RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 OATP04181 439 aa5.1□□□□□ -1.59
RC3H1-206ENST00000531594 ATP6V1AP38606 617 aa5.1□□□□□ -1.59
RC3H1-206ENST00000531594 TRIM32Q13049 653 aa5.1□□□□□ -1.59
RC3H1-206ENST00000531594 RBM26Q5T8P6 1007 aaKnown RBP5.1□□□□□ -1.59
RC3H1-206ENST00000531594 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
RC3H1-206ENST00000531594 SNIP1Q8TAD8 396 aaKnown RBP5.09□□□□□ -1.59
RC3H1-206ENST00000531594 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
RC3H1-206ENST00000531594 GCGRP47871 477 aa5.08□□□□□ -1.6
RC3H1-206ENST00000531594 VEGFBP49765 207 aa5.08□□□□□ -1.6
RC3H1-206ENST00000531594 SKOR1P84550 965 aa5.08□□□□□ -1.6
RC3H1-206ENST00000531594 HLA-CQ95604 372 aa5.08□□□□□ -1.6
RC3H1-206ENST00000531594 DAXXQ9UER7 740 aaPredicted RBP5.08□□□□□ -1.6
RC3H1-206ENST00000531594 ZBTB24O43167 697 aaPredicted RBP5.07□□□□□ -1.6
RC3H1-206ENST00000531594 BMP1P13497 986 aa5.07□□□□□ -1.6
RC3H1-206ENST00000531594 GMPRP36959 345 aa5.07□□□□□ -1.6
RC3H1-206ENST00000531594 HIC1Q14526 733 aa5.07□□□□□ -1.6
RC3H1-206ENST00000531594 MSS51Q4VC12 460 aa5.07□□□□□ -1.6
RC3H1-206ENST00000531594 MMP16P51512 607 aa5.05□□□□□ -1.6
RC3H1-206ENST00000531594 RSPH4AQ5TD94 716 aa5.05□□□□□ -1.6
RC3H1-206ENST00000531594 TRIM46Q7Z4K8 759 aa5.05□□□□□ -1.6
RC3H1-206ENST00000531594 SALL2Q9Y467 1007 aaPredicted RBP5.05□□□□□ -1.6
RC3H1-206ENST00000531594 ERBB4Q15303 1308 aa5.04□□□□□ -1.6
RC3H1-206ENST00000531594 GNPATO15228 680 aa5.04□□□□□ -1.6
RC3H1-206ENST00000531594 RC3H1Q5TC82 1133 aaKnown RBP5.04□□□□□ -1.6
RC3H1-206ENST00000531594 SENP2Q9HC62 589 aa5.04□□□□□ -1.6
RC3H1-206ENST00000531594 DXOO77932 396 aaKnown RBP5.03□□□□□ -1.6
RC3H1-206ENST00000531594 ALDH1A1P00352 501 aa5.02□□□□□ -1.61
RC3H1-206ENST00000531594 GUCA2AQ02747 115 aa5.02□□□□□ -1.61
RC3H1-206ENST00000531594 CCDC24Q8N4L8 307 aa5.02□□□□□ -1.61
RC3H1-206ENST00000531594 RTN4Q9NQC3 1192 aaKnown RBP5.02□□□□□ -1.61
RC3H1-206ENST00000531594 NXF1Q9UBU9 619 aaKnown RBP5.02□□□□□ -1.61
RC3H1-206ENST00000531594 TESPA1A2RU30 521 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-206ENST00000531594 ZSCAN1Q8NBB4 408 aa5.01□□□□□ -1.61
RC3H1-206ENST00000531594 SYMPKQ92797 1274 aaKnown RBP5.01□□□□□ -1.61
RC3H1-206ENST00000531594 SIAH2O43255 324 aa5□□□□□ -1.61
RC3H1-206ENST00000531594 PTCRAQ6ISU1 281 aaPredicted RBP5□□□□□ -1.61
RC3H1-206ENST00000531594 KIFC2Q96AC6 838 aa5□□□□□ -1.61
RC3H1-206ENST00000531594 USB1Q9BQ65 265 aaKnown RBP5□□□□□ -1.61
RC3H1-206ENST00000531594 SOBPA7XYQ1 873 aa4.99□□□□□ -1.61
RC3H1-206ENST00000531594 H3BM21 787 aa4.99□□□□□ -1.61
RC3H1-206ENST00000531594 CD46P15529 392 aa4.99□□□□□ -1.61
RC3H1-206ENST00000531594 SULF1Q8IWU6 871 aa4.99□□□□□ -1.61
RC3H1-206ENST00000531594 REPIN1Q9BWE0 567 aaKnown RBP4.99□□□□□ -1.61
RC3H1-206ENST00000531594 SLC16A10Q8TF71 515 aa4.98□□□□□ -1.61
RC3H1-206ENST00000531594 CAPN5O15484 640 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-206ENST00000531594 WNT7BP56706 349 aa4.97□□□□□ -1.61
RC3H1-206ENST00000531594 Q3C1V9 767 aa4.97□□□□□ -1.61
RC3H1-206ENST00000531594 IRF7Q92985 503 aa4.97□□□□□ -1.61
RC3H1-206ENST00000531594 TLL2Q9Y6L7 1015 aa4.97□□□□□ -1.61
RC3H1-206ENST00000531594 KDM4AO75164 1064 aa4.96□□□□□ -1.62
RC3H1-206ENST00000531594 SUZ12Q15022 739 aaKnown RBP4.96□□□□□ -1.62
RC3H1-206ENST00000531594 ZFP42Q96MM3 310 aa4.96□□□□□ -1.62
RC3H1-206ENST00000531594 HOXA2O43364 376 aa4.95□□□□□ -1.62
RC3H1-206ENST00000531594 GSK3AP49840 483 aa4.95□□□□□ -1.62
RC3H1-206ENST00000531594 SH3BP2P78314 561 aa4.95□□□□□ -1.62
RC3H1-206ENST00000531594 GRIPAP1Q4V328 841 aa4.95□□□□□ -1.62
RC3H1-206ENST00000531594 P3H3Q8IVL6 736 aa4.95□□□□□ -1.62
RC3H1-206ENST00000531594 EHBP1Q8NDI1 1231 aa4.95□□□□□ -1.62
RC3H1-206ENST00000531594 FAM181BA6NEQ2 426 aa4.94□□□□□ -1.62
RC3H1-206ENST00000531594 JUNDP17535 347 aa4.94□□□□□ -1.62
RC3H1-206ENST00000531594 MDM2Q00987 491 aaPredicted RBP4.94□□□□□ -1.62
RC3H1-206ENST00000531594 LINC01559Q495D7 138 aa4.94□□□□□ -1.62
RC3H1-206ENST00000531594 NUDT12Q9BQG2 462 aa4.93□□□□□ -1.62
RC3H1-206ENST00000531594 WASF2Q9Y6W5 498 aa4.93□□□□□ -1.62
RC3H1-206ENST00000531594 AMER1Q5JTC6 1135 aaPredicted RBP4.92□□□□□ -1.62
RC3H1-206ENST00000531594 GPIHBP1Q8IV16 184 aa4.92□□□□□ -1.62
RC3H1-206ENST00000531594 NPAS3Q8IXF0 933 aa4.92□□□□□ -1.62
RC3H1-206ENST00000531594 KCTD17Q8N5Z5 321 aa4.92□□□□□ -1.62
RC3H1-206ENST00000531594 PURBQ96QR8 312 aaKnown RBP4.92□□□□□ -1.62
RC3H1-206ENST00000531594 PCDHGC3Q9UN70 934 aa4.92□□□□□ -1.62
RC3H1-206ENST00000531594 TIMP2P16035 220 aa4.9□□□□□ -1.63
RC3H1-206ENST00000531594 NNTQ13423 1086 aa4.9□□□□□ -1.63
RC3H1-206ENST00000531594 MRPL14Q6P1L8 145 aaKnown RBP4.9□□□□□ -1.63
RC3H1-206ENST00000531594 VSIG8P0DPA2 414 aa4.89□□□□□ -1.63
RC3H1-206ENST00000531594 RETREG3Q86VR2 466 aa4.89□□□□□ -1.63
RC3H1-206ENST00000531594 BAP1Q92560 729 aa4.89□□□□□ -1.63
RC3H1-206ENST00000531594 UNC93B1Q9H1C4 597 aa4.89□□□□□ -1.63
RC3H1-206ENST00000531594 WDR4P57081 412 aaKnown RBP4.88□□□□□ -1.63
RC3H1-206ENST00000531594 USP46P62068 366 aa4.88□□□□□ -1.63
RC3H1-206ENST00000531594 KRT76Q01546 638 aa4.88□□□□□ -1.63
RC3H1-206ENST00000531594 SMYD5Q6GMV2 418 aa4.88□□□□□ -1.63
RC3H1-206ENST00000531594 KLF16Q9BXK1 252 aaPredicted RBP4.88□□□□□ -1.63
RC3H1-206ENST00000531594 ZFAND3Q9H8U3 227 aa4.88□□□□□ -1.63
RC3H1-206ENST00000531594 CCNYL3P0C7X3 344 aa4.87□□□□□ -1.63
RC3H1-206ENST00000531594 MAP2K5Q13163 448 aa4.87□□□□□ -1.63
RC3H1-206ENST00000531594 C6orf229H3BNL8 230 aa4.86□□□□□ -1.63
RC3H1-206ENST00000531594 IRF6O14896 467 aa4.86□□□□□ -1.63
RC3H1-206ENST00000531594 MS4A1P11836 297 aa4.86□□□□□ -1.63
RC3H1-206ENST00000531594 NDUFV2P19404 249 aa4.86□□□□□ -1.63
RC3H1-206ENST00000531594 KCNMA1Q12791 1236 aa4.86□□□□□ -1.63
RC3H1-206ENST00000531594 C6orf118Q5T5N4 469 aa4.86□□□□□ -1.63
RC3H1-206ENST00000531594 ZNF511Q8NB15 262 aa4.86□□□□□ -1.63
RC3H1-206ENST00000531594 CCDC102AQ96A19 550 aa4.86□□□□□ -1.63
RC3H1-206ENST00000531594 FAM217BQ9NTX9 383 aaPredicted RBP4.86□□□□□ -1.63
RC3H1-206ENST00000531594 PPFIA3O75145 1194 aa4.85□□□□□ -1.63
RC3H1-206ENST00000531594 ADH1CP00326 375 aa4.85□□□□□ -1.63
RC3H1-206ENST00000531594 NR3C2P08235 984 aa4.85□□□□□ -1.63
RC3H1-206ENST00000531594 FDX1P10109 184 aa4.85□□□□□ -1.63
RC3H1-206ENST00000531594 GPR161Q8N6U8 529 aaKnown RBP4.85□□□□□ -1.63
RC3H1-206ENST00000531594 ITPKCQ96DU7 683 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms