RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PNPLA6Q8IY17 1366 aa30.91■■■□□ 2.54
SMPD1-204ENST00000530395 ORAI2Q96SN7 254 aa30.9■■■□□ 2.54
SMPD1-204ENST00000530395 ABCC11Q96J66 1382 aa30.88■■■□□ 2.53
SMPD1-204ENST00000530395 MYOM2P54296 1465 aa30.87■■■□□ 2.53
SMPD1-204ENST00000530395 YTHDC2Q9H6S0 1430 aaKnown RBP30.85■■■□□ 2.53
SMPD1-204ENST00000530395 SOS2Q07890 1332 aaPredicted RBP30.85■■■□□ 2.53
SMPD1-204ENST00000530395 TMEM132EQ6IEE7 984 aa30.85■■■□□ 2.53
SMPD1-204ENST00000530395 NRXN1Q9ULB1 1477 aa30.83■■■□□ 2.53
SMPD1-204ENST00000530395 AFF2P51816 1311 aa30.82■■■□□ 2.52
SMPD1-204ENST00000530395 WAPLQ7Z5K2 1190 aa30.82■■■□□ 2.52
SMPD1-204ENST00000530395 ESCO1Q5FWF5 840 aa30.81■■■□□ 2.52
SMPD1-204ENST00000530395 NPHP3Q7Z494 1330 aa30.79■■■□□ 2.52
SMPD1-204ENST00000530395 FMN2Q9NZ56 1722 aa30.79■■■□□ 2.52
SMPD1-204ENST00000530395 C8orf37Q96NL8 207 aa30.79■■■□□ 2.52
SMPD1-204ENST00000530395 C14orf93Q9H972 538 aaKnown RBP30.79■■■□□ 2.52
SMPD1-204ENST00000530395 RXRBP28702 533 aa30.78■■■□□ 2.52
SMPD1-204ENST00000530395 PLEKHH1Q9ULM0 1364 aa30.78■■■□□ 2.52
SMPD1-204ENST00000530395 COL22A1Q8NFW1 1626 aaPredicted RBP30.77■■■□□ 2.52
SMPD1-204ENST00000530395 DHX57Q6P158 1386 aaKnown RBP30.76■■■□□ 2.51
SMPD1-204ENST00000530395 SIRT1Q96EB6 747 aa30.74■■■□□ 2.51
SMPD1-204ENST00000530395 CDK12Q9NYV4 1490 aaPredicted RBP30.74■■■□□ 2.51
SMPD1-204ENST00000530395 KIF1AQ12756 1690 aa30.74■■■□□ 2.51
SMPD1-204ENST00000530395 CFAP70Q5T0N1 1121 aa30.73■■■□□ 2.51
SMPD1-204ENST00000530395 PXDNQ92626 1479 aa30.73■■■□□ 2.51
SMPD1-204ENST00000530395 NUTM2FA1L443 756 aa30.72■■■□□ 2.51
SMPD1-204ENST00000530395 ADAMTS2O95450 1211 aa30.72■■■□□ 2.51
SMPD1-204ENST00000530395 HRCP23327 699 aa30.7■■■□□ 2.51
SMPD1-204ENST00000530395 NGLY1Q96IV0 654 aa30.7■■■□□ 2.51
SMPD1-204ENST00000530395 FOXO3O43524 673 aa30.69■■■□□ 2.5
SMPD1-204ENST00000530395 DLC1Q96QB1 1528 aa30.67■■■□□ 2.5
SMPD1-204ENST00000530395 RGPD8O14715 1765 aaPredicted RBP30.65■■■□□ 2.5
SMPD1-204ENST00000530395 QTRT2Q9H974 415 aaKnown RBP30.65■■■□□ 2.5
SMPD1-204ENST00000530395 MARF1Q9Y4F3 1742 aaKnown RBP30.64■■■□□ 2.5
SMPD1-204ENST00000530395 XPCQ01831 940 aaPredicted RBP30.64■■■□□ 2.5
SMPD1-204ENST00000530395 RBM6P78332 1123 aaKnown RBP30.63■■■□□ 2.49
SMPD1-204ENST00000530395 PRAM1Q96QH2 718 aa30.63■■■□□ 2.49
SMPD1-204ENST00000530395 ADGRB1O14514 1584 aa30.62■■■□□ 2.49
SMPD1-204ENST00000530395 POGKQ9P215 609 aa30.61■■■□□ 2.49
SMPD1-204ENST00000530395 DCAF11Q8TEB1 546 aa30.6■■■□□ 2.49
SMPD1-204ENST00000530395 STAC3Q96MF2 364 aa30.6■■■□□ 2.49
SMPD1-204ENST00000530395 SAFB2Q14151 953 aaKnown RBP eCLIP30.59■■■□□ 2.49
SMPD1-204ENST00000530395 USP21Q9UK80 565 aa30.59■■■□□ 2.49
SMPD1-204ENST00000530395 ADGRB2O60241 1585 aa30.58■■■□□ 2.49
SMPD1-204ENST00000530395 RGS12O14924 1447 aa30.58■■■□□ 2.49
SMPD1-204ENST00000530395 KDM2AQ9Y2K7 1162 aa30.58■■■□□ 2.49
SMPD1-204ENST00000530395 FNBP4Q8N3X1 1017 aaPredicted RBP30.56■■■□□ 2.48
SMPD1-204ENST00000530395 UPF1Q92900 1129 aaKnown RBP eCLIP30.56■■■□□ 2.48
SMPD1-204ENST00000530395 TRPC5Q9UL62 973 aaPredicted RBP30.55■■■□□ 2.48
SMPD1-204ENST00000530395 PHF8Q9UPP1 1060 aa30.55■■■□□ 2.48
SMPD1-204ENST00000530395 SPATA31A3Q5VYP0 1347 aa30.54■■■□□ 2.48
SMPD1-204ENST00000530395 KRT28Q7Z3Y7 464 aa30.54■■■□□ 2.48
SMPD1-204ENST00000530395 ANKARQ7Z5J8 1434 aa30.53■■■□□ 2.48
SMPD1-204ENST00000530395 TRAK1Q9UPV9 953 aa30.52■■■□□ 2.48
SMPD1-204ENST00000530395 PSME1Q06323 249 aa30.51■■■□□ 2.47
SMPD1-204ENST00000530395 USP32Q8NFA0 1604 aa30.51■■■□□ 2.47
SMPD1-204ENST00000530395 TNS3Q68CZ2 1445 aa30.5■■■□□ 2.47
SMPD1-204ENST00000530395 ATRNO75882 1429 aa30.49■■■□□ 2.47
SMPD1-204ENST00000530395 EIF3AQ14152 1382 aaKnown RBP30.49■■■□□ 2.47
SMPD1-204ENST00000530395 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.47■■■□□ 2.47
SMPD1-204ENST00000530395 ARHGEF28Q8N1W1 1705 aaKnown RBP30.45■■■□□ 2.47
SMPD1-204ENST00000530395 SBNO1A3KN83 1393 aa30.45■■■□□ 2.47
SMPD1-204ENST00000530395 BCL9LQ86UU0 1499 aa30.44■■■□□ 2.46
SMPD1-204ENST00000530395 HIRIP3Q9BW71 556 aaPredicted RBP30.44■■■□□ 2.46
SMPD1-204ENST00000530395 MINK1Q8N4C8 1332 aaPredicted RBP30.44■■■□□ 2.46
SMPD1-204ENST00000530395 TULP4Q9NRJ4 1543 aa30.42■■■□□ 2.46
SMPD1-204ENST00000530395 HAP1P54257 671 aaPredicted RBP30.42■■■□□ 2.46
SMPD1-204ENST00000530395 ARHGEF10O15013 1369 aa30.41■■■□□ 2.46
SMPD1-204ENST00000530395 PMFBP1Q8TBY8 1022 aa30.41■■■□□ 2.46
SMPD1-204ENST00000530395 ABCA3Q99758 1704 aa30.41■■■□□ 2.46
SMPD1-204ENST00000530395 KIAA1210Q9ULL0 1709 aa30.41■■■□□ 2.46
SMPD1-204ENST00000530395 LMOD2Q6P5Q4 547 aa30.39■■■□□ 2.46
SMPD1-204ENST00000530395 ATAD2Q6PL18 1390 aa30.39■■■□□ 2.45
SMPD1-204ENST00000530395 SLIT2O94813 1529 aa30.38■■■□□ 2.45
SMPD1-204ENST00000530395 WASLO00401 505 aaPredicted RBP30.38■■■□□ 2.45
SMPD1-204ENST00000530395 ITSN1Q15811 1721 aa30.38■■■□□ 2.45
SMPD1-204ENST00000530395 TRPM3Q9HCF6 1732 aaPredicted RBP30.37■■■□□ 2.45
SMPD1-204ENST00000530395 UNC5CLQ8IV45 518 aa30.35■■■□□ 2.45
SMPD1-204ENST00000530395 GPRASP1Q5JY77 1395 aa30.35■■■□□ 2.45
SMPD1-204ENST00000530395 PLCH1Q4KWH8 1693 aa30.34■■■□□ 2.45
SMPD1-204ENST00000530395 GJD4Q96KN9 370 aaPredicted RBP30.34■■■□□ 2.45
SMPD1-204ENST00000530395 NWD2Q9ULI1 1742 aa30.33■■■□□ 2.45
SMPD1-204ENST00000530395 PRR36Q9H6K5 1346 aa30.33■■■□□ 2.45
SMPD1-204ENST00000530395 CABLES1Q8TDN4 633 aa30.33■■■□□ 2.45
SMPD1-204ENST00000530395 PLEKHG5O94827 1062 aa30.32■■■□□ 2.44
SMPD1-204ENST00000530395 ALS2Q96Q42 1657 aa30.32■■■□□ 2.44
SMPD1-204ENST00000530395 EP400Q96L91 3159 aa30.31■■■□□ 2.44
SMPD1-204ENST00000530395 RALGAPBQ86X10 1494 aa30.29■■■□□ 2.44
SMPD1-204ENST00000530395 GLI3P10071 1580 aa30.28■■■□□ 2.44
SMPD1-204ENST00000530395 NGDNQ8NEJ9 315 aaKnown RBP30.28■■■□□ 2.44
SMPD1-204ENST00000530395 ATP7BP35670 1465 aa30.27■■■□□ 2.44
SMPD1-204ENST00000530395 NUDT16Q96DE0 195 aaKnown RBP30.23■■■□□ 2.43
SMPD1-204ENST00000530395 TOPAZ1Q8N9V7 1692 aa30.22■■■□□ 2.43
SMPD1-204ENST00000530395 VPS72Q15906 364 aa30.21■■■□□ 2.43
SMPD1-204ENST00000530395 COL14A1Q05707 1796 aaKnown RBP30.2■■■□□ 2.43
SMPD1-204ENST00000530395 CRYBG1Q9Y4K1 1723 aa30.2■■■□□ 2.43
SMPD1-204ENST00000530395 PAK3O75914 559 aaPredicted RBP30.2■■■□□ 2.43
SMPD1-204ENST00000530395 CDK19Q9BWU1 502 aa30.2■■■□□ 2.43
SMPD1-204ENST00000530395 NRAPQ86VF7 1730 aa30.19■■■□□ 2.42
SMPD1-204ENST00000530395 BRWD3Q6RI45 1802 aa30.18■■■□□ 2.42
SMPD1-204ENST00000530395 NBPF1Q3BBV0 1214 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms