RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.14
SNHG9-201ENST00000531523 YTHDC2Q9H6S0 1430 aaKnown RBP22.18■■□□□ 1.14
SNHG9-201ENST00000531523 SOS2Q07890 1332 aaPredicted RBP22.18■■□□□ 1.14
SNHG9-201ENST00000531523 LRRC59Q96AG4 307 aaKnown RBP22.17■■□□□ 1.14
SNHG9-201ENST00000531523 TMEM132EQ6IEE7 984 aa22.16■■□□□ 1.14
SNHG9-201ENST00000531523 PXDNQ92626 1479 aa22.15■■□□□ 1.14
SNHG9-201ENST00000531523 MEX3CQ5U5Q3 659 aaKnown RBP22.15■■□□□ 1.14
SNHG9-201ENST00000531523 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
SNHG9-201ENST00000531523 NUTM2BA6NNL0 878 aaPredicted RBP22.14■■□□□ 1.13
SNHG9-201ENST00000531523 NUTM2EB1AL46 878 aaPredicted RBP22.14■■□□□ 1.13
SNHG9-201ENST00000531523 NUTM2AQ8IVF1 878 aaPredicted RBP22.14■■□□□ 1.13
SNHG9-201ENST00000531523 ADGRB1O14514 1584 aa22.13■■□□□ 1.13
SNHG9-201ENST00000531523 STK26Q9P289 416 aa22.13■■□□□ 1.13
SNHG9-201ENST00000531523 RGPD8O14715 1765 aaPredicted RBP22.12■■□□□ 1.13
SNHG9-201ENST00000531523 ZNF772Q68DY9 489 aaPredicted RBP22.12■■□□□ 1.13
SNHG9-201ENST00000531523 C14orf93Q9H972 538 aaKnown RBP22.12■■□□□ 1.13
SNHG9-201ENST00000531523 KIF1AQ12756 1690 aa22.11■■□□□ 1.13
SNHG9-201ENST00000531523 MARF1Q9Y4F3 1742 aaKnown RBP22.1■■□□□ 1.13
SNHG9-201ENST00000531523 DLC1Q96QB1 1528 aa22.1■■□□□ 1.13
SNHG9-201ENST00000531523 AFF2P51816 1311 aa22.09■■□□□ 1.13
SNHG9-201ENST00000531523 CDK12Q9NYV4 1490 aaPredicted RBP22.09■■□□□ 1.13
SNHG9-201ENST00000531523 CFAP70Q5T0N1 1121 aa22.08■■□□□ 1.13
SNHG9-201ENST00000531523 ADGRB2O60241 1585 aa22.08■■□□□ 1.12
SNHG9-201ENST00000531523 USP32Q8NFA0 1604 aa22.07■■□□□ 1.12
SNHG9-201ENST00000531523 SIRT1Q96EB6 747 aa22.06■■□□□ 1.12
SNHG9-201ENST00000531523 ESCO1Q5FWF5 840 aa22.05■■□□□ 1.12
SNHG9-201ENST00000531523 NPHP3Q7Z494 1330 aa22.05■■□□□ 1.12
SNHG9-201ENST00000531523 HRCP23327 699 aa22.04■■□□□ 1.12
SNHG9-201ENST00000531523 DHX57Q6P158 1386 aaKnown RBP22.03■■□□□ 1.12
SNHG9-201ENST00000531523 C8orf37Q96NL8 207 aa22.03■■□□□ 1.12
SNHG9-201ENST00000531523 NUTM2FA1L443 756 aa22.02■■□□□ 1.12
SNHG9-201ENST00000531523 RGS12O14924 1447 aa22.02■■□□□ 1.12
SNHG9-201ENST00000531523 ARHGEF28Q8N1W1 1705 aaKnown RBP22■■□□□ 1.11
SNHG9-201ENST00000531523 FOXO3O43524 673 aa22■■□□□ 1.11
SNHG9-201ENST00000531523 RXRBP28702 533 aa22■■□□□ 1.11
SNHG9-201ENST00000531523 ABCA3Q99758 1704 aa22■■□□□ 1.11
SNHG9-201ENST00000531523 ADAMTS2O95450 1211 aa21.99■■□□□ 1.11
SNHG9-201ENST00000531523 XPCQ01831 940 aaPredicted RBP21.99■■□□□ 1.11
SNHG9-201ENST00000531523 PRAM1Q96QH2 718 aa21.97■■□□□ 1.11
SNHG9-201ENST00000531523 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
SNHG9-201ENST00000531523 TRPM3Q9HCF6 1732 aaPredicted RBP21.95■■□□□ 1.1
SNHG9-201ENST00000531523 ATRNO75882 1429 aa21.95■■□□□ 1.1
SNHG9-201ENST00000531523 FNBP4Q8N3X1 1017 aaPredicted RBP21.94■■□□□ 1.1
SNHG9-201ENST00000531523 QTRT2Q9H974 415 aaKnown RBP21.94■■□□□ 1.1
SNHG9-201ENST00000531523 SPATA31A3Q5VYP0 1347 aa21.94■■□□□ 1.1
SNHG9-201ENST00000531523 ANKARQ7Z5J8 1434 aa21.94■■□□□ 1.1
SNHG9-201ENST00000531523 BCL9LQ86UU0 1499 aa21.93■■□□□ 1.1
SNHG9-201ENST00000531523 UPF1Q92900 1129 aaKnown RBP eCLIP21.93■■□□□ 1.1
SNHG9-201ENST00000531523 NGLY1Q96IV0 654 aa21.93■■□□□ 1.1
SNHG9-201ENST00000531523 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
SNHG9-201ENST00000531523 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
SNHG9-201ENST00000531523 SAFB2Q14151 953 aaKnown RBP eCLIP21.92■■□□□ 1.1
SNHG9-201ENST00000531523 DCAF11Q8TEB1 546 aa21.92■■□□□ 1.1
SNHG9-201ENST00000531523 TULP4Q9NRJ4 1543 aa21.91■■□□□ 1.1
SNHG9-201ENST00000531523 TNS3Q68CZ2 1445 aa21.91■■□□□ 1.1
SNHG9-201ENST00000531523 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
SNHG9-201ENST00000531523 ALS2Q96Q42 1657 aa21.9■■□□□ 1.1
SNHG9-201ENST00000531523 USP21Q9UK80 565 aa21.89■■□□□ 1.09
SNHG9-201ENST00000531523 PHF8Q9UPP1 1060 aa21.89■■□□□ 1.09
SNHG9-201ENST00000531523 TRAK1Q9UPV9 953 aa21.89■■□□□ 1.09
SNHG9-201ENST00000531523 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
SNHG9-201ENST00000531523 STAC3Q96MF2 364 aa21.88■■□□□ 1.09
SNHG9-201ENST00000531523 SLIT2O94813 1529 aa21.88■■□□□ 1.09
SNHG9-201ENST00000531523 CRYBG1Q9Y4K1 1723 aa21.88■■□□□ 1.09
SNHG9-201ENST00000531523 PRR36Q9H6K5 1346 aa21.87■■□□□ 1.09
SNHG9-201ENST00000531523 KRT28Q7Z3Y7 464 aa21.87■■□□□ 1.09
SNHG9-201ENST00000531523 SBNO1A3KN83 1393 aa21.87■■□□□ 1.09
SNHG9-201ENST00000531523 POGKQ9P215 609 aa21.86■■□□□ 1.09
SNHG9-201ENST00000531523 GLI3P10071 1580 aa21.86■■□□□ 1.09
SNHG9-201ENST00000531523 ITSN1Q15811 1721 aa21.86■■□□□ 1.09
SNHG9-201ENST00000531523 TRPC5Q9UL62 973 aaPredicted RBP21.85■■□□□ 1.09
SNHG9-201ENST00000531523 TOPAZ1Q8N9V7 1692 aa21.85■■□□□ 1.09
SNHG9-201ENST00000531523 NWD2Q9ULI1 1742 aa21.84■■□□□ 1.09
SNHG9-201ENST00000531523 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
SNHG9-201ENST00000531523 ATP7BP35670 1465 aa21.83■■□□□ 1.09
SNHG9-201ENST00000531523 MINK1Q8N4C8 1332 aaPredicted RBP21.83■■□□□ 1.09
SNHG9-201ENST00000531523 NRAPQ86VF7 1730 aa21.81■■□□□ 1.08
SNHG9-201ENST00000531523 EIF3AQ14152 1382 aaKnown RBP21.8■■□□□ 1.08
SNHG9-201ENST00000531523 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
SNHG9-201ENST00000531523 WASLO00401 505 aaPredicted RBP21.79■■□□□ 1.08
SNHG9-201ENST00000531523 BRWD3Q6RI45 1802 aa21.78■■□□□ 1.08
SNHG9-201ENST00000531523 RALGAPBQ86X10 1494 aa21.78■■□□□ 1.08
SNHG9-201ENST00000531523 ARHGEF10O15013 1369 aa21.78■■□□□ 1.08
SNHG9-201ENST00000531523 PSME1Q06323 249 aa21.78■■□□□ 1.08
SNHG9-201ENST00000531523 CABLES1Q8TDN4 633 aa21.77■■□□□ 1.08
SNHG9-201ENST00000531523 EP400Q96L91 3159 aa21.76■■□□□ 1.07
SNHG9-201ENST00000531523 PHRF1Q9P1Y6 1649 aaKnown RBP21.74■■□□□ 1.07
SNHG9-201ENST00000531523 UNC5CLQ8IV45 518 aa21.74■■□□□ 1.07
SNHG9-201ENST00000531523 GJD4Q96KN9 370 aaPredicted RBP21.74■■□□□ 1.07
SNHG9-201ENST00000531523 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
SNHG9-201ENST00000531523 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
SNHG9-201ENST00000531523 QRICH2Q9H0J4 1663 aa21.72■■□□□ 1.07
SNHG9-201ENST00000531523 COL14A1Q05707 1796 aaKnown RBP21.72■■□□□ 1.07
SNHG9-201ENST00000531523 NBPF1Q3BBV0 1214 aa21.72■■□□□ 1.07
SNHG9-201ENST00000531523 GPRASP1Q5JY77 1395 aa21.7■■□□□ 1.06
SNHG9-201ENST00000531523 LMOD2Q6P5Q4 547 aa21.68■■□□□ 1.06
SNHG9-201ENST00000531523 NUDT16Q96DE0 195 aaKnown RBP21.68■■□□□ 1.06
SNHG9-201ENST00000531523 POLR3AO14802 1390 aaPredicted RBP21.68■■□□□ 1.06
SNHG9-201ENST00000531523 PLEKHG5O94827 1062 aa21.67■■□□□ 1.06
SNHG9-201ENST00000531523 FAM83GA6ND36 823 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms