RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 MARF1Q9Y4F3 1742 aaKnown RBP26.09■■□□□ 1.77
PKP3-208ENST00000531857 IFT172Q9UG01 1749 aa26.08■■□□□ 1.77
PKP3-208ENST00000531857 USP21Q9UK80 565 aa26.08■■□□□ 1.77
PKP3-208ENST00000531857 ADGRF5Q8IZF2 1346 aa26.06■■□□□ 1.76
PKP3-208ENST00000531857 ESCO1Q5FWF5 840 aa26.05■■□□□ 1.76
PKP3-208ENST00000531857 PXDNQ92626 1479 aa26.04■■□□□ 1.76
PKP3-208ENST00000531857 FNBP4Q8N3X1 1017 aaPredicted RBP26.04■■□□□ 1.76
PKP3-208ENST00000531857 MYOM2P54296 1465 aa26.03■■□□□ 1.76
PKP3-208ENST00000531857 TRPC5Q9UL62 973 aaPredicted RBP26.02■■□□□ 1.76
PKP3-208ENST00000531857 ATRNO75882 1429 aa26.01■■□□□ 1.75
PKP3-208ENST00000531857 XPCQ01831 940 aaPredicted RBP26.01■■□□□ 1.75
PKP3-208ENST00000531857 RGL3Q3MIN7 710 aa26.01■■□□□ 1.75
PKP3-208ENST00000531857 KNDC1Q76NI1 1749 aa26.01■■□□□ 1.75
PKP3-208ENST00000531857 NPHP3Q7Z494 1330 aa26.01■■□□□ 1.75
PKP3-208ENST00000531857 WAPLQ7Z5K2 1190 aa26.01■■□□□ 1.75
PKP3-208ENST00000531857 STK26Q9P289 416 aa26.01■■□□□ 1.75
PKP3-208ENST00000531857 SPATA31E1Q6ZUB1 1445 aa26■■□□□ 1.75
PKP3-208ENST00000531857 FOXO3O43524 673 aa26■■□□□ 1.75
PKP3-208ENST00000531857 CCDC144AA2RUR9 1427 aa25.99■■□□□ 1.75
PKP3-208ENST00000531857 NUTM2FA1L443 756 aa25.99■■□□□ 1.75
PKP3-208ENST00000531857 TECPR2O15040 1411 aa25.98■■□□□ 1.75
PKP3-208ENST00000531857 ATAD2Q6PL18 1390 aa25.98■■□□□ 1.75
PKP3-208ENST00000531857 FMN2Q9NZ56 1722 aa25.98■■□□□ 1.75
PKP3-208ENST00000531857 RGPD8O14715 1765 aaPredicted RBP25.97■■□□□ 1.75
PKP3-208ENST00000531857 BCL9LQ86UU0 1499 aa25.97■■□□□ 1.75
PKP3-208ENST00000531857 LRPPRCP42704 1394 aaKnown RBP25.96■■□□□ 1.75
PKP3-208ENST00000531857 PLEKHH1Q9ULM0 1364 aa25.96■■□□□ 1.75
PKP3-208ENST00000531857 TMEM132EQ6IEE7 984 aa25.96■■□□□ 1.75
PKP3-208ENST00000531857 ANKRD30BQ9BXX2 1392 aa25.94■■□□□ 1.74
PKP3-208ENST00000531857 MPHOSPH9Q99550 1183 aa25.93■■□□□ 1.74
PKP3-208ENST00000531857 ABCC11Q96J66 1382 aa25.93■■□□□ 1.74
PKP3-208ENST00000531857 PIK3C2GO75747 1445 aa25.92■■□□□ 1.74
PKP3-208ENST00000531857 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.91■■□□□ 1.74
PKP3-208ENST00000531857 EP400Q96L91 3159 aa25.91■■□□□ 1.74
PKP3-208ENST00000531857 KIF1AQ12756 1690 aa25.91■■□□□ 1.74
PKP3-208ENST00000531857 YTHDC2Q9H6S0 1430 aaKnown RBP25.89■■□□□ 1.74
PKP3-208ENST00000531857 GJD4Q96KN9 370 aaPredicted RBP25.86■■□□□ 1.73
PKP3-208ENST00000531857 SPATA31A3Q5VYP0 1347 aa25.86■■□□□ 1.73
PKP3-208ENST00000531857 BRWD3Q6RI45 1802 aa25.85■■□□□ 1.73
PKP3-208ENST00000531857 GLI3P10071 1580 aa25.85■■□□□ 1.73
PKP3-208ENST00000531857 USP32Q8NFA0 1604 aa25.85■■□□□ 1.73
PKP3-208ENST00000531857 SLIT2O94813 1529 aa25.83■■□□□ 1.72
PKP3-208ENST00000531857 KRT28Q7Z3Y7 464 aa25.82■■□□□ 1.72
PKP3-208ENST00000531857 SRCAPQ6ZRS2 3230 aa25.81■■□□□ 1.72
PKP3-208ENST00000531857 RALGAPBQ86X10 1494 aa25.8■■□□□ 1.72
PKP3-208ENST00000531857 UNC5CLQ8IV45 518 aa25.8■■□□□ 1.72
PKP3-208ENST00000531857 SIRT1Q96EB6 747 aa25.8■■□□□ 1.72
PKP3-208ENST00000531857 C14orf93Q9H972 538 aaKnown RBP25.8■■□□□ 1.72
PKP3-208ENST00000531857 ABCA3Q99758 1704 aa25.8■■□□□ 1.72
PKP3-208ENST00000531857 NRXN1Q9ULB1 1477 aa25.79■■□□□ 1.72
PKP3-208ENST00000531857 PLCH1Q4KWH8 1693 aa25.79■■□□□ 1.72
PKP3-208ENST00000531857 CFAP70Q5T0N1 1121 aa25.78■■□□□ 1.72
PKP3-208ENST00000531857 CCDC125Q86Z20 511 aa25.77■■□□□ 1.72
PKP3-208ENST00000531857 PHF8Q9UPP1 1060 aa25.77■■□□□ 1.72
PKP3-208ENST00000531857 CABLES1Q8TDN4 633 aa25.76■■□□□ 1.71
PKP3-208ENST00000531857 ZRANB1Q9UGI0 708 aa25.76■■□□□ 1.71
PKP3-208ENST00000531857 TNS3Q68CZ2 1445 aa25.76■■□□□ 1.71
PKP3-208ENST00000531857 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
PKP3-208ENST00000531857 DHX57Q6P158 1386 aaKnown RBP25.74■■□□□ 1.71
PKP3-208ENST00000531857 PLEKHG5O94827 1062 aa25.74■■□□□ 1.71
PKP3-208ENST00000531857 SAFB2Q14151 953 aaKnown RBP eCLIP25.74■■□□□ 1.71
PKP3-208ENST00000531857 PRAM1Q96QH2 718 aa25.72■■□□□ 1.71
PKP3-208ENST00000531857 PSME1Q06323 249 aa25.71■■□□□ 1.71
PKP3-208ENST00000531857 HAP1P54257 671 aaPredicted RBP25.7■■□□□ 1.7
PKP3-208ENST00000531857 SBNO1A3KN83 1393 aa25.69■■□□□ 1.7
PKP3-208ENST00000531857 DLC1Q96QB1 1528 aa25.68■■□□□ 1.7
PKP3-208ENST00000531857 LMOD2Q6P5Q4 547 aa25.68■■□□□ 1.7
PKP3-208ENST00000531857 BLMP54132 1417 aaPredicted RBP25.68■■□□□ 1.7
PKP3-208ENST00000531857 TRPM3Q9HCF6 1732 aaPredicted RBP25.68■■□□□ 1.7
PKP3-208ENST00000531857 ADGRB2O60241 1585 aa25.67■■□□□ 1.7
PKP3-208ENST00000531857 VPS72Q15906 364 aa25.67■■□□□ 1.7
PKP3-208ENST00000531857 SEPT12Q8IYM1 358 aa25.67■■□□□ 1.7
PKP3-208ENST00000531857 PMFBP1Q8TBY8 1022 aa25.66■■□□□ 1.7
PKP3-208ENST00000531857 ADGRB1O14514 1584 aa25.65■■□□□ 1.7
PKP3-208ENST00000531857 POGKQ9P215 609 aa25.65■■□□□ 1.7
PKP3-208ENST00000531857 NRAPQ86VF7 1730 aa25.65■■□□□ 1.7
PKP3-208ENST00000531857 DEFB132Q7Z7B7 95 aa25.64■■□□□ 1.7
PKP3-208ENST00000531857 ARHGEF10O15013 1369 aa25.64■■□□□ 1.69
PKP3-208ENST00000531857 ANKARQ7Z5J8 1434 aa25.63■■□□□ 1.69
PKP3-208ENST00000531857 FAM83GA6ND36 823 aa25.63■■□□□ 1.69
PKP3-208ENST00000531857 CCDC9Q9Y3X0 531 aaKnown RBP25.63■■□□□ 1.69
PKP3-208ENST00000531857 ALS2Q96Q42 1657 aa25.63■■□□□ 1.69
PKP3-208ENST00000531857 ONECUT3O60422 494 aaPredicted RBP25.62■■□□□ 1.69
PKP3-208ENST00000531857 ACIN1Q9UKV3 1341 aaKnown RBP25.62■■□□□ 1.69
PKP3-208ENST00000531857 HIRIP3Q9BW71 556 aaPredicted RBP25.61■■□□□ 1.69
PKP3-208ENST00000531857 TRAK1Q9UPV9 953 aa25.6■■□□□ 1.69
PKP3-208ENST00000531857 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
PKP3-208ENST00000531857 CRYBG1Q9Y4K1 1723 aa25.57■■□□□ 1.68
PKP3-208ENST00000531857 KRT27Q7Z3Y8 459 aa25.57■■□□□ 1.68
PKP3-208ENST00000531857 MINK1Q8N4C8 1332 aaPredicted RBP25.57■■□□□ 1.68
PKP3-208ENST00000531857 PRR36Q9H6K5 1346 aa25.57■■□□□ 1.68
PKP3-208ENST00000531857 COL14A1Q05707 1796 aaKnown RBP25.56■■□□□ 1.68
PKP3-208ENST00000531857 TULP4Q9NRJ4 1543 aa25.55■■□□□ 1.68
PKP3-208ENST00000531857 SF3B2Q13435 895 aaKnown RBP25.55■■□□□ 1.68
PKP3-208ENST00000531857 KDM2AQ9Y2K7 1162 aa25.55■■□□□ 1.68
PKP3-208ENST00000531857 BTG4Q9NY30 223 aa25.53■■□□□ 1.68
PKP3-208ENST00000531857 FAM98CQ17RN3 349 aaKnown RBP25.52■■□□□ 1.68
PKP3-208ENST00000531857 GPRASP1Q5JY77 1395 aa25.52■■□□□ 1.68
PKP3-208ENST00000531857 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.68
PKP3-208ENST00000531857 A0A0G2JS52 829 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms