RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 TMF1P82094 1093 aa24.67■■□□□ 1.54
CTSB-222ENST00000531551 QRICH2Q9H0J4 1663 aa24.66■■□□□ 1.54
CTSB-222ENST00000531551 POLR3GLQ9BT43 218 aa24.66■■□□□ 1.54
CTSB-222ENST00000531551 SLC24A1O60721 1099 aa24.64■■□□□ 1.53
CTSB-222ENST00000531551 SBNO2Q9Y2G9 1366 aa24.64■■□□□ 1.53
CTSB-222ENST00000531551 LRRC7Q96NW7 1537 aa24.63■■□□□ 1.53
CTSB-222ENST00000531551 EVC2Q86UK5 1308 aa24.63■■□□□ 1.53
CTSB-222ENST00000531551 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
CTSB-222ENST00000531551 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.62■■□□□ 1.53
CTSB-222ENST00000531551 DISP3Q9P2K9 1392 aa24.62■■□□□ 1.53
CTSB-222ENST00000531551 SRPK2P78362 688 aaKnown RBP24.62■■□□□ 1.53
CTSB-222ENST00000531551 C11orf95C9JLR9 678 aaPredicted RBP24.61■■□□□ 1.53
CTSB-222ENST00000531551 CDK19Q9BWU1 502 aa24.61■■□□□ 1.53
CTSB-222ENST00000531551 WASLO00401 505 aaPredicted RBP24.6■■□□□ 1.53
CTSB-222ENST00000531551 CABP2Q9NPB3 220 aa24.6■■□□□ 1.53
CTSB-222ENST00000531551 NUTM2FA1L443 756 aa24.6■■□□□ 1.53
CTSB-222ENST00000531551 ADGRL3Q9HAR2 1447 aa24.59■■□□□ 1.53
CTSB-222ENST00000531551 LTBP4Q8N2S1 1624 aa24.59■■□□□ 1.53
CTSB-222ENST00000531551 C19orf44Q9H6X5 657 aa24.59■■□□□ 1.53
CTSB-222ENST00000531551 CDCA8Q53HL2 280 aa24.57■■□□□ 1.52
CTSB-222ENST00000531551 NCOA3Q9Y6Q9 1424 aa24.57■■□□□ 1.52
CTSB-222ENST00000531551 MSH6P52701 1360 aa24.57■■□□□ 1.52
CTSB-222ENST00000531551 TULP4Q9NRJ4 1543 aa24.57■■□□□ 1.52
CTSB-222ENST00000531551 ATF3P18847 181 aa24.55■■□□□ 1.52
CTSB-222ENST00000531551 NALCNQ8IZF0 1738 aa24.55■■□□□ 1.52
CTSB-222ENST00000531551 KIF7Q2M1P5 1343 aa24.54■■□□□ 1.52
CTSB-222ENST00000531551 WASHC2AQ641Q2 1341 aa24.53■■□□□ 1.52
CTSB-222ENST00000531551 ADGRB2O60241 1585 aa24.52■■□□□ 1.52
CTSB-222ENST00000531551 CCDC7Q96M83 1385 aa24.5■■□□□ 1.51
CTSB-222ENST00000531551 CADPS2Q86UW7 1296 aa24.5■■□□□ 1.51
CTSB-222ENST00000531551 TMC1Q8TDI8 760 aa24.5■■□□□ 1.51
CTSB-222ENST00000531551 NUDT16Q96DE0 195 aaKnown RBP24.5■■□□□ 1.51
CTSB-222ENST00000531551 CDC42BPGQ6DT37 1551 aa24.49■■□□□ 1.51
CTSB-222ENST00000531551 XIRP1Q702N8 1843 aaKnown RBP24.48■■□□□ 1.51
CTSB-222ENST00000531551 PRR36Q9H6K5 1346 aa24.47■■□□□ 1.51
CTSB-222ENST00000531551 PUS7Q96PZ0 661 aaKnown RBP24.46■■□□□ 1.51
CTSB-222ENST00000531551 ATAD2Q6PL18 1390 aa24.46■■□□□ 1.51
CTSB-222ENST00000531551 DCCP43146 1447 aa24.45■■□□□ 1.5
CTSB-222ENST00000531551 CCDC61Q9Y6R9 512 aa24.45■■□□□ 1.5
CTSB-222ENST00000531551 CERKQ8TCT0 537 aa24.44■■□□□ 1.5
CTSB-222ENST00000531551 CABP1Q9NZU7 370 aa24.43■■□□□ 1.5
CTSB-222ENST00000531551 ESCO1Q5FWF5 840 aa24.43■■□□□ 1.5
CTSB-222ENST00000531551 SLC12A5Q9H2X9 1139 aa24.43■■□□□ 1.5
CTSB-222ENST00000531551 ATP7BP35670 1465 aa24.42■■□□□ 1.5
CTSB-222ENST00000531551 FMN2Q9NZ56 1722 aa24.42■■□□□ 1.5
CTSB-222ENST00000531551 PMFBP1Q8TBY8 1022 aa24.41■■□□□ 1.5
CTSB-222ENST00000531551 DDX10Q13206 875 aaKnown RBP24.41■■□□□ 1.5
CTSB-222ENST00000531551 PPIP5K1Q6PFW1 1433 aa24.4■■□□□ 1.5
CTSB-222ENST00000531551 ANKARQ7Z5J8 1434 aa24.4■■□□□ 1.5
CTSB-222ENST00000531551 ORAI2Q96SN7 254 aa24.4■■□□□ 1.5
CTSB-222ENST00000531551 SLAIN2Q9P270 581 aa24.4■■□□□ 1.5
CTSB-222ENST00000531551 MST1RQ04912 1400 aa24.4■■□□□ 1.5
CTSB-222ENST00000531551 C1orf167Q5SNV9 1468 aa24.39■■□□□ 1.49
CTSB-222ENST00000531551 USP32Q8NFA0 1604 aa24.37■■□□□ 1.49
CTSB-222ENST00000531551 PHF8Q9UPP1 1060 aa24.36■■□□□ 1.49
CTSB-222ENST00000531551 NGDNQ8NEJ9 315 aaKnown RBP24.36■■□□□ 1.49
CTSB-222ENST00000531551 UBAP1LF5GYI3 381 aa24.35■■□□□ 1.49
CTSB-222ENST00000531551 TOM1O60784 492 aa24.35■■□□□ 1.49
CTSB-222ENST00000531551 PANK3Q9H999 370 aa24.34■■□□□ 1.49
CTSB-222ENST00000531551 NINLQ9Y2I6 1382 aa24.34■■□□□ 1.49
CTSB-222ENST00000531551 PLEKHG3A1L390 1219 aa24.33■■□□□ 1.49
CTSB-222ENST00000531551 HDGFL2Q7Z4V5 671 aaPredicted RBP24.33■■□□□ 1.49
CTSB-222ENST00000531551 TERF2IPQ9NYB0 399 aa24.33■■□□□ 1.49
CTSB-222ENST00000531551 ACEP12821 1306 aa24.33■■□□□ 1.49
CTSB-222ENST00000531551 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
CTSB-222ENST00000531551 PIP4K2BP78356 416 aa24.32■■□□□ 1.48
CTSB-222ENST00000531551 RGPD8O14715 1765 aaPredicted RBP24.32■■□□□ 1.48
CTSB-222ENST00000531551 IQSEC2Q5JU85 1478 aa24.31■■□□□ 1.48
CTSB-222ENST00000531551 BRINP3Q76B58 766 aa24.3■■□□□ 1.48
CTSB-222ENST00000531551 FOXO3O43524 673 aa24.3■■□□□ 1.48
CTSB-222ENST00000531551 MYOM1P52179 1685 aa24.29■■□□□ 1.48
CTSB-222ENST00000531551 A0A1W2PP64 1363 aa24.29■■□□□ 1.48
CTSB-222ENST00000531551 TOPAZ1Q8N9V7 1692 aa24.29■■□□□ 1.48
CTSB-222ENST00000531551 ANKRD36BQ8N2N9 1353 aa24.28■■□□□ 1.48
CTSB-222ENST00000531551 ITSN1Q15811 1721 aa24.28■■□□□ 1.48
CTSB-222ENST00000531551 PSME1Q06323 249 aa24.27■■□□□ 1.48
CTSB-222ENST00000531551 DDX17Q92841 729 aaKnown RBP24.27■■□□□ 1.48
CTSB-222ENST00000531551 KTN1Q86UP2 1357 aaKnown RBP24.26■■□□□ 1.47
CTSB-222ENST00000531551 XPCQ01831 940 aaPredicted RBP24.26■■□□□ 1.47
CTSB-222ENST00000531551 ZNF692Q9BU19 519 aaPredicted RBP24.26■■□□□ 1.47
CTSB-222ENST00000531551 CD163L1Q9NR16 1453 aa24.26■■□□□ 1.47
CTSB-222ENST00000531551 POLR3AO14802 1390 aaPredicted RBP24.24■■□□□ 1.47
CTSB-222ENST00000531551 CARD14Q9BXL6 1004 aa24.24■■□□□ 1.47
CTSB-222ENST00000531551 CNGB1Q14028 1251 aaPredicted RBP24.24■■□□□ 1.47
CTSB-222ENST00000531551 CPSF1Q10570 1443 aaKnown RBP24.23■■□□□ 1.47
CTSB-222ENST00000531551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.22■■□□□ 1.47
CTSB-222ENST00000531551 KNSTRNQ9Y448 316 aa24.22■■□□□ 1.47
CTSB-222ENST00000531551 NPHP3Q7Z494 1330 aa24.22■■□□□ 1.47
CTSB-222ENST00000531551 NSD3Q9BZ95 1437 aa24.22■■□□□ 1.47
CTSB-222ENST00000531551 PAK3O75914 559 aaPredicted RBP24.21■■□□□ 1.47
CTSB-222ENST00000531551 KRT28Q7Z3Y7 464 aa24.21■■□□□ 1.47
CTSB-222ENST00000531551 KIF1AQ12756 1690 aa24.2■■□□□ 1.46
CTSB-222ENST00000531551 USP6P35125 1406 aa24.19■■□□□ 1.46
CTSB-222ENST00000531551 PER1O15534 1290 aaPredicted RBP24.17■■□□□ 1.46
CTSB-222ENST00000531551 ROBO1Q9Y6N7 1651 aa24.17■■□□□ 1.46
CTSB-222ENST00000531551 EDC4Q6P2E9 1401 aaKnown RBP24.16■■□□□ 1.46
CTSB-222ENST00000531551 TTC21BQ7Z4L5 1316 aa24.16■■□□□ 1.46
CTSB-222ENST00000531551 LMOD2Q6P5Q4 547 aa24.15■■□□□ 1.46
CTSB-222ENST00000531551 CGNL1Q0VF96 1302 aa24.14■■□□□ 1.45
CTSB-222ENST00000531551 AKAP12Q02952 1782 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms