RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 USP21Q9UK80 565 aa20.04■□□□□ 0.8
HIF3A-214ENST00000531043 WAPLQ7Z5K2 1190 aa20.03■□□□□ 0.8
HIF3A-214ENST00000531043 STK26Q9P289 416 aa20.03■□□□□ 0.8
HIF3A-214ENST00000531043 COL22A1Q8NFW1 1626 aaPredicted RBP20.02■□□□□ 0.8
HIF3A-214ENST00000531043 NUTM2FA1L443 756 aa20.02■□□□□ 0.8
HIF3A-214ENST00000531043 RGL3Q3MIN7 710 aa20.02■□□□□ 0.8
HIF3A-214ENST00000531043 ESCO1Q5FWF5 840 aa20.02■□□□□ 0.8
HIF3A-214ENST00000531043 FNBP4Q8N3X1 1017 aaPredicted RBP20.02■□□□□ 0.8
HIF3A-214ENST00000531043 CDC42BPGQ6DT37 1551 aa20.01■□□□□ 0.79
HIF3A-214ENST00000531043 MYOM2P54296 1465 aa20.01■□□□□ 0.79
HIF3A-214ENST00000531043 PXDNQ92626 1479 aa20.01■□□□□ 0.79
HIF3A-214ENST00000531043 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
HIF3A-214ENST00000531043 FOXO3O43524 673 aa20■□□□□ 0.79
HIF3A-214ENST00000531043 ATRNO75882 1429 aa20■□□□□ 0.79
HIF3A-214ENST00000531043 SPATA31E1Q6ZUB1 1445 aa20■□□□□ 0.79
HIF3A-214ENST00000531043 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
HIF3A-214ENST00000531043 TRPC5Q9UL62 973 aaPredicted RBP19.99■□□□□ 0.79
HIF3A-214ENST00000531043 IFT172Q9UG01 1749 aa19.99■□□□□ 0.79
HIF3A-214ENST00000531043 SRCAPQ6ZRS2 3230 aa19.98■□□□□ 0.79
HIF3A-214ENST00000531043 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
HIF3A-214ENST00000531043 LRPPRCP42704 1394 aaKnown RBP19.96■□□□□ 0.79
HIF3A-214ENST00000531043 MARF1Q9Y4F3 1742 aaKnown RBP19.96■□□□□ 0.79
HIF3A-214ENST00000531043 EP400Q96L91 3159 aa19.96■□□□□ 0.79
HIF3A-214ENST00000531043 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
HIF3A-214ENST00000531043 BCL9LQ86UU0 1499 aa19.96■□□□□ 0.79
HIF3A-214ENST00000531043 TECPR2O15040 1411 aa19.95■□□□□ 0.78
HIF3A-214ENST00000531043 MPHOSPH9Q99550 1183 aa19.95■□□□□ 0.78
HIF3A-214ENST00000531043 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
HIF3A-214ENST00000531043 ABCC11Q96J66 1382 aa19.93■□□□□ 0.78
HIF3A-214ENST00000531043 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
HIF3A-214ENST00000531043 RGPD8O14715 1765 aaPredicted RBP19.92■□□□□ 0.78
HIF3A-214ENST00000531043 ANKRD30BQ9BXX2 1392 aa19.92■□□□□ 0.78
HIF3A-214ENST00000531043 PIK3C2GO75747 1445 aa19.92■□□□□ 0.78
HIF3A-214ENST00000531043 FMN2Q9NZ56 1722 aa19.91■□□□□ 0.78
HIF3A-214ENST00000531043 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.77
HIF3A-214ENST00000531043 SPATA31A3Q5VYP0 1347 aa19.88■□□□□ 0.77
HIF3A-214ENST00000531043 GJD4Q96KN9 370 aaPredicted RBP19.88■□□□□ 0.77
HIF3A-214ENST00000531043 GLI3P10071 1580 aa19.86■□□□□ 0.77
HIF3A-214ENST00000531043 KRT28Q7Z3Y7 464 aa19.85■□□□□ 0.77
HIF3A-214ENST00000531043 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
HIF3A-214ENST00000531043 SLIT2O94813 1529 aa19.85■□□□□ 0.77
HIF3A-214ENST00000531043 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.85■□□□□ 0.77
HIF3A-214ENST00000531043 KIF1AQ12756 1690 aa19.84■□□□□ 0.77
HIF3A-214ENST00000531043 PLEKHG5O94827 1062 aa19.84■□□□□ 0.77
HIF3A-214ENST00000531043 CFAP70Q5T0N1 1121 aa19.84■□□□□ 0.77
HIF3A-214ENST00000531043 RALGAPBQ86X10 1494 aa19.84■□□□□ 0.77
HIF3A-214ENST00000531043 BRWD3Q6RI45 1802 aa19.83■□□□□ 0.77
HIF3A-214ENST00000531043 UNC5CLQ8IV45 518 aa19.83■□□□□ 0.77
HIF3A-214ENST00000531043 CABLES1Q8TDN4 633 aa19.83■□□□□ 0.77
HIF3A-214ENST00000531043 SAFB2Q14151 953 aaKnown RBP eCLIP19.82■□□□□ 0.76
HIF3A-214ENST00000531043 USP32Q8NFA0 1604 aa19.82■□□□□ 0.76
HIF3A-214ENST00000531043 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
HIF3A-214ENST00000531043 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
HIF3A-214ENST00000531043 PHF8Q9UPP1 1060 aa19.81■□□□□ 0.76
HIF3A-214ENST00000531043 PRAM1Q96QH2 718 aa19.79■□□□□ 0.76
HIF3A-214ENST00000531043 TNS3Q68CZ2 1445 aa19.78■□□□□ 0.76
HIF3A-214ENST00000531043 ZRANB1Q9UGI0 708 aa19.78■□□□□ 0.76
HIF3A-214ENST00000531043 ABCA3Q99758 1704 aa19.77■□□□□ 0.76
HIF3A-214ENST00000531043 DHX57Q6P158 1386 aaKnown RBP19.77■□□□□ 0.76
HIF3A-214ENST00000531043 CCDC125Q86Z20 511 aa19.76■□□□□ 0.75
HIF3A-214ENST00000531043 PLCH1Q4KWH8 1693 aa19.75■□□□□ 0.75
HIF3A-214ENST00000531043 SEPT12Q8IYM1 358 aa19.75■□□□□ 0.75
HIF3A-214ENST00000531043 PMFBP1Q8TBY8 1022 aa19.75■□□□□ 0.75
HIF3A-214ENST00000531043 SBNO1A3KN83 1393 aa19.74■□□□□ 0.75
HIF3A-214ENST00000531043 HAP1P54257 671 aaPredicted RBP19.74■□□□□ 0.75
HIF3A-214ENST00000531043 LMOD2Q6P5Q4 547 aa19.74■□□□□ 0.75
HIF3A-214ENST00000531043 DEFB132Q7Z7B7 95 aa19.74■□□□□ 0.75
HIF3A-214ENST00000531043 PSME1Q06323 249 aa19.73■□□□□ 0.75
HIF3A-214ENST00000531043 FAM83GA6ND36 823 aa19.72■□□□□ 0.75
HIF3A-214ENST00000531043 VPS72Q15906 364 aa19.72■□□□□ 0.75
HIF3A-214ENST00000531043 NWD2Q9ULI1 1742 aa19.71■□□□□ 0.75
HIF3A-214ENST00000531043 ADGRB1O14514 1584 aa19.71■□□□□ 0.75
HIF3A-214ENST00000531043 BLMP54132 1417 aaPredicted RBP19.71■□□□□ 0.75
HIF3A-214ENST00000531043 HIRIP3Q9BW71 556 aaPredicted RBP19.71■□□□□ 0.75
HIF3A-214ENST00000531043 POGKQ9P215 609 aa19.71■□□□□ 0.75
HIF3A-214ENST00000531043 DLC1Q96QB1 1528 aa19.71■□□□□ 0.75
HIF3A-214ENST00000531043 TRPM3Q9HCF6 1732 aaPredicted RBP19.71■□□□□ 0.75
HIF3A-214ENST00000531043 TRAK1Q9UPV9 953 aa19.7■□□□□ 0.74
HIF3A-214ENST00000531043 CCDC9Q9Y3X0 531 aaKnown RBP19.7■□□□□ 0.74
HIF3A-214ENST00000531043 PRR36Q9H6K5 1346 aa19.7■□□□□ 0.74
HIF3A-214ENST00000531043 RAB3GAP2Q9H2M9 1393 aa19.69■□□□□ 0.74
HIF3A-214ENST00000531043 ONECUT3O60422 494 aaPredicted RBP19.68■□□□□ 0.74
HIF3A-214ENST00000531043 ADGRB2O60241 1585 aa19.68■□□□□ 0.74
HIF3A-214ENST00000531043 MINK1Q8N4C8 1332 aaPredicted RBP19.68■□□□□ 0.74
HIF3A-214ENST00000531043 ARHGEF10O15013 1369 aa19.68■□□□□ 0.74
HIF3A-214ENST00000531043 NRAPQ86VF7 1730 aa19.68■□□□□ 0.74
HIF3A-214ENST00000531043 ANKARQ7Z5J8 1434 aa19.68■□□□□ 0.74
HIF3A-214ENST00000531043 KDM2AQ9Y2K7 1162 aa19.66■□□□□ 0.74
HIF3A-214ENST00000531043 ALS2Q96Q42 1657 aa19.65■□□□□ 0.74
HIF3A-214ENST00000531043 KRT27Q7Z3Y8 459 aa19.65■□□□□ 0.74
HIF3A-214ENST00000531043 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
HIF3A-214ENST00000531043 FAM98CQ17RN3 349 aaKnown RBP19.63■□□□□ 0.73
HIF3A-214ENST00000531043 BTG4Q9NY30 223 aa19.62■□□□□ 0.73
HIF3A-214ENST00000531043 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
HIF3A-214ENST00000531043 DCAF11Q8TEB1 546 aa19.61■□□□□ 0.73
HIF3A-214ENST00000531043 CRYBG1Q9Y4K1 1723 aa19.61■□□□□ 0.73
HIF3A-214ENST00000531043 A0A0G2JS52 829 aa19.6■□□□□ 0.73
HIF3A-214ENST00000531043 WASLO00401 505 aaPredicted RBP19.6■□□□□ 0.73
HIF3A-214ENST00000531043 MYT1Q01538 1121 aa19.6■□□□□ 0.73
HIF3A-214ENST00000531043 SF3B2Q13435 895 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms