RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 RBM33Q96EV2 1170 aaKnown RBP34.66■■■■□ 3.14
ME3-209ENST00000530520 NALCNQ8IZF0 1738 aa34.64■■■■□ 3.14
ME3-209ENST00000530520 SLC24A1O60721 1099 aa34.62■■■■□ 3.13
ME3-209ENST00000530520 TMF1P82094 1093 aa34.62■■■■□ 3.13
ME3-209ENST00000530520 ADGRB2O60241 1585 aa34.61■■■■□ 3.13
ME3-209ENST00000530520 TMEM94Q12767 1356 aa34.61■■■■□ 3.13
ME3-209ENST00000530520 C14orf37Q86TY3 774 aa34.61■■■■□ 3.13
ME3-209ENST00000530520 LRRC7Q96NW7 1537 aa34.61■■■■□ 3.13
ME3-209ENST00000530520 XIRP1Q702N8 1843 aaKnown RBP34.6■■■■□ 3.13
ME3-209ENST00000530520 TULP4Q9NRJ4 1543 aa34.59■■■■□ 3.13
ME3-209ENST00000530520 ZNF316A6NFI3 1004 aaPredicted RBP34.58■■■■□ 3.13
ME3-209ENST00000530520 DISP3Q9P2K9 1392 aa34.58■■■■□ 3.13
ME3-209ENST00000530520 EVC2Q86UK5 1308 aa34.58■■■■□ 3.13
ME3-209ENST00000530520 ADGRL3Q9HAR2 1447 aa34.58■■■■□ 3.13
ME3-209ENST00000530520 LTBP4Q8N2S1 1624 aa34.57■■■■□ 3.12
ME3-209ENST00000530520 NCOA3Q9Y6Q9 1424 aa34.56■■■■□ 3.12
ME3-209ENST00000530520 CDC42BPGQ6DT37 1551 aa34.52■■■■□ 3.12
ME3-209ENST00000530520 C11orf95C9JLR9 678 aaPredicted RBP34.52■■■■□ 3.12
ME3-209ENST00000530520 WASLO00401 505 aaPredicted RBP34.5■■■■□ 3.11
ME3-209ENST00000530520 CDCA8Q53HL2 280 aa34.5■■■■□ 3.11
ME3-209ENST00000530520 POLR3GLQ9BT43 218 aa34.49■■■■□ 3.11
ME3-209ENST00000530520 SRPK2P78362 688 aaKnown RBP34.49■■■■□ 3.11
ME3-209ENST00000530520 CDK19Q9BWU1 502 aa34.49■■■■□ 3.11
ME3-209ENST00000530520 KIF7Q2M1P5 1343 aa34.48■■■■□ 3.11
ME3-209ENST00000530520 MSH6P52701 1360 aa34.47■■■■□ 3.11
ME3-209ENST00000530520 FMN2Q9NZ56 1722 aa34.46■■■■□ 3.11
ME3-209ENST00000530520 C19orf44Q9H6X5 657 aa34.46■■■■□ 3.11
ME3-209ENST00000530520 CCDC7Q96M83 1385 aa34.45■■■■□ 3.11
ME3-209ENST00000530520 CABP2Q9NPB3 220 aa34.45■■■■□ 3.11
ME3-209ENST00000530520 WASHC2AQ641Q2 1341 aa34.45■■■■□ 3.1
ME3-209ENST00000530520 DCCP43146 1447 aa34.42■■■■□ 3.1
ME3-209ENST00000530520 NUTM2FA1L443 756 aa34.39■■■■□ 3.1
ME3-209ENST00000530520 ATF3P18847 181 aa34.39■■■■□ 3.1
ME3-209ENST00000530520 PUS7Q96PZ0 661 aaKnown RBP34.39■■■■□ 3.1
ME3-209ENST00000530520 ATAD2Q6PL18 1390 aa34.39■■■■□ 3.1
ME3-209ENST00000530520 RGPD8O14715 1765 aaPredicted RBP34.37■■■■□ 3.09
ME3-209ENST00000530520 USP32Q8NFA0 1604 aa34.37■■■■□ 3.09
ME3-209ENST00000530520 ATP7BP35670 1465 aa34.37■■■■□ 3.09
ME3-209ENST00000530520 MYOM1P52179 1685 aa34.35■■■■□ 3.09
ME3-209ENST00000530520 ITSN1Q15811 1721 aa34.35■■■■□ 3.09
ME3-209ENST00000530520 CADPS2Q86UW7 1296 aa34.35■■■■□ 3.09
ME3-209ENST00000530520 ANKARQ7Z5J8 1434 aa34.35■■■■□ 3.09
ME3-209ENST00000530520 NUDT16Q96DE0 195 aaKnown RBP34.34■■■■□ 3.09
ME3-209ENST00000530520 PRR36Q9H6K5 1346 aa34.33■■■■□ 3.09
ME3-209ENST00000530520 TOPAZ1Q8N9V7 1692 aa34.33■■■■□ 3.09
ME3-209ENST00000530520 TMC1Q8TDI8 760 aa34.3■■■■□ 3.08
ME3-209ENST00000530520 CCDC61Q9Y6R9 512 aa34.28■■■■□ 3.08
ME3-209ENST00000530520 MST1RQ04912 1400 aa34.28■■■■□ 3.08
ME3-209ENST00000530520 PPIP5K1Q6PFW1 1433 aa34.27■■■■□ 3.08
ME3-209ENST00000530520 NINLQ9Y2I6 1382 aa34.26■■■■□ 3.07
ME3-209ENST00000530520 C1orf167Q5SNV9 1468 aa34.25■■■■□ 3.07
ME3-209ENST00000530520 SLC12A5Q9H2X9 1139 aa34.23■■■■□ 3.07
ME3-209ENST00000530520 CABP1Q9NZU7 370 aa34.23■■■■□ 3.07
ME3-209ENST00000530520 IQSEC2Q5JU85 1478 aa34.23■■■■□ 3.07
ME3-209ENST00000530520 DDX10Q13206 875 aaKnown RBP34.21■■■■□ 3.07
ME3-209ENST00000530520 ESCO1Q5FWF5 840 aa34.2■■■■□ 3.07
ME3-209ENST00000530520 CERKQ8TCT0 537 aa34.2■■■■□ 3.07
ME3-209ENST00000530520 SLAIN2Q9P270 581 aa34.18■■■■□ 3.06
ME3-209ENST00000530520 KIF1AQ12756 1690 aa34.16■■■■□ 3.06
ME3-209ENST00000530520 PMFBP1Q8TBY8 1022 aa34.16■■■■□ 3.06
ME3-209ENST00000530520 ORAI2Q96SN7 254 aa34.15■■■■□ 3.06
ME3-209ENST00000530520 PHF8Q9UPP1 1060 aa34.15■■■■□ 3.06
ME3-209ENST00000530520 PLEKHG3A1L390 1219 aa34.15■■■■□ 3.06
ME3-209ENST00000530520 AKAP12Q02952 1782 aa34.15■■■■□ 3.06
ME3-209ENST00000530520 ANKRD36BQ8N2N9 1353 aa34.14■■■■□ 3.06
ME3-209ENST00000530520 PANK3Q9H999 370 aa34.14■■■■□ 3.06
ME3-209ENST00000530520 TERF2IPQ9NYB0 399 aa34.14■■■■□ 3.06
ME3-209ENST00000530520 CD163L1Q9NR16 1453 aa34.13■■■■□ 3.05
ME3-209ENST00000530520 HDGFL2Q7Z4V5 671 aaPredicted RBP34.12■■■■□ 3.05
ME3-209ENST00000530520 A0A1W2PP64 1363 aa34.12■■■■□ 3.05
ME3-209ENST00000530520 NGDNQ8NEJ9 315 aaKnown RBP34.11■■■■□ 3.05
ME3-209ENST00000530520 ACEP12821 1306 aa34.11■■■■□ 3.05
ME3-209ENST00000530520 TOM1O60784 492 aa34.09■■■■□ 3.05
ME3-209ENST00000530520 POLR3AO14802 1390 aaPredicted RBP34.09■■■■□ 3.05
ME3-209ENST00000530520 MON2Q7Z3U7 1717 aa34.08■■■■□ 3.05
ME3-209ENST00000530520 CPSF1Q10570 1443 aaKnown RBP34.08■■■■□ 3.05
ME3-209ENST00000530520 KTN1Q86UP2 1357 aaKnown RBP34.06■■■■□ 3.04
ME3-209ENST00000530520 UBAP1LF5GYI3 381 aa34.06■■■■□ 3.04
ME3-209ENST00000530520 BRINP3Q76B58 766 aa34.06■■■■□ 3.04
ME3-209ENST00000530520 ZNF692Q9BU19 519 aaPredicted RBP34.04■■■■□ 3.04
ME3-209ENST00000530520 ROBO1Q9Y6N7 1651 aa34.04■■■■□ 3.04
ME3-209ENST00000530520 FOXO3O43524 673 aa34.02■■■■□ 3.04
ME3-209ENST00000530520 NSD3Q9BZ95 1437 aa34.02■■■■□ 3.04
ME3-209ENST00000530520 CARD14Q9BXL6 1004 aa34.01■■■■□ 3.03
ME3-209ENST00000530520 USP6P35125 1406 aa34.01■■■■□ 3.03
ME3-209ENST00000530520 NRKQ7Z2Y5 1582 aa33.99■■■■□ 3.03
ME3-209ENST00000530520 PSME1Q06323 249 aa33.98■■■■□ 3.03
ME3-209ENST00000530520 EDC4Q6P2E9 1401 aaKnown RBP33.98■■■■□ 3.03
ME3-209ENST00000530520 KNSTRNQ9Y448 316 aa33.98■■■■□ 3.03
ME3-209ENST00000530520 NPHP3Q7Z494 1330 aa33.97■■■■□ 3.03
ME3-209ENST00000530520 PIP4K2BP78356 416 aa33.97■■■■□ 3.03
ME3-209ENST00000530520 SCAF1Q9H7N4 1312 aaKnown RBP33.96■■■■□ 3.03
ME3-209ENST00000530520 NHSL1Q5SYE7 1610 aa33.96■■■■□ 3.03
ME3-209ENST00000530520 PER1O15534 1290 aaPredicted RBP33.94■■■■□ 3.02
ME3-209ENST00000530520 DDX17Q92841 729 aaKnown RBP33.94■■■■□ 3.02
ME3-209ENST00000530520 XPCQ01831 940 aaPredicted RBP33.94■■■■□ 3.02
ME3-209ENST00000530520 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.92■■■■□ 3.02
ME3-209ENST00000530520 KIF20BQ96Q89 1820 aa33.92■■■■□ 3.02
ME3-209ENST00000530520 KRT28Q7Z3Y7 464 aa33.91■■■■□ 3.02
ME3-209ENST00000530520 TRPM3Q9HCF6 1732 aaPredicted RBP33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms