RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 ORAI2Q96SN7 254 aa14.05□□□□□ -0.16
CHMP4A-205ENST00000531158 SOS2Q07890 1332 aaPredicted RBP14.05□□□□□ -0.16
CHMP4A-205ENST00000531158 KNDC1Q76NI1 1749 aa14.04□□□□□ -0.16
CHMP4A-205ENST00000531158 PXDNQ92626 1479 aa14.04□□□□□ -0.16
CHMP4A-205ENST00000531158 RGPD8O14715 1765 aaPredicted RBP14.04□□□□□ -0.16
CHMP4A-205ENST00000531158 MYOM2P54296 1465 aa14.03□□□□□ -0.16
CHMP4A-205ENST00000531158 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.02□□□□□ -0.16
CHMP4A-205ENST00000531158 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.16
CHMP4A-205ENST00000531158 HFM1A2PYH4 1435 aa14.02□□□□□ -0.16
CHMP4A-205ENST00000531158 ADAMTS2O95450 1211 aa14.02□□□□□ -0.17
CHMP4A-205ENST00000531158 BRWD3Q6RI45 1802 aa14.01□□□□□ -0.17
CHMP4A-205ENST00000531158 USP21Q9UK80 565 aa14□□□□□ -0.17
CHMP4A-205ENST00000531158 TRPC5Q9UL62 973 aaPredicted RBP14□□□□□ -0.17
CHMP4A-205ENST00000531158 LRP5O75197 1615 aa14□□□□□ -0.17
CHMP4A-205ENST00000531158 ATRNO75882 1429 aa13.99□□□□□ -0.17
CHMP4A-205ENST00000531158 ABCA3Q99758 1704 aa13.98□□□□□ -0.17
CHMP4A-205ENST00000531158 BCL9LQ86UU0 1499 aa13.98□□□□□ -0.17
CHMP4A-205ENST00000531158 TECPR2O15040 1411 aa13.98□□□□□ -0.17
CHMP4A-205ENST00000531158 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
CHMP4A-205ENST00000531158 FNBP4Q8N3X1 1017 aaPredicted RBP13.97□□□□□ -0.17
CHMP4A-205ENST00000531158 SPATA31E1Q6ZUB1 1445 aa13.97□□□□□ -0.17
CHMP4A-205ENST00000531158 GLI3P10071 1580 aa13.96□□□□□ -0.17
CHMP4A-205ENST00000531158 RPGRIP1LQ68CZ1 1315 aa13.96□□□□□ -0.17
CHMP4A-205ENST00000531158 KIF1AQ12756 1690 aa13.96□□□□□ -0.17
CHMP4A-205ENST00000531158 YY1P25490 414 aa13.96□□□□□ -0.17
CHMP4A-205ENST00000531158 ADGRF5Q8IZF2 1346 aa13.95□□□□□ -0.18
CHMP4A-205ENST00000531158 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
CHMP4A-205ENST00000531158 DEFB132Q7Z7B7 95 aa13.95□□□□□ -0.18
CHMP4A-205ENST00000531158 PLEKHH1Q9ULM0 1364 aa13.95□□□□□ -0.18
CHMP4A-205ENST00000531158 PLCH1Q4KWH8 1693 aa13.95□□□□□ -0.18
CHMP4A-205ENST00000531158 USP32Q8NFA0 1604 aa13.94□□□□□ -0.18
CHMP4A-205ENST00000531158 PSDA5PKW4 1024 aaPredicted RBP13.93□□□□□ -0.18
CHMP4A-205ENST00000531158 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
CHMP4A-205ENST00000531158 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
CHMP4A-205ENST00000531158 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
CHMP4A-205ENST00000531158 BLMP54132 1417 aaPredicted RBP13.92□□□□□ -0.18
CHMP4A-205ENST00000531158 ESCO1Q5FWF5 840 aa13.92□□□□□ -0.18
CHMP4A-205ENST00000531158 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
CHMP4A-205ENST00000531158 HRCP23327 699 aa13.91□□□□□ -0.18
CHMP4A-205ENST00000531158 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
CHMP4A-205ENST00000531158 LRPPRCP42704 1394 aaKnown RBP13.91□□□□□ -0.18
CHMP4A-205ENST00000531158 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.18
CHMP4A-205ENST00000531158 SLIT2O94813 1529 aa13.9□□□□□ -0.18
CHMP4A-205ENST00000531158 NWD2Q9ULI1 1742 aa13.9□□□□□ -0.18
CHMP4A-205ENST00000531158 FOXO3O43524 673 aa13.9□□□□□ -0.18
CHMP4A-205ENST00000531158 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.19
CHMP4A-205ENST00000531158 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
CHMP4A-205ENST00000531158 RALGAPBQ86X10 1494 aa13.88□□□□□ -0.19
CHMP4A-205ENST00000531158 ABCC11Q96J66 1382 aa13.88□□□□□ -0.19
CHMP4A-205ENST00000531158 NRAPQ86VF7 1730 aa13.88□□□□□ -0.19
CHMP4A-205ENST00000531158 TMEM132EQ6IEE7 984 aa13.88□□□□□ -0.19
CHMP4A-205ENST00000531158 STK26Q9P289 416 aa13.88□□□□□ -0.19
CHMP4A-205ENST00000531158 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
CHMP4A-205ENST00000531158 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
CHMP4A-205ENST00000531158 TRPM3Q9HCF6 1732 aaPredicted RBP13.87□□□□□ -0.19
CHMP4A-205ENST00000531158 CRYBG1Q9Y4K1 1723 aa13.87□□□□□ -0.19
CHMP4A-205ENST00000531158 SPATA31A3Q5VYP0 1347 aa13.86□□□□□ -0.19
CHMP4A-205ENST00000531158 ANKRD30BQ9BXX2 1392 aa13.85□□□□□ -0.19
CHMP4A-205ENST00000531158 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
CHMP4A-205ENST00000531158 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
CHMP4A-205ENST00000531158 ALS2Q96Q42 1657 aa13.85□□□□□ -0.19
CHMP4A-205ENST00000531158 ADGRB2O60241 1585 aa13.83□□□□□ -0.19
CHMP4A-205ENST00000531158 TNS3Q68CZ2 1445 aa13.82□□□□□ -0.2
CHMP4A-205ENST00000531158 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
CHMP4A-205ENST00000531158 ADGRB1O14514 1584 aa13.82□□□□□ -0.2
CHMP4A-205ENST00000531158 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
CHMP4A-205ENST00000531158 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
CHMP4A-205ENST00000531158 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
CHMP4A-205ENST00000531158 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
CHMP4A-205ENST00000531158 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
CHMP4A-205ENST00000531158 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
CHMP4A-205ENST00000531158 R3HDM1Q15032 1099 aaKnown RBP13.78□□□□□ -0.2
CHMP4A-205ENST00000531158 CFAP70Q5T0N1 1121 aa13.78□□□□□ -0.2
CHMP4A-205ENST00000531158 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
CHMP4A-205ENST00000531158 BAG6P46379 1132 aa13.77□□□□□ -0.21
CHMP4A-205ENST00000531158 COL14A1Q05707 1796 aaKnown RBP13.77□□□□□ -0.21
CHMP4A-205ENST00000531158 SIRT1Q96EB6 747 aa13.77□□□□□ -0.21
CHMP4A-205ENST00000531158 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
CHMP4A-205ENST00000531158 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
CHMP4A-205ENST00000531158 SBNO1A3KN83 1393 aa13.76□□□□□ -0.21
CHMP4A-205ENST00000531158 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
CHMP4A-205ENST00000531158 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
CHMP4A-205ENST00000531158 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
CHMP4A-205ENST00000531158 VPS72Q15906 364 aa13.75□□□□□ -0.21
CHMP4A-205ENST00000531158 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
CHMP4A-205ENST00000531158 DCAF8L1A6NGE4 600 aa13.74□□□□□ -0.21
CHMP4A-205ENST00000531158 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
CHMP4A-205ENST00000531158 SAFB2Q14151 953 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHMP4A-205ENST00000531158 SEPT12Q8IYM1 358 aa13.74□□□□□ -0.21
CHMP4A-205ENST00000531158 PRAM1Q96QH2 718 aa13.74□□□□□ -0.21
CHMP4A-205ENST00000531158 PHRF1Q9P1Y6 1649 aaKnown RBP13.74□□□□□ -0.21
CHMP4A-205ENST00000531158 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
CHMP4A-205ENST00000531158 ARHGEF10O15013 1369 aa13.72□□□□□ -0.21
CHMP4A-205ENST00000531158 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
CHMP4A-205ENST00000531158 PRR36Q9H6K5 1346 aa13.72□□□□□ -0.21
CHMP4A-205ENST00000531158 FAM83GA6ND36 823 aa13.72□□□□□ -0.21
CHMP4A-205ENST00000531158 PMFBP1Q8TBY8 1022 aa13.72□□□□□ -0.21
CHMP4A-205ENST00000531158 TULP4Q9NRJ4 1543 aa13.72□□□□□ -0.21
CHMP4A-205ENST00000531158 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
CHMP4A-205ENST00000531158 EN1Q05925 392 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms