RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 ITGAEP38570 1179 aa16.37■□□□□ 0.21
TM9SF1-210ENST00000530563 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
TM9SF1-210ENST00000530563 GJD4Q96KN9 370 aaPredicted RBP16.35■□□□□ 0.21
TM9SF1-210ENST00000530563 HFM1A2PYH4 1435 aa16.35■□□□□ 0.21
TM9SF1-210ENST00000530563 FOXD1Q16676 465 aa16.33■□□□□ 0.2
TM9SF1-210ENST00000530563 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
TM9SF1-210ENST00000530563 ESCO1Q5FWF5 840 aa16.32■□□□□ 0.2
TM9SF1-210ENST00000530563 KIF1BO60333 1816 aa16.31■□□□□ 0.2
TM9SF1-210ENST00000530563 RPGRIP1LQ68CZ1 1315 aa16.31■□□□□ 0.2
TM9SF1-210ENST00000530563 FOXO3O43524 673 aa16.31■□□□□ 0.2
TM9SF1-210ENST00000530563 XPCQ01831 940 aaPredicted RBP16.31■□□□□ 0.2
TM9SF1-210ENST00000530563 MARF1Q9Y4F3 1742 aaKnown RBP16.31■□□□□ 0.2
TM9SF1-210ENST00000530563 CDC42BPGQ6DT37 1551 aa16.3■□□□□ 0.2
TM9SF1-210ENST00000530563 SLIT2O94813 1529 aa16.3■□□□□ 0.2
TM9SF1-210ENST00000530563 GLI3P10071 1580 aa16.3■□□□□ 0.2
TM9SF1-210ENST00000530563 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
TM9SF1-210ENST00000530563 UNC5CLQ8IV45 518 aa16.28■□□□□ 0.2
TM9SF1-210ENST00000530563 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.28■□□□□ 0.2
TM9SF1-210ENST00000530563 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
TM9SF1-210ENST00000530563 NAIPQ13075 1403 aa16.28■□□□□ 0.2
TM9SF1-210ENST00000530563 SPATA31A3Q5VYP0 1347 aa16.26■□□□□ 0.19
TM9SF1-210ENST00000530563 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
TM9SF1-210ENST00000530563 DEFB132Q7Z7B7 95 aa16.26■□□□□ 0.19
TM9SF1-210ENST00000530563 ONECUT3O60422 494 aaPredicted RBP16.25■□□□□ 0.19
TM9SF1-210ENST00000530563 TECPR2O15040 1411 aa16.25■□□□□ 0.19
TM9SF1-210ENST00000530563 PPLO60437 1756 aa16.25■□□□□ 0.19
TM9SF1-210ENST00000530563 PPARGC1BQ86YN6 1023 aaKnown RBP16.24■□□□□ 0.19
TM9SF1-210ENST00000530563 ADGRF5Q8IZF2 1346 aa16.23■□□□□ 0.19
TM9SF1-210ENST00000530563 NUTM2FA1L443 756 aa16.23■□□□□ 0.19
TM9SF1-210ENST00000530563 BRWD3Q6RI45 1802 aa16.23■□□□□ 0.19
TM9SF1-210ENST00000530563 LRPPRCP42704 1394 aaKnown RBP16.23■□□□□ 0.19
TM9SF1-210ENST00000530563 SEPT12Q8IYM1 358 aa16.22■□□□□ 0.19
TM9SF1-210ENST00000530563 PLEKHH1Q9ULM0 1364 aa16.22■□□□□ 0.19
TM9SF1-210ENST00000530563 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
TM9SF1-210ENST00000530563 VPS72Q15906 364 aa16.2■□□□□ 0.18
TM9SF1-210ENST00000530563 STK26Q9P289 416 aa16.2■□□□□ 0.18
TM9SF1-210ENST00000530563 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
TM9SF1-210ENST00000530563 KRT28Q7Z3Y7 464 aa16.19■□□□□ 0.18
TM9SF1-210ENST00000530563 LRP5O75197 1615 aa16.19■□□□□ 0.18
TM9SF1-210ENST00000530563 TMEM132EQ6IEE7 984 aa16.18■□□□□ 0.18
TM9SF1-210ENST00000530563 CCDC144AA2RUR9 1427 aa16.18■□□□□ 0.18
TM9SF1-210ENST00000530563 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-210ENST00000530563 FMN2Q9NZ56 1722 aa16.17■□□□□ 0.18
TM9SF1-210ENST00000530563 CABLES1Q8TDN4 633 aa16.17■□□□□ 0.18
TM9SF1-210ENST00000530563 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-210ENST00000530563 SPATA31E1Q6ZUB1 1445 aa16.17■□□□□ 0.18
TM9SF1-210ENST00000530563 KIF1AQ12756 1690 aa16.15■□□□□ 0.18
TM9SF1-210ENST00000530563 KRT27Q7Z3Y8 459 aa16.15■□□□□ 0.18
TM9SF1-210ENST00000530563 SIRT1Q96EB6 747 aa16.15■□□□□ 0.18
TM9SF1-210ENST00000530563 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
TM9SF1-210ENST00000530563 TNS3Q68CZ2 1445 aa16.14■□□□□ 0.17
TM9SF1-210ENST00000530563 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
TM9SF1-210ENST00000530563 HRCP23327 699 aa16.14■□□□□ 0.17
TM9SF1-210ENST00000530563 YTHDC2Q9H6S0 1430 aaKnown RBP16.13■□□□□ 0.17
TM9SF1-210ENST00000530563 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
TM9SF1-210ENST00000530563 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
TM9SF1-210ENST00000530563 NWD2Q9ULI1 1742 aa16.13■□□□□ 0.17
TM9SF1-210ENST00000530563 PIK3C2GO75747 1445 aa16.12■□□□□ 0.17
TM9SF1-210ENST00000530563 PLCH1Q4KWH8 1693 aa16.12■□□□□ 0.17
TM9SF1-210ENST00000530563 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
TM9SF1-210ENST00000530563 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
TM9SF1-210ENST00000530563 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
TM9SF1-210ENST00000530563 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
TM9SF1-210ENST00000530563 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
TM9SF1-210ENST00000530563 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
TM9SF1-210ENST00000530563 PSME1Q06323 249 aa16.1■□□□□ 0.17
TM9SF1-210ENST00000530563 ABCA3Q99758 1704 aa16.1■□□□□ 0.17
TM9SF1-210ENST00000530563 RGPD8O14715 1765 aaPredicted RBP16.1■□□□□ 0.17
TM9SF1-210ENST00000530563 BAG6P46379 1132 aa16.08■□□□□ 0.16
TM9SF1-210ENST00000530563 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
TM9SF1-210ENST00000530563 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
TM9SF1-210ENST00000530563 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
TM9SF1-210ENST00000530563 HAP1P54257 671 aaPredicted RBP16.07■□□□□ 0.16
TM9SF1-210ENST00000530563 FAM98CQ17RN3 349 aaKnown RBP16.07■□□□□ 0.16
TM9SF1-210ENST00000530563 ARHGEF10O15013 1369 aa16.07■□□□□ 0.16
TM9SF1-210ENST00000530563 NRAPQ86VF7 1730 aa16.06■□□□□ 0.16
TM9SF1-210ENST00000530563 EN1Q05925 392 aaPredicted RBP16.06■□□□□ 0.16
TM9SF1-210ENST00000530563 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
TM9SF1-210ENST00000530563 LMOD2Q6P5Q4 547 aa16.04■□□□□ 0.16
TM9SF1-210ENST00000530563 BTG4Q9NY30 223 aa16.04■□□□□ 0.16
TM9SF1-210ENST00000530563 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
TM9SF1-210ENST00000530563 R3HDM1Q15032 1099 aaKnown RBP16.03■□□□□ 0.16
TM9SF1-210ENST00000530563 CFAP70Q5T0N1 1121 aa16.03■□□□□ 0.16
TM9SF1-210ENST00000530563 PMFBP1Q8TBY8 1022 aa16.03■□□□□ 0.16
TM9SF1-210ENST00000530563 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
TM9SF1-210ENST00000530563 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.16
TM9SF1-210ENST00000530563 SPATA31A5Q5VU36 1347 aa16.02■□□□□ 0.16
TM9SF1-210ENST00000530563 SPATA31A7Q8IWB4 1347 aa16.02■□□□□ 0.16
TM9SF1-210ENST00000530563 MPHOSPH9Q99550 1183 aa16.02■□□□□ 0.16
TM9SF1-210ENST00000530563 ANKARQ7Z5J8 1434 aa16.01■□□□□ 0.15
TM9SF1-210ENST00000530563 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
TM9SF1-210ENST00000530563 ALS2Q96Q42 1657 aa16■□□□□ 0.15
TM9SF1-210ENST00000530563 THSD7AQ9UPZ6 1657 aa16■□□□□ 0.15
TM9SF1-210ENST00000530563 SAFB2Q14151 953 aaKnown RBP eCLIP16■□□□□ 0.15
TM9SF1-210ENST00000530563 RGPD1P0DJD0 1748 aa15.99■□□□□ 0.15
TM9SF1-210ENST00000530563 A0A0G2JS52 829 aa15.99■□□□□ 0.15
TM9SF1-210ENST00000530563 MYT1Q01538 1121 aa15.99■□□□□ 0.15
TM9SF1-210ENST00000530563 EZH2Q15910 746 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-210ENST00000530563 CAMKK2Q96RR4 588 aa15.99■□□□□ 0.15
TM9SF1-210ENST00000530563 COL14A1Q05707 1796 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms