RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 TRPC5Q9UL62 973 aaPredicted RBP28.6■■■□□ 2.17
UBXN1-212ENST00000531625 COL22A1Q8NFW1 1626 aaPredicted RBP28.6■■■□□ 2.17
UBXN1-212ENST00000531625 NPHP3Q7Z494 1330 aa28.6■■■□□ 2.17
UBXN1-212ENST00000531625 SRCAPQ6ZRS2 3230 aa28.57■■■□□ 2.16
UBXN1-212ENST00000531625 ESCO1Q5FWF5 840 aa28.57■■■□□ 2.16
UBXN1-212ENST00000531625 MYOM2P54296 1465 aa28.56■■■□□ 2.16
UBXN1-212ENST00000531625 TECPR2O15040 1411 aa28.55■■■□□ 2.16
UBXN1-212ENST00000531625 ADGRF5Q8IZF2 1346 aa28.55■■■□□ 2.16
UBXN1-212ENST00000531625 ATRNO75882 1429 aa28.54■■■□□ 2.16
UBXN1-212ENST00000531625 ATAD2Q6PL18 1390 aa28.54■■■□□ 2.16
UBXN1-212ENST00000531625 PXDNQ92626 1479 aa28.53■■■□□ 2.16
UBXN1-212ENST00000531625 CCDC144AA2RUR9 1427 aa28.53■■■□□ 2.16
UBXN1-212ENST00000531625 FOXD1Q16676 465 aa28.53■■■□□ 2.16
UBXN1-212ENST00000531625 SPATA31E1Q6ZUB1 1445 aa28.52■■■□□ 2.16
UBXN1-212ENST00000531625 ANKRD30BQ9BXX2 1392 aa28.52■■■□□ 2.16
UBXN1-212ENST00000531625 LRPPRCP42704 1394 aaKnown RBP28.51■■■□□ 2.16
UBXN1-212ENST00000531625 ABCC11Q96J66 1382 aa28.5■■■□□ 2.15
UBXN1-212ENST00000531625 FOXO3O43524 673 aa28.5■■■□□ 2.15
UBXN1-212ENST00000531625 WAPLQ7Z5K2 1190 aa28.49■■■□□ 2.15
UBXN1-212ENST00000531625 EP400Q96L91 3159 aa28.49■■■□□ 2.15
UBXN1-212ENST00000531625 RGL3Q3MIN7 710 aa28.48■■■□□ 2.15
UBXN1-212ENST00000531625 STK26Q9P289 416 aa28.48■■■□□ 2.15
UBXN1-212ENST00000531625 BCL9LQ86UU0 1499 aa28.47■■■□□ 2.15
UBXN1-212ENST00000531625 XPCQ01831 940 aaPredicted RBP28.45■■■□□ 2.14
UBXN1-212ENST00000531625 IFT172Q9UG01 1749 aa28.44■■■□□ 2.14
UBXN1-212ENST00000531625 MPHOSPH9Q99550 1183 aa28.44■■■□□ 2.14
UBXN1-212ENST00000531625 PIK3C2GO75747 1445 aa28.43■■■□□ 2.14
UBXN1-212ENST00000531625 KNDC1Q76NI1 1749 aa28.43■■■□□ 2.14
UBXN1-212ENST00000531625 MARF1Q9Y4F3 1742 aaKnown RBP28.43■■■□□ 2.14
UBXN1-212ENST00000531625 PLEKHH1Q9ULM0 1364 aa28.42■■■□□ 2.14
UBXN1-212ENST00000531625 NUTM2FA1L443 756 aa28.42■■■□□ 2.14
UBXN1-212ENST00000531625 TMEM132EQ6IEE7 984 aa28.42■■■□□ 2.14
UBXN1-212ENST00000531625 SIRT1Q96EB6 747 aa28.4■■■□□ 2.14
UBXN1-212ENST00000531625 GJD4Q96KN9 370 aaPredicted RBP28.4■■■□□ 2.14
UBXN1-212ENST00000531625 YTHDC2Q9H6S0 1430 aaKnown RBP28.39■■■□□ 2.14
UBXN1-212ENST00000531625 SPATA31A3Q5VYP0 1347 aa28.39■■■□□ 2.13
UBXN1-212ENST00000531625 FMN2Q9NZ56 1722 aa28.38■■■□□ 2.13
UBXN1-212ENST00000531625 CCDC125Q86Z20 511 aa28.38■■■□□ 2.13
UBXN1-212ENST00000531625 KIF1AQ12756 1690 aa28.35■■■□□ 2.13
UBXN1-212ENST00000531625 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.35■■■□□ 2.13
UBXN1-212ENST00000531625 UNC5CLQ8IV45 518 aa28.34■■■□□ 2.13
UBXN1-212ENST00000531625 C14orf93Q9H972 538 aaKnown RBP28.34■■■□□ 2.13
UBXN1-212ENST00000531625 SLIT2O94813 1529 aa28.33■■■□□ 2.13
UBXN1-212ENST00000531625 KRT28Q7Z3Y7 464 aa28.33■■■□□ 2.13
UBXN1-212ENST00000531625 ACIN1Q9UKV3 1341 aaKnown RBP28.33■■■□□ 2.13
UBXN1-212ENST00000531625 ZRANB1Q9UGI0 708 aa28.31■■■□□ 2.12
UBXN1-212ENST00000531625 NRXN1Q9ULB1 1477 aa28.3■■■□□ 2.12
UBXN1-212ENST00000531625 RALGAPBQ86X10 1494 aa28.29■■■□□ 2.12
UBXN1-212ENST00000531625 PHF8Q9UPP1 1060 aa28.28■■■□□ 2.12
UBXN1-212ENST00000531625 DHX57Q6P158 1386 aaKnown RBP28.27■■■□□ 2.12
UBXN1-212ENST00000531625 PSME1Q06323 249 aa28.27■■■□□ 2.12
UBXN1-212ENST00000531625 USP32Q8NFA0 1604 aa28.27■■■□□ 2.12
UBXN1-212ENST00000531625 GLI3P10071 1580 aa28.27■■■□□ 2.12
UBXN1-212ENST00000531625 TNS3Q68CZ2 1445 aa28.26■■■□□ 2.12
UBXN1-212ENST00000531625 CFAP70Q5T0N1 1121 aa28.25■■■□□ 2.11
UBXN1-212ENST00000531625 SBNO1A3KN83 1393 aa28.24■■■□□ 2.11
UBXN1-212ENST00000531625 RGPD8O14715 1765 aaPredicted RBP28.23■■■□□ 2.11
UBXN1-212ENST00000531625 VPS72Q15906 364 aa28.21■■■□□ 2.11
UBXN1-212ENST00000531625 PRAM1Q96QH2 718 aa28.21■■■□□ 2.11
UBXN1-212ENST00000531625 BLMP54132 1417 aaPredicted RBP28.2■■■□□ 2.11
UBXN1-212ENST00000531625 HAP1P54257 671 aaPredicted RBP28.2■■■□□ 2.1
UBXN1-212ENST00000531625 ARHGEF10O15013 1369 aa28.2■■■□□ 2.1
UBXN1-212ENST00000531625 CABLES1Q8TDN4 633 aa28.19■■■□□ 2.1
UBXN1-212ENST00000531625 DLC1Q96QB1 1528 aa28.18■■■□□ 2.1
UBXN1-212ENST00000531625 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
UBXN1-212ENST00000531625 ONECUT3O60422 494 aaPredicted RBP28.17■■■□□ 2.1
UBXN1-212ENST00000531625 NWD2Q9ULI1 1742 aa28.16■■■□□ 2.1
UBXN1-212ENST00000531625 SAFB2Q14151 953 aaKnown RBP eCLIP28.16■■■□□ 2.1
UBXN1-212ENST00000531625 SEPT12Q8IYM1 358 aa28.16■■■□□ 2.1
UBXN1-212ENST00000531625 BRWD3Q6RI45 1802 aa28.15■■■□□ 2.1
UBXN1-212ENST00000531625 POGKQ9P215 609 aa28.14■■■□□ 2.1
UBXN1-212ENST00000531625 LMOD2Q6P5Q4 547 aa28.13■■■□□ 2.09
UBXN1-212ENST00000531625 PLCH1Q4KWH8 1693 aa28.13■■■□□ 2.09
UBXN1-212ENST00000531625 ABCA3Q99758 1704 aa28.12■■■□□ 2.09
UBXN1-212ENST00000531625 ADGRB2O60241 1585 aa28.11■■■□□ 2.09
UBXN1-212ENST00000531625 PMFBP1Q8TBY8 1022 aa28.11■■■□□ 2.09
UBXN1-212ENST00000531625 FAM83GA6ND36 823 aa28.1■■■□□ 2.09
UBXN1-212ENST00000531625 ADGRB1O14514 1584 aa28.1■■■□□ 2.09
UBXN1-212ENST00000531625 CCDC9Q9Y3X0 531 aaKnown RBP28.09■■■□□ 2.09
UBXN1-212ENST00000531625 PLEKHG5O94827 1062 aa28.08■■■□□ 2.09
UBXN1-212ENST00000531625 SF3B2Q13435 895 aaKnown RBP28.08■■■□□ 2.09
UBXN1-212ENST00000531625 KRT27Q7Z3Y8 459 aa28.08■■■□□ 2.09
UBXN1-212ENST00000531625 DEFB132Q7Z7B7 95 aa28.07■■■□□ 2.08
UBXN1-212ENST00000531625 EIF3AQ14152 1382 aaKnown RBP28.06■■■□□ 2.08
UBXN1-212ENST00000531625 TRAK1Q9UPV9 953 aa28.05■■■□□ 2.08
UBXN1-212ENST00000531625 TRPM3Q9HCF6 1732 aaPredicted RBP28.04■■■□□ 2.08
UBXN1-212ENST00000531625 GPRASP1Q5JY77 1395 aa28.04■■■□□ 2.08
UBXN1-212ENST00000531625 RAB3GAP2Q9H2M9 1393 aa28.04■■■□□ 2.08
UBXN1-212ENST00000531625 HIRIP3Q9BW71 556 aaPredicted RBP28.03■■■□□ 2.08
UBXN1-212ENST00000531625 PRR36Q9H6K5 1346 aa28.01■■■□□ 2.07
UBXN1-212ENST00000531625 STAC3Q96MF2 364 aa28.01■■■□□ 2.07
UBXN1-212ENST00000531625 ALS2Q96Q42 1657 aa28■■■□□ 2.07
UBXN1-212ENST00000531625 MINK1Q8N4C8 1332 aaPredicted RBP28■■■□□ 2.07
UBXN1-212ENST00000531625 WASLO00401 505 aaPredicted RBP28■■■□□ 2.07
UBXN1-212ENST00000531625 BTG4Q9NY30 223 aa28■■■□□ 2.07
UBXN1-212ENST00000531625 TULP4Q9NRJ4 1543 aa28■■■□□ 2.07
UBXN1-212ENST00000531625 NRAPQ86VF7 1730 aa28■■■□□ 2.07
UBXN1-212ENST00000531625 COL14A1Q05707 1796 aaKnown RBP27.97■■■□□ 2.07
UBXN1-212ENST00000531625 FAM98CQ17RN3 349 aaKnown RBP27.97■■■□□ 2.07
UBXN1-212ENST00000531625 DCAF11Q8TEB1 546 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms