RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 ATF3P18847 181 aa12.48□□□□□ -0.41
UBASH3B-205ENST00000529998 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
UBASH3B-205ENST00000529998 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
UBASH3B-205ENST00000529998 DLC1Q96QB1 1528 aa12.47□□□□□ -0.41
UBASH3B-205ENST00000529998 FAM135BQ49AJ0 1406 aa12.47□□□□□ -0.41
UBASH3B-205ENST00000529998 CADPS2Q86UW7 1296 aa12.47□□□□□ -0.41
UBASH3B-205ENST00000529998 ARHGEF28Q8N1W1 1705 aaKnown RBP12.47□□□□□ -0.41
UBASH3B-205ENST00000529998 ROBO1Q9Y6N7 1651 aa12.47□□□□□ -0.41
UBASH3B-205ENST00000529998 DCCP43146 1447 aa12.46□□□□□ -0.41
UBASH3B-205ENST00000529998 SAFB2Q14151 953 aaKnown RBP eCLIP12.46□□□□□ -0.41
UBASH3B-205ENST00000529998 PRAM1Q96QH2 718 aa12.46□□□□□ -0.41
UBASH3B-205ENST00000529998 MST1RQ04912 1400 aa12.45□□□□□ -0.42
UBASH3B-205ENST00000529998 HSPA1LP34931 641 aa12.44□□□□□ -0.42
UBASH3B-205ENST00000529998 POGKQ9P215 609 aa12.44□□□□□ -0.42
UBASH3B-205ENST00000529998 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
UBASH3B-205ENST00000529998 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
UBASH3B-205ENST00000529998 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
UBASH3B-205ENST00000529998 C1orf167Q5SNV9 1468 aa12.41□□□□□ -0.42
UBASH3B-205ENST00000529998 BRINP3Q76B58 766 aa12.41□□□□□ -0.42
UBASH3B-205ENST00000529998 ROCK2O75116 1388 aaKnown RBP12.41□□□□□ -0.42
UBASH3B-205ENST00000529998 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
UBASH3B-205ENST00000529998 NUTM2FA1L443 756 aa12.4□□□□□ -0.42
UBASH3B-205ENST00000529998 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.42
UBASH3B-205ENST00000529998 TIMELESSQ9UNS1 1208 aa12.4□□□□□ -0.42
UBASH3B-205ENST00000529998 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.43
UBASH3B-205ENST00000529998 PHLPP1O60346 1717 aa12.4□□□□□ -0.43
UBASH3B-205ENST00000529998 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
UBASH3B-205ENST00000529998 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
UBASH3B-205ENST00000529998 GPRASP1Q5JY77 1395 aa12.39□□□□□ -0.43
UBASH3B-205ENST00000529998 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
UBASH3B-205ENST00000529998 NHSL1Q5SYE7 1610 aa12.37□□□□□ -0.43
UBASH3B-205ENST00000529998 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
UBASH3B-205ENST00000529998 DDX17Q92841 729 aaKnown RBP12.37□□□□□ -0.43
UBASH3B-205ENST00000529998 CARD11Q9BXL7 1154 aa12.37□□□□□ -0.43
UBASH3B-205ENST00000529998 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
UBASH3B-205ENST00000529998 WASLO00401 505 aaPredicted RBP12.36□□□□□ -0.43
UBASH3B-205ENST00000529998 ESCO1Q5FWF5 840 aa12.36□□□□□ -0.43
UBASH3B-205ENST00000529998 COL16A1Q07092 1604 aaPredicted RBP12.36□□□□□ -0.43
UBASH3B-205ENST00000529998 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
UBASH3B-205ENST00000529998 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
UBASH3B-205ENST00000529998 CDK19Q9BWU1 502 aa12.33□□□□□ -0.44
UBASH3B-205ENST00000529998 TULP4Q9NRJ4 1543 aa12.32□□□□□ -0.44
UBASH3B-205ENST00000529998 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
UBASH3B-205ENST00000529998 FOXO3O43524 673 aa12.32□□□□□ -0.44
UBASH3B-205ENST00000529998 KIF1AQ12756 1690 aa12.32□□□□□ -0.44
UBASH3B-205ENST00000529998 EIF3AQ14152 1382 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-205ENST00000529998 NUDT16Q96DE0 195 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-205ENST00000529998 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
UBASH3B-205ENST00000529998 ATP7BP35670 1465 aa12.3□□□□□ -0.44
UBASH3B-205ENST00000529998 XPCQ01831 940 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-205ENST00000529998 PMFBP1Q8TBY8 1022 aa12.3□□□□□ -0.44
UBASH3B-205ENST00000529998 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
UBASH3B-205ENST00000529998 SOS2Q07890 1332 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-205ENST00000529998 PXDNQ92626 1479 aa12.29□□□□□ -0.44
UBASH3B-205ENST00000529998 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
UBASH3B-205ENST00000529998 NPHP3Q7Z494 1330 aa12.29□□□□□ -0.44
UBASH3B-205ENST00000529998 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
UBASH3B-205ENST00000529998 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
UBASH3B-205ENST00000529998 ST20-MTHFSA0A0A6YYL1 179 aa12.28□□□□□ -0.44
UBASH3B-205ENST00000529998 SRPK2P78362 688 aaKnown RBP12.28□□□□□ -0.44
UBASH3B-205ENST00000529998 LRRC59Q96AG4 307 aaKnown RBP12.28□□□□□ -0.44
UBASH3B-205ENST00000529998 EVC2Q86UK5 1308 aa12.28□□□□□ -0.44
UBASH3B-205ENST00000529998 JCADQ9P266 1359 aa12.28□□□□□ -0.44
UBASH3B-205ENST00000529998 USP47Q96K76 1375 aa12.27□□□□□ -0.45
UBASH3B-205ENST00000529998 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.45
UBASH3B-205ENST00000529998 KRT28Q7Z3Y7 464 aa12.26□□□□□ -0.45
UBASH3B-205ENST00000529998 TESK2Q96S53 571 aa12.26□□□□□ -0.45
UBASH3B-205ENST00000529998 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
UBASH3B-205ENST00000529998 PSME1Q06323 249 aa12.25□□□□□ -0.45
UBASH3B-205ENST00000529998 MED1Q15648 1581 aaPredicted RBP12.25□□□□□ -0.45
UBASH3B-205ENST00000529998 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
UBASH3B-205ENST00000529998 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
UBASH3B-205ENST00000529998 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
UBASH3B-205ENST00000529998 NGDNQ8NEJ9 315 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-205ENST00000529998 TRPM3Q9HCF6 1732 aaPredicted RBP12.24□□□□□ -0.45
UBASH3B-205ENST00000529998 ACEP12821 1306 aa12.23□□□□□ -0.45
UBASH3B-205ENST00000529998 CABP1Q9NZU7 370 aa12.23□□□□□ -0.45
UBASH3B-205ENST00000529998 POLR3AO14802 1390 aaPredicted RBP12.22□□□□□ -0.45
UBASH3B-205ENST00000529998 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
UBASH3B-205ENST00000529998 SPATA31A3Q5VYP0 1347 aa12.22□□□□□ -0.45
UBASH3B-205ENST00000529998 LRP6O75581 1613 aa12.22□□□□□ -0.45
UBASH3B-205ENST00000529998 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
UBASH3B-205ENST00000529998 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
UBASH3B-205ENST00000529998 NUTM2BA6NNL0 878 aaPredicted RBP12.21□□□□□ -0.45
UBASH3B-205ENST00000529998 NUTM2EB1AL46 878 aaPredicted RBP12.21□□□□□ -0.45
UBASH3B-205ENST00000529998 NUTM2AQ8IVF1 878 aaPredicted RBP12.21□□□□□ -0.45
UBASH3B-205ENST00000529998 ALS2Q96Q42 1657 aa12.21□□□□□ -0.45
UBASH3B-205ENST00000529998 DISP3Q9P2K9 1392 aa12.2□□□□□ -0.46
UBASH3B-205ENST00000529998 AKAP12Q02952 1782 aa12.2□□□□□ -0.46
UBASH3B-205ENST00000529998 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
UBASH3B-205ENST00000529998 ATAD2Q6PL18 1390 aa12.19□□□□□ -0.46
UBASH3B-205ENST00000529998 HSPA5P11021 654 aaKnown RBP12.19□□□□□ -0.46
UBASH3B-205ENST00000529998 EIF4G2P78344 907 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBASH3B-205ENST00000529998 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
UBASH3B-205ENST00000529998 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
UBASH3B-205ENST00000529998 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
UBASH3B-205ENST00000529998 TMF1P82094 1093 aa12.18□□□□□ -0.46
UBASH3B-205ENST00000529998 PUS7Q96PZ0 661 aaKnown RBP12.18□□□□□ -0.46
UBASH3B-205ENST00000529998 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
UBASH3B-205ENST00000529998 TMC1Q8TDI8 760 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms