000531920	GIGYF2	Q6Y7W6	1299 aa	Known RBP	8.31	□□□□□ -1.08
MED17-208	ENST00000531920	MS4A1	P11836	297 aa		8.3	□□□□□ -1.08
MED17-208	ENST00000531920	SMCP	P49901	116 aa	Predicted RBP	8.3	□□□□□ -1.08
MED17-208	ENST00000531920	FLII	Q13045	1269 aa		8.3	□□□□□ -1.08
MED17-208	ENST00000531920	REPIN1	Q9BWE0	567 aa	Known RBP	8.3	□□□□□ -1.08
MED17-208	ENST00000531920	PODXL2	Q9NZ53	605 aa		8.3	□□□□□ -1.08
MED17-208	ENST00000531920	APBB1	O00213	710 aa		8.28	□□□□□ -1.08
MED17-208	ENST00000531920	ACTN4	O43707	911 aa	Known RBP	8.28	□□□□□ -1.08
MED17-208	ENST00000531920	CTC1	Q2NKJ3	1217 aa		8.28	□□□□□ -1.08
MED17-208	ENST00000531920	PADI6	Q6TGC4	694 aa		8.28	□□□□□ -1.08
MED17-208	ENST00000531920	AXIN1	O15169	862 aa		8.27	□□□□□ -1.09
MED17-208	ENST00000531920	ADH1B	P00325	375 aa		8.27	□□□□□ -1.09
MED17-208	ENST00000531920	PCMTD1	Q96MG8	357 aa	Predicted RBP	8.27	□□□□□ -1.09
MED17-208	ENST00000531920	GOPC	Q9HD26	462 aa		8.27	□□□□□ -1.09
MED17-208	ENST00000531920	TERT	O14746	1132 aa	Known RBP	8.26	□□□□□ -1.09
MED17-208	ENST00000531920	FOXC1	Q12948	553 aa		8.26	□□□□□ -1.09
MED17-208	ENST00000531920	SLC4A3	P48751	1232 aa		8.25	□□□□□ -1.09
MED17-208	ENST00000531920	CLUAP1	Q96AJ1	413 aa		8.25	□□□□□ -1.09
MED17-208	ENST00000531920	LOR	P23490	312 aa	Predicted RBP	8.24	□□□□□ -1.09
MED17-208	ENST00000531920	SLC6A16	Q9GZN6	736 aa		8.24	□□□□□ -1.09
MED17-208	ENST00000531920	MDM2	Q00987	491 aa	Predicted RBP	8.23	□□□□□ -1.09
MED17-208	ENST00000531920	TRIM26	Q12899	539 aa	Predicted RBP	8.23	□□□□□ -1.09
MED17-208	ENST00000531920	RPIA	P49247	311 aa		8.22	□□□□□ -1.09
MED17-208	ENST00000531920	ATP1B4	Q9UN42	357 aa	Predicted RBP	8.22	□□□□□ -1.09
MED17-208	ENST00000531920	SNRPB	P14678	240 aa	Known RBP	8.21	□□□□□ -1.1
MED17-208	ENST00000531920	CLCN1	P35523	988 aa		8.21	□□□□□ -1.1
MED17-208	ENST00000531920	SSTR3	P32745	418 aa	Predicted RBP	8.2	□□□□□ -1.1
MED17-208	ENST00000531920	SH3D19	Q5HYK7	790 aa		8.2	□□□□□ -1.1
MED17-208	ENST00000531920	PHOX2B	Q99453	314 aa		8.2	□□□□□ -1.1
MED17-208	ENST00000531920	GPCPD1	Q9NPB8	672 aa		8.2	□□□□□ -1.1
MED17-208	ENST00000531920	KMT5B	Q4FZB7	885 aa		8.19	□□□□□ -1.1
MED17-208	ENST00000531920		A6NJR5	290 aa		8.18	□□□□□ -1.1
MED17-208	ENST00000531920	TRAK2	O60296	914 aa		8.18	□□□□□ -1.1
MED17-208	ENST00000531920	NR1I2	O75469	434 aa		8.18	□□□□□ -1.1
MED17-208	ENST00000531920	SUZ12	Q15022	739 aa	Known RBP	8.18	□□□□□ -1.1
MED17-208	ENST00000531920	FAM161A	Q3B820	660 aa		8.18	□□□□□ -1.1
MED17-208	ENST00000531920	SCUBE3	Q8IX30	993 aa		8.18	□□□□□ -1.1
MED17-208	ENST00000531920	CYP4X1	Q8N118	509 aa		8.18	□□□□□ -1.1
MED17-208	ENST00000531920	TMEM134	Q9H6X4	195 aa		8.18	□□□□□ -1.1
MED17-208	ENST00000531920	ATP13A2	Q9NQ11	1180 aa		8.18	□□□□□ -1.1
MED17-208	ENST00000531920	SLC10A3	P09131	477 aa		8.17	□□□□□ -1.1
MED17-208	ENST00000531920	DNAJB2	P25686	324 aa		8.17	□□□□□ -1.1
MED17-208	ENST00000531920	MCM6	Q14566	821 aa		8.17	□□□□□ -1.1
MED17-208	ENST00000531920	SKIV2L	Q15477	1246 aa	Known RBP	8.17	□□□□□ -1.1
MED17-208	ENST00000531920	CCDC82	Q8N4S0	544 aa		8.17	□□□□□ -1.1
MED17-208	ENST00000531920	NLRP7	Q8WX94	980 aa		8.17	□□□□□ -1.1
MED17-208	ENST00000531920	TRIM47	Q96LD4	638 aa		8.17	□□□□□ -1.1
MED17-208	ENST00000531920	BEGAIN	Q9BUH8	593 aa		8.17	□□□□□ -1.1
MED17-208	ENST00000531920	HRC	P23327	699 aa		8.16	□□□□□ -1.1
MED17-208	ENST00000531920	PROCA1	Q8NCQ7	364 aa	Predicted RBP	8.16	□□□□□ -1.1
MED17-208	ENST00000531920	POLR3E	Q9NVU0	708 aa		8.16	□□□□□ -1.1
MED17-208	ENST00000531920	CD2BP2	O95400	341 aa	Known RBP	8.15	□□□□□ -1.1
MED17-208	ENST00000531920	CFH	P08603	1231 aa		8.15	□□□□□ -1.1
MED17-208	ENST00000531920	FAM181B	A6NEQ2	426 aa		8.14	□□□□□ -1.11
MED17-208	ENST00000531920	RBM46	Q8TBY0	533 aa	Known RBP	8.14	□□□□□ -1.11
MED17-208	ENST00000531920	SMPD1	P17405	629 aa		8.13	□□□□□ -1.11
MED17-208	ENST00000531920	SPSB2	Q99619	263 aa		8.13	□□□□□ -1.11
MED17-208	ENST00000531920	FAM217B	Q9NTX9	383 aa	Predicted RBP	8.13	□□□□□ -1.11
MED17-208	ENST00000531920	METTL3	Q86U44	580 aa	Known RBP	8.12	□□□□□ -1.11
MED17-208	ENST00000531920	POM121	Q96HA1	1249 aa		8.12	□□□□□ -1.11
MED17-208	ENST00000531920	SENP2	Q9HC62	589 aa		8.12	□□□□□ -1.11
MED17-208	ENST00000531920	ZNF777	Q9ULD5	760 aa	Predicted RBP	8.12	□□□□□ -1.11
MED17-208	ENST00000531920	PROSER2	Q86WR7	435 aa	Predicted RBP	8.11	□□□□□ -1.11
MED17-208	ENST00000531920	ZSCAN1	Q8NBB4	408 aa		8.11	□□□□□ -1.11
MED17-208	ENST00000531920	OAT	P04181	439 aa		8.1	□□□□□ -1.11
MED17-208	ENST00000531920	ADGRG1	Q9Y653	693 aa		8.1	□□□□□ -1.11
MED17-208	ENST00000531920	RCCD1	A6NED2	376 aa		8.09	□□□□□ -1.11
MED17-208	ENST00000531920	RAD21	O60216	631 aa		8.09	□□□□□ -1.11
MED17-208	ENST00000531920	PDIA4	P13667	645 aa	Known RBP	8.09	□□□□□ -1.11
MED17-208	ENST00000531920	GMPR	P36959	345 aa		8.09	□□□□□ -1.11
MED17-208	ENST00000531920	MYSM1	Q5VVJ2	828 aa		8.09	□□□□□ -1.11
MED17-208	ENST00000531920	TTC24	A2A3L6	582 aa	Predicted RBP	8.08	□□□□□ -1.12
MED17-208	ENST00000531920	PXYLP1	Q8TE99	480 aa		8.08	□□□□□ -1.12
MED17-208	ENST00000531920	THAP11	Q96EK4	314 aa		8.08	□□□□□ -1.12
MED17-208	ENST00000531920	FCF1	Q9Y324	198 aa	Known RBP	8.08	□□□□□ -1.12
MED17-208	ENST00000531920	CLK2	P49760	499 aa	Known RBP	8.07	□□□□□ -1.12
MED17-208	ENST00000531920	PUS10	Q3MIT2	529 aa	Known RBP	8.07	□□□□□ -1.12
MED17-208	ENST00000531920	FAM160A2	Q8N612	972 aa	Predicted RBP	8.07	□□□□□ -1.12
MED17-208	ENST00000531920	SNIP1	Q8TAD8	396 aa	Known RBP	8.07	□□□□□ -1.12
MED17-208	ENST00000531920	KIFC2	Q96AC6	838 aa		8.07	□□□□□ -1.12
MED17-208	ENST00000531920	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	8.07	□□□□□ -1.12
MED17-208	ENST00000531920	WNT7A	O00755	349 aa		8.06	□□□□□ -1.12
MED17-208	ENST00000531920	FNBP4	Q8N3X1	1017 aa	Predicted RBP	8.06	□□□□□ -1.12
MED17-208	ENST00000531920	TBC1D2	Q9BYX2	928 aa		8.06	□□□□□ -1.12
MED17-208	ENST00000531920	SLC16A10	Q8TF71	515 aa		8.05	□□□□□ -1.12
MED17-208	ENST00000531920	SNRK	Q9NRH2	765 aa		8.05	□□□□□ -1.12
MED17-208	ENST00000531920	NXF1	Q9UBU9	619 aa	Known RBP	8.05	□□□□□ -1.12
MED17-208	ENST00000531920	SPDYE5	A6NIY4	337 aa		8.04	□□□□□ -1.12
MED17-208	ENST00000531920		J3QL48	77 aa		8.04	□□□□□ -1.12
MED17-208	ENST00000531920	COG6	Q9Y2V7	657 aa		8.04	□□□□□ -1.12
MED17-208	ENST00000531920	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	8.03	□□□□□ -1.12
MED17-208	ENST00000531920	RFC5	P40937	340 aa		8.03	□□□□□ -1.12
MED17-208	ENST00000531920	FBXO31	Q5XUX0	539 aa	Predicted RBP	8.03	□□□□□ -1.12
MED17-208	ENST00000531920	NPAS3	Q8IXF0	933 aa		8.03	□□□□□ -1.12

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms