RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 AHDC1Q5TGY3 1603 aaPredicted RBP24.38■■□□□ 1.49
SF3B2-209ENST00000530322 C1orf167Q5SNV9 1468 aa24.38■■□□□ 1.49
SF3B2-209ENST00000530322 COL16A1Q07092 1604 aaPredicted RBP24.36■■□□□ 1.49
SF3B2-209ENST00000530322 PRAM1Q96QH2 718 aa24.35■■□□□ 1.49
SF3B2-209ENST00000530322 TRAK1Q9UPV9 953 aa24.35■■□□□ 1.49
SF3B2-209ENST00000530322 PCGF6Q9BYE7 350 aa24.34■■□□□ 1.49
SF3B2-209ENST00000530322 NHSL1Q5SYE7 1610 aa24.33■■□□□ 1.49
SF3B2-209ENST00000530322 FMN2Q9NZ56 1722 aa24.32■■□□□ 1.48
SF3B2-209ENST00000530322 MED1Q15648 1581 aaPredicted RBP24.31■■□□□ 1.48
SF3B2-209ENST00000530322 ARHGEF28Q8N1W1 1705 aaKnown RBP24.31■■□□□ 1.48
SF3B2-209ENST00000530322 SAFB2Q14151 953 aaKnown RBP eCLIP24.3■■□□□ 1.48
SF3B2-209ENST00000530322 POGKQ9P215 609 aa24.3■■□□□ 1.48
SF3B2-209ENST00000530322 NBPF1Q3BBV0 1214 aa24.29■■□□□ 1.48
SF3B2-209ENST00000530322 ORAI2Q96SN7 254 aa24.29■■□□□ 1.48
SF3B2-209ENST00000530322 ADGRB2O60241 1585 aa24.28■■□□□ 1.48
SF3B2-209ENST00000530322 DISP3Q9P2K9 1392 aa24.28■■□□□ 1.48
SF3B2-209ENST00000530322 TRPM1Q7Z4N2 1603 aa24.27■■□□□ 1.48
SF3B2-209ENST00000530322 DDX17Q92841 729 aaKnown RBP24.25■■□□□ 1.47
SF3B2-209ENST00000530322 JCADQ9P266 1359 aa24.25■■□□□ 1.47
SF3B2-209ENST00000530322 NUTM2FA1L443 756 aa24.24■■□□□ 1.47
SF3B2-209ENST00000530322 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
SF3B2-209ENST00000530322 TONSLQ96HA7 1378 aa24.23■■□□□ 1.47
SF3B2-209ENST00000530322 SHPRHQ149N8 1683 aa24.22■■□□□ 1.47
SF3B2-209ENST00000530322 ESCO1Q5FWF5 840 aa24.22■■□□□ 1.47
SF3B2-209ENST00000530322 MINK1Q8N4C8 1332 aaPredicted RBP24.21■■□□□ 1.47
SF3B2-209ENST00000530322 HIRIP3Q9BW71 556 aaPredicted RBP24.2■■□□□ 1.46
SF3B2-209ENST00000530322 NBPF8Q3BBV2 869 aa24.19■■□□□ 1.46
SF3B2-209ENST00000530322 USP32Q8NFA0 1604 aa24.18■■□□□ 1.46
SF3B2-209ENST00000530322 SOS2Q07890 1332 aaPredicted RBP24.18■■□□□ 1.46
SF3B2-209ENST00000530322 KIF1AQ12756 1690 aa24.18■■□□□ 1.46
SF3B2-209ENST00000530322 LRRC59Q96AG4 307 aaKnown RBP24.17■■□□□ 1.46
SF3B2-209ENST00000530322 ANKARQ7Z5J8 1434 aa24.17■■□□□ 1.46
SF3B2-209ENST00000530322 NPHP3Q7Z494 1330 aa24.15■■□□□ 1.46
SF3B2-209ENST00000530322 WASLO00401 505 aaPredicted RBP24.15■■□□□ 1.46
SF3B2-209ENST00000530322 ROCK2O75116 1388 aaKnown RBP24.15■■□□□ 1.46
SF3B2-209ENST00000530322 SPATA31A6Q5VVP1 1343 aa24.14■■□□□ 1.46
SF3B2-209ENST00000530322 FOXO3O43524 673 aa24.14■■□□□ 1.45
SF3B2-209ENST00000530322 TULP4Q9NRJ4 1543 aa24.14■■□□□ 1.45
SF3B2-209ENST00000530322 PXDNQ92626 1479 aa24.13■■□□□ 1.45
SF3B2-209ENST00000530322 EIF3AQ14152 1382 aaKnown RBP24.13■■□□□ 1.45
SF3B2-209ENST00000530322 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
SF3B2-209ENST00000530322 GPRASP1Q5JY77 1395 aa24.12■■□□□ 1.45
SF3B2-209ENST00000530322 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
SF3B2-209ENST00000530322 QRICH2Q9H0J4 1663 aa24.11■■□□□ 1.45
SF3B2-209ENST00000530322 PHF8Q9UPP1 1060 aa24.11■■□□□ 1.45
SF3B2-209ENST00000530322 PRR36Q9H6K5 1346 aa24.1■■□□□ 1.45
SF3B2-209ENST00000530322 CENPJQ9HC77 1338 aaPredicted RBP24.1■■□□□ 1.45
SF3B2-209ENST00000530322 LRP6O75581 1613 aa24.1■■□□□ 1.45
SF3B2-209ENST00000530322 RALGAPBQ86X10 1494 aa24.09■■□□□ 1.45
SF3B2-209ENST00000530322 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
SF3B2-209ENST00000530322 XPCQ01831 940 aaPredicted RBP24.08■■□□□ 1.45
SF3B2-209ENST00000530322 ATP7BP35670 1465 aa24.07■■□□□ 1.44
SF3B2-209ENST00000530322 CDK19Q9BWU1 502 aa24.06■■□□□ 1.44
SF3B2-209ENST00000530322 ITSN1Q15811 1721 aa24.06■■□□□ 1.44
SF3B2-209ENST00000530322 ILDR2Q71H61 639 aa24.05■■□□□ 1.44
SF3B2-209ENST00000530322 COL22A1Q8NFW1 1626 aaPredicted RBP24.05■■□□□ 1.44
SF3B2-209ENST00000530322 KRT28Q7Z3Y7 464 aa24.04■■□□□ 1.44
SF3B2-209ENST00000530322 PMFBP1Q8TBY8 1022 aa24.04■■□□□ 1.44
SF3B2-209ENST00000530322 RGS17Q9UGC6 210 aaPredicted RBP24.04■■□□□ 1.44
SF3B2-209ENST00000530322 NUTM2BA6NNL0 878 aaPredicted RBP24.03■■□□□ 1.44
SF3B2-209ENST00000530322 NUTM2EB1AL46 878 aaPredicted RBP24.03■■□□□ 1.44
SF3B2-209ENST00000530322 NUTM2AQ8IVF1 878 aaPredicted RBP24.03■■□□□ 1.44
SF3B2-209ENST00000530322 NUDT16Q96DE0 195 aaKnown RBP24.03■■□□□ 1.44
SF3B2-209ENST00000530322 TOPAZ1Q8N9V7 1692 aa24.02■■□□□ 1.44
SF3B2-209ENST00000530322 CARD11Q9BXL7 1154 aa24.02■■□□□ 1.44
SF3B2-209ENST00000530322 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
SF3B2-209ENST00000530322 SPATA31A3Q5VYP0 1347 aa24■■□□□ 1.43
SF3B2-209ENST00000530322 PSME1Q06323 249 aa23.99■■□□□ 1.43
SF3B2-209ENST00000530322 MEX3CQ5U5Q3 659 aaKnown RBP23.99■■□□□ 1.43
SF3B2-209ENST00000530322 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
SF3B2-209ENST00000530322 TRPM3Q9HCF6 1732 aaPredicted RBP23.98■■□□□ 1.43
SF3B2-209ENST00000530322 SBNO1A3KN83 1393 aa23.97■■□□□ 1.43
SF3B2-209ENST00000530322 TNS3Q68CZ2 1445 aa23.97■■□□□ 1.43
SF3B2-209ENST00000530322 CCDC61Q9Y6R9 512 aa23.97■■□□□ 1.43
SF3B2-209ENST00000530322 SRPK2P78362 688 aaKnown RBP23.96■■□□□ 1.43
SF3B2-209ENST00000530322 CABP2Q9NPB3 220 aa23.95■■□□□ 1.42
SF3B2-209ENST00000530322 SBNO2Q9Y2G9 1366 aa23.94■■□□□ 1.42
SF3B2-209ENST00000530322 EVC2Q86UK5 1308 aa23.94■■□□□ 1.42
SF3B2-209ENST00000530322 NGDNQ8NEJ9 315 aaKnown RBP23.94■■□□□ 1.42
SF3B2-209ENST00000530322 POLR3AO14802 1390 aaPredicted RBP23.92■■□□□ 1.42
SF3B2-209ENST00000530322 PLEKHG3A1L390 1219 aa23.92■■□□□ 1.42
SF3B2-209ENST00000530322 ALS2Q96Q42 1657 aa23.92■■□□□ 1.42
SF3B2-209ENST00000530322 POTEAQ6S8J7 498 aa23.91■■□□□ 1.42
SF3B2-209ENST00000530322 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
SF3B2-209ENST00000530322 ADAMTS2O95450 1211 aa23.9■■□□□ 1.42
SF3B2-209ENST00000530322 PPIP5K1Q6PFW1 1433 aa23.9■■□□□ 1.42
SF3B2-209ENST00000530322 ARHGEF10O15013 1369 aa23.9■■□□□ 1.42
SF3B2-209ENST00000530322 ACEP12821 1306 aa23.89■■□□□ 1.42
SF3B2-209ENST00000530322 C8orf37Q96NL8 207 aa23.88■■□□□ 1.41
SF3B2-209ENST00000530322 ABCA3Q99758 1704 aa23.87■■□□□ 1.41
SF3B2-209ENST00000530322 AFF2P51816 1311 aa23.87■■□□□ 1.41
SF3B2-209ENST00000530322 LMOD2Q6P5Q4 547 aa23.87■■□□□ 1.41
SF3B2-209ENST00000530322 ZNF772Q68DY9 489 aaPredicted RBP23.86■■□□□ 1.41
SF3B2-209ENST00000530322 CABP1Q9NZU7 370 aa23.85■■□□□ 1.41
SF3B2-209ENST00000530322 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
SF3B2-209ENST00000530322 ST20-MTHFSA0A0A6YYL1 179 aa23.83■■□□□ 1.41
SF3B2-209ENST00000530322 PAK3O75914 559 aaPredicted RBP23.83■■□□□ 1.41
SF3B2-209ENST00000530322 CABLES1Q8TDN4 633 aa23.83■■□□□ 1.41
SF3B2-209ENST00000530322 ATAD2Q6PL18 1390 aa23.82■■□□□ 1.4
SF3B2-209ENST00000530322 TESK2Q96S53 571 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms