RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
SYVN1-212ENST00000530451 CDC42BPGQ6DT37 1551 aa28.42■■■□□ 2.14
SYVN1-212ENST00000530451 LRPPRCP42704 1394 aaKnown RBP28.42■■■□□ 2.14
SYVN1-212ENST00000530451 PLEKHH1Q9ULM0 1364 aa28.4■■■□□ 2.14
SYVN1-212ENST00000530451 NUTM2FA1L443 756 aa28.4■■■□□ 2.14
SYVN1-212ENST00000530451 AFF2P51816 1311 aa28.4■■■□□ 2.14
SYVN1-212ENST00000530451 TECPR2O15040 1411 aa28.39■■■□□ 2.14
SYVN1-212ENST00000530451 ESCO1Q5FWF5 840 aa28.39■■■□□ 2.14
SYVN1-212ENST00000530451 C8orf37Q96NL8 207 aa28.38■■■□□ 2.13
SYVN1-212ENST00000530451 ABCC11Q96J66 1382 aa28.37■■■□□ 2.13
SYVN1-212ENST00000530451 YTHDC2Q9H6S0 1430 aaKnown RBP28.37■■■□□ 2.13
SYVN1-212ENST00000530451 SOS2Q07890 1332 aaPredicted RBP28.37■■■□□ 2.13
SYVN1-212ENST00000530451 RGPD8O14715 1765 aaPredicted RBP28.36■■■□□ 2.13
SYVN1-212ENST00000530451 ADAMTS2O95450 1211 aa28.35■■■□□ 2.13
SYVN1-212ENST00000530451 CFAP70Q5T0N1 1121 aa28.35■■■□□ 2.13
SYVN1-212ENST00000530451 FMN2Q9NZ56 1722 aa28.35■■■□□ 2.13
SYVN1-212ENST00000530451 RXRBP28702 533 aa28.33■■■□□ 2.13
SYVN1-212ENST00000530451 C14orf93Q9H972 538 aaKnown RBP28.33■■■□□ 2.13
SYVN1-212ENST00000530451 MYOM2P54296 1465 aa28.33■■■□□ 2.13
SYVN1-212ENST00000530451 XPCQ01831 940 aaPredicted RBP28.32■■■□□ 2.12
SYVN1-212ENST00000530451 NRXN1Q9ULB1 1477 aa28.32■■■□□ 2.12
SYVN1-212ENST00000530451 FOXO3O43524 673 aa28.3■■■□□ 2.12
SYVN1-212ENST00000530451 NPHP3Q7Z494 1330 aa28.28■■■□□ 2.12
SYVN1-212ENST00000530451 NGLY1Q96IV0 654 aa28.28■■■□□ 2.12
SYVN1-212ENST00000530451 COL22A1Q8NFW1 1626 aaPredicted RBP28.28■■■□□ 2.12
SYVN1-212ENST00000530451 DHX57Q6P158 1386 aaKnown RBP28.27■■■□□ 2.12
SYVN1-212ENST00000530451 PXDNQ92626 1479 aa28.27■■■□□ 2.12
SYVN1-212ENST00000530451 SAFB2Q14151 953 aaKnown RBP eCLIP28.26■■■□□ 2.11
SYVN1-212ENST00000530451 QTRT2Q9H974 415 aaKnown RBP28.25■■■□□ 2.11
SYVN1-212ENST00000530451 KDM2AQ9Y2K7 1162 aa28.24■■■□□ 2.11
SYVN1-212ENST00000530451 MARF1Q9Y4F3 1742 aaKnown RBP28.23■■■□□ 2.11
SYVN1-212ENST00000530451 KIF1AQ12756 1690 aa28.23■■■□□ 2.11
SYVN1-212ENST00000530451 SIRT1Q96EB6 747 aa28.22■■■□□ 2.11
SYVN1-212ENST00000530451 PRAM1Q96QH2 718 aa28.21■■■□□ 2.11
SYVN1-212ENST00000530451 DCAF11Q8TEB1 546 aa28.2■■■□□ 2.1
SYVN1-212ENST00000530451 CDK12Q9NYV4 1490 aaPredicted RBP28.19■■■□□ 2.1
SYVN1-212ENST00000530451 RBM6P78332 1123 aaKnown RBP28.18■■■□□ 2.1
SYVN1-212ENST00000530451 POGKQ9P215 609 aa28.18■■■□□ 2.1
SYVN1-212ENST00000530451 UPF1Q92900 1129 aaKnown RBP eCLIP28.17■■■□□ 2.12e-13■■■■■ 51.1
SYVN1-212ENST00000530451 USP21Q9UK80 565 aa28.17■■■□□ 2.1
SYVN1-212ENST00000530451 RGS12O14924 1447 aa28.16■■■□□ 2.1
SYVN1-212ENST00000530451 ADGRB1O14514 1584 aa28.16■■■□□ 2.1
SYVN1-212ENST00000530451 DLC1Q96QB1 1528 aa28.15■■■□□ 2.1
SYVN1-212ENST00000530451 TRAK1Q9UPV9 953 aa28.15■■■□□ 2.1
SYVN1-212ENST00000530451 HRCP23327 699 aa28.14■■■□□ 2.1
SYVN1-212ENST00000530451 KRT28Q7Z3Y7 464 aa28.13■■■□□ 2.09
SYVN1-212ENST00000530451 PHF8Q9UPP1 1060 aa28.13■■■□□ 2.09
SYVN1-212ENST00000530451 USP32Q8NFA0 1604 aa28.12■■■□□ 2.09
SYVN1-212ENST00000530451 PLEKHG5O94827 1062 aa28.1■■■□□ 2.09
SYVN1-212ENST00000530451 FNBP4Q8N3X1 1017 aaPredicted RBP28.1■■■□□ 2.09
SYVN1-212ENST00000530451 HIRIP3Q9BW71 556 aaPredicted RBP28.1■■■□□ 2.09
SYVN1-212ENST00000530451 SPATA31A3Q5VYP0 1347 aa28.1■■■□□ 2.09
SYVN1-212ENST00000530451 TRPC5Q9UL62 973 aaPredicted RBP28.09■■■□□ 2.09
SYVN1-212ENST00000530451 MINK1Q8N4C8 1332 aaPredicted RBP28.08■■■□□ 2.09
SYVN1-212ENST00000530451 ADGRB2O60241 1585 aa28.07■■■□□ 2.08
SYVN1-212ENST00000530451 PMFBP1Q8TBY8 1022 aa28.06■■■□□ 2.08
SYVN1-212ENST00000530451 ATRNO75882 1429 aa28.05■■■□□ 2.08
SYVN1-212ENST00000530451 ARHGEF28Q8N1W1 1705 aaKnown RBP28.05■■■□□ 2.08
SYVN1-212ENST00000530451 PSME1Q06323 249 aa28.04■■■□□ 2.08
SYVN1-212ENST00000530451 LMOD2Q6P5Q4 547 aa28.04■■■□□ 2.08
SYVN1-212ENST00000530451 BCL9LQ86UU0 1499 aa28.03■■■□□ 2.08
SYVN1-212ENST00000530451 TNS3Q68CZ2 1445 aa28.02■■■□□ 2.08
SYVN1-212ENST00000530451 CABLES1Q8TDN4 633 aa28.02■■■□□ 2.08
SYVN1-212ENST00000530451 ANKARQ7Z5J8 1434 aa28.01■■■□□ 2.08
SYVN1-212ENST00000530451 ABCA3Q99758 1704 aa28.01■■■□□ 2.07
SYVN1-212ENST00000530451 HAP1P54257 671 aaPredicted RBP28.01■■■□□ 2.07
SYVN1-212ENST00000530451 STAC3Q96MF2 364 aa28.01■■■□□ 2.07
SYVN1-212ENST00000530451 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.01■■■□□ 2.07
SYVN1-212ENST00000530451 PRR36Q9H6K5 1346 aa27.97■■■□□ 2.07
SYVN1-212ENST00000530451 TRPM3Q9HCF6 1732 aaPredicted RBP27.97■■■□□ 2.07
SYVN1-212ENST00000530451 WASLO00401 505 aaPredicted RBP27.96■■■□□ 2.07
SYVN1-212ENST00000530451 PLCH1Q4KWH8 1693 aa27.96■■■□□ 2.07
SYVN1-212ENST00000530451 TULP4Q9NRJ4 1543 aa27.96■■■□□ 2.07
SYVN1-212ENST00000530451 SBNO1A3KN83 1393 aa27.96■■■□□ 2.07
SYVN1-212ENST00000530451 SLIT2O94813 1529 aa27.93■■■□□ 2.06
SYVN1-212ENST00000530451 KIAA1210Q9ULL0 1709 aa27.93■■■□□ 2.06
SYVN1-212ENST00000530451 UNC5CLQ8IV45 518 aa27.93■■■□□ 2.06
SYVN1-212ENST00000530451 GJD4Q96KN9 370 aaPredicted RBP27.93■■■□□ 2.06
SYVN1-212ENST00000530451 ITSN1Q15811 1721 aa27.92■■■□□ 2.06
SYVN1-212ENST00000530451 ARHGEF10O15013 1369 aa27.92■■■□□ 2.06
SYVN1-212ENST00000530451 EIF3AQ14152 1382 aaKnown RBP27.92■■■□□ 2.06
SYVN1-212ENST00000530451 ALS2Q96Q42 1657 aa27.91■■■□□ 2.06
SYVN1-212ENST00000530451 ATAD2Q6PL18 1390 aa27.91■■■□□ 2.06
SYVN1-212ENST00000530451 GLI3P10071 1580 aa27.9■■■□□ 2.06
SYVN1-212ENST00000530451 BRWD3Q6RI45 1802 aa27.9■■■□□ 2.06
SYVN1-212ENST00000530451 GPRASP1Q5JY77 1395 aa27.89■■■□□ 2.06
SYVN1-212ENST00000530451 NWD2Q9ULI1 1742 aa27.89■■■□□ 2.05
SYVN1-212ENST00000530451 NGDNQ8NEJ9 315 aaKnown RBP27.88■■■□□ 2.05
SYVN1-212ENST00000530451 RALGAPBQ86X10 1494 aa27.88■■■□□ 2.05
SYVN1-212ENST00000530451 NBPF1Q3BBV0 1214 aa27.86■■■□□ 2.05
SYVN1-212ENST00000530451 PAK3O75914 559 aaPredicted RBP27.84■■■□□ 2.05
SYVN1-212ENST00000530451 NUDT16Q96DE0 195 aaKnown RBP27.84■■■□□ 2.05
SYVN1-212ENST00000530451 ATP7BP35670 1465 aa27.83■■■□□ 2.05
SYVN1-212ENST00000530451 CDK19Q9BWU1 502 aa27.83■■■□□ 2.05
SYVN1-212ENST00000530451 CCDC9Q9Y3X0 531 aaKnown RBP27.83■■■□□ 2.05
SYVN1-212ENST00000530451 CRYBG1Q9Y4K1 1723 aa27.82■■■□□ 2.04
SYVN1-212ENST00000530451 FAM83GA6ND36 823 aa27.82■■■□□ 2.04
SYVN1-212ENST00000530451 EP400Q96L91 3159 aa27.8■■■□□ 2.04
SYVN1-212ENST00000530451 TOPAZ1Q8N9V7 1692 aa27.8■■■□□ 2.04
SYVN1-212ENST00000530451 NRAPQ86VF7 1730 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms