RNA–Protein interactions for RNA: ENST00000530330.1

SNX19-208, Transcript of sorting nexin 19, humanhuman

TSL 1 (best)

Gene SNX19, Length 880 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-208ENST00000530330 TMEM88BA6NKF7 163 aa9.1□□□□□ -0.95
SNX19-208ENST00000530330 PPP1R3GB7ZBB8 358 aa9.1□□□□□ -0.95
SNX19-208ENST00000530330 HMGB1P09429 215 aaKnown RBP9.1□□□□□ -0.95
SNX19-208ENST00000530330 ERCC3P19447 782 aa9.1□□□□□ -0.95
SNX19-208ENST00000530330 GCGRP47871 477 aa9.1□□□□□ -0.95
SNX19-208ENST00000530330 PTPREP23469 700 aa9.09□□□□□ -0.95
SNX19-208ENST00000530330 DOK7Q18PE1 504 aa9.09□□□□□ -0.95
SNX19-208ENST00000530330 UCN2Q96RP3 112 aa9.09□□□□□ -0.95
SNX19-208ENST00000530330 FAM198AQ9UFP1 575 aa9.09□□□□□ -0.95
SNX19-208ENST00000530330 LOC105371045A0A1W2PR82 267 aa9.08□□□□□ -0.96
SNX19-208ENST00000530330 ATP9BO43861 1147 aa9.08□□□□□ -0.96
SNX19-208ENST00000530330 PRR7Q8TB68 274 aa9.08□□□□□ -0.96
SNX19-208ENST00000530330 TSKSQ9UJT2 592 aa9.08□□□□□ -0.96
SNX19-208ENST00000530330 TRIM6-TRIM34B2RNG4 842 aa9.07□□□□□ -0.96
SNX19-208ENST00000530330 GPR37L1O60883 481 aa9.07□□□□□ -0.96
SNX19-208ENST00000530330 NUDT7P0C024 238 aa9.07□□□□□ -0.96
SNX19-208ENST00000530330 ELOAQ14241 798 aaKnown RBP9.07□□□□□ -0.96
SNX19-208ENST00000530330 SLF2Q8IX21 1173 aa9.07□□□□□ -0.96
SNX19-208ENST00000530330 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
SNX19-208ENST00000530330 ZSWIM6Q9HCJ5 1215 aa9.07□□□□□ -0.96
SNX19-208ENST00000530330 CARNS1A5YM72 827 aa9.06□□□□□ -0.96
SNX19-208ENST00000530330 C6orf229H3BNL8 230 aa9.06□□□□□ -0.96
SNX19-208ENST00000530330 LRRN4Q8WUT4 740 aa9.06□□□□□ -0.96
SNX19-208ENST00000530330 COL9A1P20849 921 aa9.05□□□□□ -0.96
SNX19-208ENST00000530330 CDCA8Q53HL2 280 aa9.05□□□□□ -0.96
SNX19-208ENST00000530330 KCNH8Q96L42 1107 aa9.05□□□□□ -0.96
SNX19-208ENST00000530330 METRNQ9UJH8 293 aa9.05□□□□□ -0.96
SNX19-208ENST00000530330 RBM47A0AV96 593 aaKnown RBP9.04□□□□□ -0.96
SNX19-208ENST00000530330 HDGFP51858 240 aaKnown RBP9.04□□□□□ -0.96
SNX19-208ENST00000530330 USP35Q9P2H5 1018 aa9.04□□□□□ -0.96
SNX19-208ENST00000530330 PCDHGC3Q9UN70 934 aa9.04□□□□□ -0.96
SNX19-208ENST00000530330 NFATC2IPQ8NCF5 419 aa9.03□□□□□ -0.96
SNX19-208ENST00000530330 TBC1D9Q6ZT07 1266 aa9.02□□□□□ -0.97
SNX19-208ENST00000530330 PELP1Q8IZL8 1130 aaKnown RBP9.02□□□□□ -0.97
SNX19-208ENST00000530330 ZNF592Q92610 1267 aa9.02□□□□□ -0.97
SNX19-208ENST00000530330 CFAP99D6REC4 459 aa9.01□□□□□ -0.97
SNX19-208ENST00000530330 ARID4AP29374 1257 aaPredicted RBP9.01□□□□□ -0.97
SNX19-208ENST00000530330 ARSIQ5FYB1 569 aa9.01□□□□□ -0.97
SNX19-208ENST00000530330 CCDC180Q9P1Z9 1646 aa8.99□□□□□ -0.97
SNX19-208ENST00000530330 POTEFA5A3E0 1075 aa8.99□□□□□ -0.97
SNX19-208ENST00000530330 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
SNX19-208ENST00000530330 NR1H3Q13133 447 aa8.99□□□□□ -0.97
SNX19-208ENST00000530330 NR6A1Q15406 480 aa8.99□□□□□ -0.97
SNX19-208ENST00000530330 NOVA2Q9UNW9 492 aaKnown RBP8.99□□□□□ -0.97
SNX19-208ENST00000530330 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
SNX19-208ENST00000530330 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
SNX19-208ENST00000530330 TXNDC2Q86VQ3 553 aa8.97□□□□□ -0.97
SNX19-208ENST00000530330 EPS8L1Q8TE68 723 aa8.97□□□□□ -0.97
SNX19-208ENST00000530330 BCL11AQ9H165 835 aa8.97□□□□□ -0.97
SNX19-208ENST00000530330 FAM196BA6NMK8 535 aa8.96□□□□□ -0.98
SNX19-208ENST00000530330 SMAPO00193 183 aa8.96□□□□□ -0.98
SNX19-208ENST00000530330 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
SNX19-208ENST00000530330 LHX6Q9UPM6 363 aa8.96□□□□□ -0.98
SNX19-208ENST00000530330 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 USP17L4A6NCW7 530 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 C3orf80F5H4A9 247 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 GABBR2O75899 941 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 EVX2Q03828 476 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 DESI1Q6ICB0 168 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 LARP1Q6PKG0 1096 aaKnown RBP8.95□□□□□ -0.98
SNX19-208ENST00000530330 USP17L2Q6R6M4 530 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 USP17L1Q7RTZ2 530 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 KHSRPQ92945 711 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNX19-208ENST00000530330 HLA-CQ95604 372 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 SIRT1Q96EB6 747 aa8.95□□□□□ -0.98
SNX19-208ENST00000530330 ZBBXA8MT70 800 aa8.94□□□□□ -0.98
SNX19-208ENST00000530330 SLC10A3P09131 477 aa8.94□□□□□ -0.98
SNX19-208ENST00000530330 HSP90B1P14625 803 aaKnown RBP8.94□□□□□ -0.98
SNX19-208ENST00000530330 Q3C1V9 767 aa8.94□□□□□ -0.98
SNX19-208ENST00000530330 SWT1Q5T5J6 900 aaKnown RBP8.94□□□□□ -0.98
SNX19-208ENST00000530330 RETREG3Q86VR2 466 aa8.94□□□□□ -0.98
SNX19-208ENST00000530330 STK32AQ8WU08 396 aa8.94□□□□□ -0.98
SNX19-208ENST00000530330 ZMIZ1Q9ULJ6 1067 aa8.94□□□□□ -0.98
SNX19-208ENST00000530330 UNCXA6NJT0 531 aa8.93□□□□□ -0.98
SNX19-208ENST00000530330 USP17L5A8MUK1 530 aa8.93□□□□□ -0.98
SNX19-208ENST00000530330 SKIP12755 728 aa8.93□□□□□ -0.98
SNX19-208ENST00000530330 ATP6V1AP38606 617 aa8.93□□□□□ -0.98
SNX19-208ENST00000530330 FUT2Q10981 343 aa8.93□□□□□ -0.98
SNX19-208ENST00000530330 GPR153Q6NV75 609 aa8.93□□□□□ -0.98
SNX19-208ENST00000530330 MRRFQ96E11 262 aaKnown RBP8.93□□□□□ -0.98
SNX19-208ENST00000530330 ZC3H4Q9UPT8 1303 aaKnown RBP8.92□□□□□ -0.98
SNX19-208ENST00000530330 ATP5J2-PTCD1G3V325 749 aa8.92□□□□□ -0.98
SNX19-208ENST00000530330 SSFA2P28290 1259 aa8.92□□□□□ -0.98
SNX19-208ENST00000530330 FAM200AQ8TCP9 573 aa8.92□□□□□ -0.98
SNX19-208ENST00000530330 BCL2L13Q9BXK5 485 aa8.92□□□□□ -0.98
SNX19-208ENST00000530330 USP17L15C9J2P7 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L10C9JJH3 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L13C9JLJ4 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L12C9JPN9 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L11C9JVI0 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L21D6R901 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L18D6R9N7 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L22D6RA61 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L17D6RBQ6 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L19D6RCP7 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L20D6RJB6 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 LZTS3O60299 673 aaPredicted RBP8.91□□□□□ -0.98
SNX19-208ENST00000530330 CFHP08603 1231 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 USP17L24Q0WX57 530 aa8.91□□□□□ -0.98
SNX19-208ENST00000530330 KIAA1468Q9P260 1216 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms