RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 PPLO60437 1756 aa24.26■■□□□ 1.47
COL16A1-216ENST00000529928 NPHP3Q7Z494 1330 aa24.26■■□□□ 1.47
COL16A1-216ENST00000529928 CDC42BPGQ6DT37 1551 aa24.25■■□□□ 1.47
COL16A1-216ENST00000529928 SLC4A1APQ9BWU0 796 aaKnown RBP24.25■■□□□ 1.47
COL16A1-216ENST00000529928 ATRNO75882 1429 aa24.24■■□□□ 1.47
COL16A1-216ENST00000529928 ESCO1Q5FWF5 840 aa24.23■■□□□ 1.47
COL16A1-216ENST00000529928 MYOM2P54296 1465 aa24.23■■□□□ 1.47
COL16A1-216ENST00000529928 PXDNQ92626 1479 aa24.2■■□□□ 1.47
COL16A1-216ENST00000529928 FOXD1Q16676 465 aa24.2■■□□□ 1.46
COL16A1-216ENST00000529928 LRPPRCP42704 1394 aaKnown RBP24.18■■□□□ 1.46
COL16A1-216ENST00000529928 FOXO3O43524 673 aa24.17■■□□□ 1.46
COL16A1-216ENST00000529928 BCL9LQ86UU0 1499 aa24.17■■□□□ 1.46
COL16A1-216ENST00000529928 TECPR2O15040 1411 aa24.16■■□□□ 1.46
COL16A1-216ENST00000529928 MARF1Q9Y4F3 1742 aaKnown RBP24.15■■□□□ 1.46
COL16A1-216ENST00000529928 ADGRF5Q8IZF2 1346 aa24.14■■□□□ 1.46
COL16A1-216ENST00000529928 CCDC144AA2RUR9 1427 aa24.14■■□□□ 1.45
COL16A1-216ENST00000529928 XPCQ01831 940 aaPredicted RBP24.14■■□□□ 1.45
COL16A1-216ENST00000529928 CCDC125Q86Z20 511 aa24.14■■□□□ 1.45
COL16A1-216ENST00000529928 ZRANB1Q9UGI0 708 aa24.13■■□□□ 1.45
COL16A1-216ENST00000529928 GJD4Q96KN9 370 aaPredicted RBP24.12■■□□□ 1.45
COL16A1-216ENST00000529928 STK26Q9P289 416 aa24.12■■□□□ 1.45
COL16A1-216ENST00000529928 ANKRD30BQ9BXX2 1392 aa24.12■■□□□ 1.45
COL16A1-216ENST00000529928 WAPLQ7Z5K2 1190 aa24.11■■□□□ 1.45
COL16A1-216ENST00000529928 NUTM2FA1L443 756 aa24.1■■□□□ 1.45
COL16A1-216ENST00000529928 ABCC11Q96J66 1382 aa24.1■■□□□ 1.45
COL16A1-216ENST00000529928 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
COL16A1-216ENST00000529928 KNDC1Q76NI1 1749 aa24.09■■□□□ 1.45
COL16A1-216ENST00000529928 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.09■■□□□ 1.45
COL16A1-216ENST00000529928 SPATA31E1Q6ZUB1 1445 aa24.09■■□□□ 1.45
COL16A1-216ENST00000529928 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
COL16A1-216ENST00000529928 KIF1AQ12756 1690 aa24.07■■□□□ 1.44
COL16A1-216ENST00000529928 SPATA31A3Q5VYP0 1347 aa24.07■■□□□ 1.44
COL16A1-216ENST00000529928 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
COL16A1-216ENST00000529928 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
COL16A1-216ENST00000529928 UNC5CLQ8IV45 518 aa24.06■■□□□ 1.44
COL16A1-216ENST00000529928 PIK3C2GO75747 1445 aa24.06■■□□□ 1.44
COL16A1-216ENST00000529928 EP400Q96L91 3159 aa24.06■■□□□ 1.44
COL16A1-216ENST00000529928 SLIT2O94813 1529 aa24.05■■□□□ 1.44
COL16A1-216ENST00000529928 PLEKHH1Q9ULM0 1364 aa24.05■■□□□ 1.44
COL16A1-216ENST00000529928 TMEM132EQ6IEE7 984 aa24.05■■□□□ 1.44
COL16A1-216ENST00000529928 YTHDC2Q9H6S0 1430 aaKnown RBP24.03■■□□□ 1.44
COL16A1-216ENST00000529928 RALGAPBQ86X10 1494 aa24.03■■□□□ 1.44
COL16A1-216ENST00000529928 GLI3P10071 1580 aa24.02■■□□□ 1.44
COL16A1-216ENST00000529928 USP32Q8NFA0 1604 aa24.02■■□□□ 1.44
COL16A1-216ENST00000529928 KRT28Q7Z3Y7 464 aa24.01■■□□□ 1.43
COL16A1-216ENST00000529928 BLMP54132 1417 aaPredicted RBP24.01■■□□□ 1.43
COL16A1-216ENST00000529928 SIRT1Q96EB6 747 aa24■■□□□ 1.43
COL16A1-216ENST00000529928 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
COL16A1-216ENST00000529928 HAP1P54257 671 aaPredicted RBP23.98■■□□□ 1.43
COL16A1-216ENST00000529928 TNS3Q68CZ2 1445 aa23.98■■□□□ 1.43
COL16A1-216ENST00000529928 PSME1Q06323 249 aa23.97■■□□□ 1.43
COL16A1-216ENST00000529928 PHF8Q9UPP1 1060 aa23.96■■□□□ 1.43
COL16A1-216ENST00000529928 C14orf93Q9H972 538 aaKnown RBP23.94■■□□□ 1.42
COL16A1-216ENST00000529928 VPS72Q15906 364 aa23.93■■□□□ 1.42
COL16A1-216ENST00000529928 SBNO1A3KN83 1393 aa23.92■■□□□ 1.42
COL16A1-216ENST00000529928 DHX57Q6P158 1386 aaKnown RBP23.92■■□□□ 1.42
COL16A1-216ENST00000529928 BRWD3Q6RI45 1802 aa23.92■■□□□ 1.42
COL16A1-216ENST00000529928 SF3B2Q13435 895 aaKnown RBP23.92■■□□□ 1.42
COL16A1-216ENST00000529928 SEPT12Q8IYM1 358 aa23.92■■□□□ 1.42
COL16A1-216ENST00000529928 NWD2Q9ULI1 1742 aa23.92■■□□□ 1.42
COL16A1-216ENST00000529928 NRXN1Q9ULB1 1477 aa23.92■■□□□ 1.42
COL16A1-216ENST00000529928 ARHGEF10O15013 1369 aa23.91■■□□□ 1.42
COL16A1-216ENST00000529928 RGPD8O14715 1765 aaPredicted RBP23.91■■□□□ 1.42
COL16A1-216ENST00000529928 CABLES1Q8TDN4 633 aa23.91■■□□□ 1.42
COL16A1-216ENST00000529928 PLCH1Q4KWH8 1693 aa23.9■■□□□ 1.42
COL16A1-216ENST00000529928 CCDC9Q9Y3X0 531 aaKnown RBP23.89■■□□□ 1.41
COL16A1-216ENST00000529928 ACIN1Q9UKV3 1341 aaKnown RBP23.88■■□□□ 1.41
COL16A1-216ENST00000529928 ABCA3Q99758 1704 aa23.88■■□□□ 1.41
COL16A1-216ENST00000529928 ONECUT3O60422 494 aaPredicted RBP23.88■■□□□ 1.41
COL16A1-216ENST00000529928 CFAP70Q5T0N1 1121 aa23.88■■□□□ 1.41
COL16A1-216ENST00000529928 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
COL16A1-216ENST00000529928 DEFB132Q7Z7B7 95 aa23.88■■□□□ 1.41
COL16A1-216ENST00000529928 PRAM1Q96QH2 718 aa23.88■■□□□ 1.41
COL16A1-216ENST00000529928 ANKARQ7Z5J8 1434 aa23.86■■□□□ 1.41
COL16A1-216ENST00000529928 PLEKHG5O94827 1062 aa23.86■■□□□ 1.41
COL16A1-216ENST00000529928 SAFB2Q14151 953 aaKnown RBP eCLIP23.85■■□□□ 1.41
COL16A1-216ENST00000529928 KRT27Q7Z3Y8 459 aa23.85■■□□□ 1.41
COL16A1-216ENST00000529928 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
COL16A1-216ENST00000529928 POGKQ9P215 609 aa23.83■■□□□ 1.41
COL16A1-216ENST00000529928 ADGRB2O60241 1585 aa23.82■■□□□ 1.4
COL16A1-216ENST00000529928 FAM83GA6ND36 823 aa23.81■■□□□ 1.4
COL16A1-216ENST00000529928 PMFBP1Q8TBY8 1022 aa23.81■■□□□ 1.4
COL16A1-216ENST00000529928 A0A0G2JS52 829 aa23.8■■□□□ 1.4
COL16A1-216ENST00000529928 MYT1Q01538 1121 aa23.8■■□□□ 1.4
COL16A1-216ENST00000529928 NRAPQ86VF7 1730 aa23.78■■□□□ 1.4
COL16A1-216ENST00000529928 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
COL16A1-216ENST00000529928 TRPM3Q9HCF6 1732 aaPredicted RBP23.77■■□□□ 1.4
COL16A1-216ENST00000529928 BAG6P46379 1132 aa23.77■■□□□ 1.4
COL16A1-216ENST00000529928 LRP5O75197 1615 aa23.77■■□□□ 1.4
COL16A1-216ENST00000529928 GPRASP1Q5JY77 1395 aa23.77■■□□□ 1.4
COL16A1-216ENST00000529928 BTG4Q9NY30 223 aa23.76■■□□□ 1.39
COL16A1-216ENST00000529928 ADGRB1O14514 1584 aa23.75■■□□□ 1.39
COL16A1-216ENST00000529928 FAM98CQ17RN3 349 aaKnown RBP23.75■■□□□ 1.39
COL16A1-216ENST00000529928 ALS2Q96Q42 1657 aa23.75■■□□□ 1.39
COL16A1-216ENST00000529928 COL14A1Q05707 1796 aaKnown RBP23.75■■□□□ 1.39
COL16A1-216ENST00000529928 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
COL16A1-216ENST00000529928 TRAK1Q9UPV9 953 aa23.72■■□□□ 1.39
COL16A1-216ENST00000529928 TULP4Q9NRJ4 1543 aa23.72■■□□□ 1.39
COL16A1-216ENST00000529928 MINK1Q8N4C8 1332 aaPredicted RBP23.7■■□□□ 1.38
COL16A1-216ENST00000529928 PRR36Q9H6K5 1346 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms