RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 FNBP4Q8N3X1 1017 aaPredicted RBP8.19□□□□□ -1.1
VPS11-204ENST00000530809 SOS2Q07890 1332 aaPredicted RBP8.19□□□□□ -1.1
VPS11-204ENST00000530809 BRWD3Q6RI45 1802 aa8.19□□□□□ -1.1
VPS11-204ENST00000530809 ROCK1Q13464 1354 aa8.19□□□□□ -1.1
VPS11-204ENST00000530809 PRAG1Q86YV5 1406 aa8.19□□□□□ -1.1
VPS11-204ENST00000530809 FAM50AQ14320 339 aaKnown RBP8.18□□□□□ -1.1
VPS11-204ENST00000530809 METP08581 1390 aa8.18□□□□□ -1.1
VPS11-204ENST00000530809 CLTCL1P53675 1640 aa8.18□□□□□ -1.1
VPS11-204ENST00000530809 DDX17Q92841 729 aaKnown RBP8.17□□□□□ -1.1
VPS11-204ENST00000530809 PCGF6Q9BYE7 350 aa8.17□□□□□ -1.1
VPS11-204ENST00000530809 MYOM2P54296 1465 aa8.17□□□□□ -1.1
VPS11-204ENST00000530809 CDC42BPGQ6DT37 1551 aa8.17□□□□□ -1.1
VPS11-204ENST00000530809 PPLO60437 1756 aa8.16□□□□□ -1.1
VPS11-204ENST00000530809 NUP155O75694 1391 aa8.16□□□□□ -1.1
VPS11-204ENST00000530809 BLMP54132 1417 aaPredicted RBP8.16□□□□□ -1.1
VPS11-204ENST00000530809 ZNF326Q5BKZ1 582 aaKnown RBP8.16□□□□□ -1.1
VPS11-204ENST00000530809 NWD2Q9ULI1 1742 aa8.16□□□□□ -1.1
VPS11-204ENST00000530809 KIF1AQ12756 1690 aa8.15□□□□□ -1.1
VPS11-204ENST00000530809 BCL9LQ86UU0 1499 aa8.15□□□□□ -1.1
VPS11-204ENST00000530809 HFM1A2PYH4 1435 aa8.15□□□□□ -1.1
VPS11-204ENST00000530809 NPHP3Q7Z494 1330 aa8.15□□□□□ -1.1
VPS11-204ENST00000530809 HRCP23327 699 aa8.15□□□□□ -1.1
VPS11-204ENST00000530809 GLI3P10071 1580 aa8.14□□□□□ -1.11
VPS11-204ENST00000530809 PXDNQ92626 1479 aa8.14□□□□□ -1.11
VPS11-204ENST00000530809 HOXD11P31277 338 aaPredicted RBP8.14□□□□□ -1.11
VPS11-204ENST00000530809 PLCH1Q4KWH8 1693 aa8.14□□□□□ -1.11
VPS11-204ENST00000530809 USP32Q8NFA0 1604 aa8.14□□□□□ -1.11
VPS11-204ENST00000530809 LRPPRCP42704 1394 aaKnown RBP8.13□□□□□ -1.11
VPS11-204ENST00000530809 KNDC1Q76NI1 1749 aa8.13□□□□□ -1.11
VPS11-204ENST00000530809 SF3B2Q13435 895 aaKnown RBP8.13□□□□□ -1.11
VPS11-204ENST00000530809 GJD4Q96KN9 370 aaPredicted RBP8.13□□□□□ -1.11
VPS11-204ENST00000530809 RGPD1P0DJD0 1748 aa8.12□□□□□ -1.11
VPS11-204ENST00000530809 VGFO15240 615 aaPredicted RBP8.12□□□□□ -1.11
VPS11-204ENST00000530809 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
VPS11-204ENST00000530809 SLIT2O94813 1529 aa8.12□□□□□ -1.11
VPS11-204ENST00000530809 RALGAPBQ86X10 1494 aa8.12□□□□□ -1.11
VPS11-204ENST00000530809 ABCA3Q99758 1704 aa8.12□□□□□ -1.11
VPS11-204ENST00000530809 FMN2Q9NZ56 1722 aa8.12□□□□□ -1.11
VPS11-204ENST00000530809 ROBO2Q9HCK4 1378 aa8.11□□□□□ -1.11
VPS11-204ENST00000530809 EP400Q96L91 3159 aa8.11□□□□□ -1.11
VPS11-204ENST00000530809 IFT172Q9UG01 1749 aa8.11□□□□□ -1.11
VPS11-204ENST00000530809 ZBTB22O15209 634 aa8.1□□□□□ -1.11
VPS11-204ENST00000530809 UNC5CLQ8IV45 518 aa8.1□□□□□ -1.11
VPS11-204ENST00000530809 RGPD8O14715 1765 aaPredicted RBP8.1□□□□□ -1.11
VPS11-204ENST00000530809 RPGRIP1LQ68CZ1 1315 aa8.09□□□□□ -1.11
VPS11-204ENST00000530809 ZEB1P37275 1124 aaPredicted RBP8.09□□□□□ -1.11
VPS11-204ENST00000530809 ESCO1Q5FWF5 840 aa8.09□□□□□ -1.11
VPS11-204ENST00000530809 CCDC144AA2RUR9 1427 aa8.09□□□□□ -1.11
VPS11-204ENST00000530809 NRAPQ86VF7 1730 aa8.08□□□□□ -1.12
VPS11-204ENST00000530809 TECPR2O15040 1411 aa8.07□□□□□ -1.12
VPS11-204ENST00000530809 NAIPQ13075 1403 aa8.07□□□□□ -1.12
VPS11-204ENST00000530809 FOXO3O43524 673 aa8.07□□□□□ -1.12
VPS11-204ENST00000530809 BAG6P46379 1132 aa8.07□□□□□ -1.12
VPS11-204ENST00000530809 FOXD4L1Q9NU39 408 aa8.07□□□□□ -1.12
VPS11-204ENST00000530809 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
VPS11-204ENST00000530809 DEFB132Q7Z7B7 95 aa8.06□□□□□ -1.12
VPS11-204ENST00000530809 SRCAPQ6ZRS2 3230 aa8.06□□□□□ -1.12
VPS11-204ENST00000530809 ADGRB2O60241 1585 aa8.05□□□□□ -1.12
VPS11-204ENST00000530809 SPATA31A3Q5VYP0 1347 aa8.05□□□□□ -1.12
VPS11-204ENST00000530809 TNS3Q68CZ2 1445 aa8.05□□□□□ -1.12
VPS11-204ENST00000530809 COL14A1Q05707 1796 aaKnown RBP8.05□□□□□ -1.12
VPS11-204ENST00000530809 ONECUT3O60422 494 aaPredicted RBP8.05□□□□□ -1.12
VPS11-204ENST00000530809 HAP1P54257 671 aaPredicted RBP8.05□□□□□ -1.12
VPS11-204ENST00000530809 VPS72Q15906 364 aa8.05□□□□□ -1.12
VPS11-204ENST00000530809 KRT27Q7Z3Y8 459 aa8.05□□□□□ -1.12
VPS11-204ENST00000530809 SEPT12Q8IYM1 358 aa8.05□□□□□ -1.12
VPS11-204ENST00000530809 XPCQ01831 940 aaPredicted RBP8.04□□□□□ -1.12
VPS11-204ENST00000530809 DISP2A7MBM2 1401 aa8.03□□□□□ -1.12
VPS11-204ENST00000530809 ARHGEF10O15013 1369 aa8.03□□□□□ -1.12
VPS11-204ENST00000530809 PSME1Q06323 249 aa8.03□□□□□ -1.12
VPS11-204ENST00000530809 CCDC9Q9Y3X0 531 aaKnown RBP8.03□□□□□ -1.12
VPS11-204ENST00000530809 RRBP1Q9P2E9 1410 aaKnown RBP8.03□□□□□ -1.12
VPS11-204ENST00000530809 RREB1Q92766 1687 aa8.02□□□□□ -1.13
VPS11-204ENST00000530809 ALS2Q96Q42 1657 aa8.02□□□□□ -1.13
VPS11-204ENST00000530809 THSD7AQ9UPZ6 1657 aa8.02□□□□□ -1.13
VPS11-204ENST00000530809 SBNO1A3KN83 1393 aa8.02□□□□□ -1.13
VPS11-204ENST00000530809 ABCC11Q96J66 1382 aa8.02□□□□□ -1.13
VPS11-204ENST00000530809 ITGAEP38570 1179 aa8.02□□□□□ -1.13
VPS11-204ENST00000530809 TRPM3Q9HCF6 1732 aaPredicted RBP8.02□□□□□ -1.13
VPS11-204ENST00000530809 CRYBG1Q9Y4K1 1723 aa8.02□□□□□ -1.13
VPS11-204ENST00000530809 NRXN1Q9ULB1 1477 aa8.01□□□□□ -1.13
VPS11-204ENST00000530809 ANKRD30BQ9BXX2 1392 aa8.01□□□□□ -1.13
VPS11-204ENST00000530809 PSDA5PKW4 1024 aaPredicted RBP8.01□□□□□ -1.13
VPS11-204ENST00000530809 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
VPS11-204ENST00000530809 A0A0G2JS52 829 aa8□□□□□ -1.13
VPS11-204ENST00000530809 NUTM2FA1L443 756 aa8□□□□□ -1.13
VPS11-204ENST00000530809 MYT1Q01538 1121 aa8□□□□□ -1.13
VPS11-204ENST00000530809 NUP188Q5SRE5 1749 aa8□□□□□ -1.13
VPS11-204ENST00000530809 PARD3Q8TEW0 1356 aa7.99□□□□□ -1.13
VPS11-204ENST00000530809 PIK3C2GO75747 1445 aa7.99□□□□□ -1.13
VPS11-204ENST00000530809 ITSN1Q15811 1721 aa7.99□□□□□ -1.13
VPS11-204ENST00000530809 SIRT1Q96EB6 747 aa7.99□□□□□ -1.13
VPS11-204ENST00000530809 YTHDC2Q9H6S0 1430 aaKnown RBP7.99□□□□□ -1.13
VPS11-204ENST00000530809 PHF8Q9UPP1 1060 aa7.99□□□□□ -1.13
VPS11-204ENST00000530809 ANKARQ7Z5J8 1434 aa7.98□□□□□ -1.13
VPS11-204ENST00000530809 WAPLQ7Z5K2 1190 aa7.98□□□□□ -1.13
VPS11-204ENST00000530809 STK26Q9P289 416 aa7.98□□□□□ -1.13
VPS11-204ENST00000530809 PLEKHH1Q9ULM0 1364 aa7.97□□□□□ -1.13
VPS11-204ENST00000530809 RGPD3A6NKT7 1758 aaPredicted RBP7.97□□□□□ -1.13
VPS11-204ENST00000530809 RGPD4Q7Z3J3 1758 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms