RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
C11orf54-210ENST00000531516 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
C11orf54-210ENST00000531516 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
C11orf54-210ENST00000531516 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
C11orf54-210ENST00000531516 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
C11orf54-210ENST00000531516 ZNF772Q68DY9 489 aaPredicted RBP18.22■□□□□ 0.51
C11orf54-210ENST00000531516 ORAI2Q96SN7 254 aa18.22■□□□□ 0.51
C11orf54-210ENST00000531516 NALCNQ8IZF0 1738 aa18.22■□□□□ 0.51
C11orf54-210ENST00000531516 IFT172Q9UG01 1749 aa18.22■□□□□ 0.51
C11orf54-210ENST00000531516 LAMC1P11047 1609 aa18.22■□□□□ 0.51
C11orf54-210ENST00000531516 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
C11orf54-210ENST00000531516 CDC42BPGQ6DT37 1551 aa18.19■□□□□ 0.5
C11orf54-210ENST00000531516 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
C11orf54-210ENST00000531516 DDX17Q92841 729 aaKnown RBP18.18■□□□□ 0.5
C11orf54-210ENST00000531516 RGS17Q9UGC6 210 aaPredicted RBP18.18■□□□□ 0.5
C11orf54-210ENST00000531516 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
C11orf54-210ENST00000531516 TRAK1Q9UPV9 953 aa18.17■□□□□ 0.5
C11orf54-210ENST00000531516 SOS2Q07890 1332 aaPredicted RBP18.17■□□□□ 0.5
C11orf54-210ENST00000531516 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
C11orf54-210ENST00000531516 FOXO3O43524 673 aa18.15■□□□□ 0.5
C11orf54-210ENST00000531516 EIF3AQ14152 1382 aaKnown RBP18.15■□□□□ 0.5
C11orf54-210ENST00000531516 KNDC1Q76NI1 1749 aa18.15■□□□□ 0.5
C11orf54-210ENST00000531516 NHSL1Q5SYE7 1610 aa18.14■□□□□ 0.49
C11orf54-210ENST00000531516 SHPRHQ149N8 1683 aa18.14■□□□□ 0.49
C11orf54-210ENST00000531516 PNPLA6Q8IY17 1366 aa18.14■□□□□ 0.49
C11orf54-210ENST00000531516 PSME1Q06323 249 aa18.13■□□□□ 0.49
C11orf54-210ENST00000531516 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
C11orf54-210ENST00000531516 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
C11orf54-210ENST00000531516 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
C11orf54-210ENST00000531516 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
C11orf54-210ENST00000531516 PHF8Q9UPP1 1060 aa18.11■□□□□ 0.49
C11orf54-210ENST00000531516 LRP6O75581 1613 aa18.1■□□□□ 0.49
C11orf54-210ENST00000531516 ADAMTS2O95450 1211 aa18.1■□□□□ 0.49
C11orf54-210ENST00000531516 AFF2P51816 1311 aa18.09■□□□□ 0.49
C11orf54-210ENST00000531516 MINK1Q8N4C8 1332 aaPredicted RBP18.08■□□□□ 0.49
C11orf54-210ENST00000531516 RXRBP28702 533 aa18.08■□□□□ 0.48
C11orf54-210ENST00000531516 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.48
C11orf54-210ENST00000531516 XPCQ01831 940 aaPredicted RBP18.08■□□□□ 0.48
C11orf54-210ENST00000531516 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
C11orf54-210ENST00000531516 KRT28Q7Z3Y7 464 aa18.08■□□□□ 0.48
C11orf54-210ENST00000531516 ADGRB1O14514 1584 aa18.08■□□□□ 0.48
C11orf54-210ENST00000531516 HIRIP3Q9BW71 556 aaPredicted RBP18.07■□□□□ 0.48
C11orf54-210ENST00000531516 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
C11orf54-210ENST00000531516 WASLO00401 505 aaPredicted RBP18.06■□□□□ 0.48
C11orf54-210ENST00000531516 NEUROD1Q13562 356 aa18.06■□□□□ 0.48
C11orf54-210ENST00000531516 LMOD2Q6P5Q4 547 aa18.04■□□□□ 0.48
C11orf54-210ENST00000531516 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
C11orf54-210ENST00000531516 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
C11orf54-210ENST00000531516 QTRT2Q9H974 415 aaKnown RBP18.03■□□□□ 0.48
C11orf54-210ENST00000531516 FMN2Q9NZ56 1722 aa18.03■□□□□ 0.48
C11orf54-210ENST00000531516 SPATA31A3Q5VYP0 1347 aa18.02■□□□□ 0.48
C11orf54-210ENST00000531516 PXDNQ92626 1479 aa18.02■□□□□ 0.48
C11orf54-210ENST00000531516 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.48
C11orf54-210ENST00000531516 PMFBP1Q8TBY8 1022 aa18.02■□□□□ 0.48
C11orf54-210ENST00000531516 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
C11orf54-210ENST00000531516 USP21Q9UK80 565 aa18.02■□□□□ 0.48
C11orf54-210ENST00000531516 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
C11orf54-210ENST00000531516 ARHGEF10O15013 1369 aa18.01■□□□□ 0.47
C11orf54-210ENST00000531516 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
C11orf54-210ENST00000531516 SBNO1A3KN83 1393 aa18■□□□□ 0.47
C11orf54-210ENST00000531516 TRPC5Q9UL62 973 aaPredicted RBP17.99■□□□□ 0.47
C11orf54-210ENST00000531516 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
C11orf54-210ENST00000531516 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
C11orf54-210ENST00000531516 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
C11orf54-210ENST00000531516 CENPJQ9HC77 1338 aaPredicted RBP17.98■□□□□ 0.47
C11orf54-210ENST00000531516 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
C11orf54-210ENST00000531516 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
C11orf54-210ENST00000531516 CDK19Q9BWU1 502 aa17.97■□□□□ 0.47
C11orf54-210ENST00000531516 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
C11orf54-210ENST00000531516 PAK3O75914 559 aaPredicted RBP17.95■□□□□ 0.46
C11orf54-210ENST00000531516 SRPK2P78362 688 aaKnown RBP17.95■□□□□ 0.46
C11orf54-210ENST00000531516 CCDC61Q9Y6R9 512 aa17.95■□□□□ 0.46
C11orf54-210ENST00000531516 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
C11orf54-210ENST00000531516 CDK12Q9NYV4 1490 aaPredicted RBP17.95■□□□□ 0.46
C11orf54-210ENST00000531516 COL22A1Q8NFW1 1626 aaPredicted RBP17.94■□□□□ 0.46
C11orf54-210ENST00000531516 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
C11orf54-210ENST00000531516 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
C11orf54-210ENST00000531516 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
C11orf54-210ENST00000531516 PRR36Q9H6K5 1346 aa17.93■□□□□ 0.46
C11orf54-210ENST00000531516 UNC5CLQ8IV45 518 aa17.89■□□□□ 0.45
C11orf54-210ENST00000531516 CABLES1Q8TDN4 633 aa17.89■□□□□ 0.45
C11orf54-210ENST00000531516 EVC2Q86UK5 1308 aa17.89■□□□□ 0.45
C11orf54-210ENST00000531516 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
C11orf54-210ENST00000531516 PLEKHG3A1L390 1219 aa17.87■□□□□ 0.45
C11orf54-210ENST00000531516 ATP7BP35670 1465 aa17.87■□□□□ 0.45
C11orf54-210ENST00000531516 GJD4Q96KN9 370 aaPredicted RBP17.86■□□□□ 0.45
C11orf54-210ENST00000531516 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
C11orf54-210ENST00000531516 ACEP12821 1306 aa17.86■□□□□ 0.45
C11orf54-210ENST00000531516 USP32Q8NFA0 1604 aa17.86■□□□□ 0.45
C11orf54-210ENST00000531516 ATRNO75882 1429 aa17.85■□□□□ 0.45
C11orf54-210ENST00000531516 NBPF8Q3BBV2 869 aa17.85■□□□□ 0.45
C11orf54-210ENST00000531516 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
C11orf54-210ENST00000531516 CABP2Q9NPB3 220 aa17.85■□□□□ 0.45
C11orf54-210ENST00000531516 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
C11orf54-210ENST00000531516 BCL9LQ86UU0 1499 aa17.83■□□□□ 0.45
C11orf54-210ENST00000531516 ITSN1Q15811 1721 aa17.83■□□□□ 0.44
C11orf54-210ENST00000531516 RGS12O14924 1447 aa17.82■□□□□ 0.44
C11orf54-210ENST00000531516 POLR3AO14802 1390 aaPredicted RBP17.82■□□□□ 0.44
C11orf54-210ENST00000531516 ATAD2Q6PL18 1390 aa17.82■□□□□ 0.44
C11orf54-210ENST00000531516 ABTB2Q8N961 1025 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms