RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 FOXD1Q16676 465 aa16.16■□□□□ 0.18
LDLRAD3-204ENST00000529759 PPLO60437 1756 aa16.14■□□□□ 0.17
LDLRAD3-204ENST00000529759 FOXO3O43524 673 aa16.14■□□□□ 0.17
LDLRAD3-204ENST00000529759 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
LDLRAD3-204ENST00000529759 TRPC5Q9UL62 973 aaPredicted RBP16.14■□□□□ 0.17
LDLRAD3-204ENST00000529759 COL22A1Q8NFW1 1626 aaPredicted RBP16.14■□□□□ 0.17
LDLRAD3-204ENST00000529759 MYOM2P54296 1465 aa16.14■□□□□ 0.17
LDLRAD3-204ENST00000529759 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
LDLRAD3-204ENST00000529759 ESCO1Q5FWF5 840 aa16.13■□□□□ 0.17
LDLRAD3-204ENST00000529759 PXDNQ92626 1479 aa16.13■□□□□ 0.17
LDLRAD3-204ENST00000529759 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
LDLRAD3-204ENST00000529759 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
LDLRAD3-204ENST00000529759 PLEKHH1Q9ULM0 1364 aa16.12■□□□□ 0.17
LDLRAD3-204ENST00000529759 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
LDLRAD3-204ENST00000529759 STK26Q9P289 416 aa16.11■□□□□ 0.17
LDLRAD3-204ENST00000529759 MARF1Q9Y4F3 1742 aaKnown RBP16.11■□□□□ 0.17
LDLRAD3-204ENST00000529759 TMEM132EQ6IEE7 984 aa16.1■□□□□ 0.17
LDLRAD3-204ENST00000529759 GJD4Q96KN9 370 aaPredicted RBP16.08■□□□□ 0.16
LDLRAD3-204ENST00000529759 BRWD3Q6RI45 1802 aa16.08■□□□□ 0.16
LDLRAD3-204ENST00000529759 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
LDLRAD3-204ENST00000529759 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
LDLRAD3-204ENST00000529759 RPGRIP1LQ68CZ1 1315 aa16.07■□□□□ 0.16
LDLRAD3-204ENST00000529759 GLI3P10071 1580 aa16.07■□□□□ 0.16
LDLRAD3-204ENST00000529759 IFT172Q9UG01 1749 aa16.07■□□□□ 0.16
LDLRAD3-204ENST00000529759 CDC42BPGQ6DT37 1551 aa16.06■□□□□ 0.16
LDLRAD3-204ENST00000529759 NPHP3Q7Z494 1330 aa16.06■□□□□ 0.16
LDLRAD3-204ENST00000529759 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
LDLRAD3-204ENST00000529759 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
LDLRAD3-204ENST00000529759 DEFB132Q7Z7B7 95 aa16.05■□□□□ 0.16
LDLRAD3-204ENST00000529759 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
LDLRAD3-204ENST00000529759 CABLES1Q8TDN4 633 aa16.04■□□□□ 0.16
LDLRAD3-204ENST00000529759 RALGAPBQ86X10 1494 aa16.03■□□□□ 0.16
LDLRAD3-204ENST00000529759 SLIT2O94813 1529 aa16.03■□□□□ 0.16
LDLRAD3-204ENST00000529759 SPATA31A3Q5VYP0 1347 aa16.02■□□□□ 0.16
LDLRAD3-204ENST00000529759 UNC5CLQ8IV45 518 aa16.02■□□□□ 0.16
LDLRAD3-204ENST00000529759 SPATA31E1Q6ZUB1 1445 aa16.02■□□□□ 0.15
LDLRAD3-204ENST00000529759 FMN2Q9NZ56 1722 aa16.01■□□□□ 0.15
LDLRAD3-204ENST00000529759 TECPR2O15040 1411 aa16.01■□□□□ 0.15
LDLRAD3-204ENST00000529759 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
LDLRAD3-204ENST00000529759 TNKS1BP1Q9C0C2 1729 aaKnown RBP16■□□□□ 0.15
LDLRAD3-204ENST00000529759 KRT28Q7Z3Y7 464 aa16■□□□□ 0.15
LDLRAD3-204ENST00000529759 ABCC11Q96J66 1382 aa16■□□□□ 0.15
LDLRAD3-204ENST00000529759 KNDC1Q76NI1 1749 aa15.99■□□□□ 0.15
LDLRAD3-204ENST00000529759 CCDC144AA2RUR9 1427 aa15.98■□□□□ 0.15
LDLRAD3-204ENST00000529759 CCDC125Q86Z20 511 aa15.97■□□□□ 0.15
LDLRAD3-204ENST00000529759 SEPT12Q8IYM1 358 aa15.97■□□□□ 0.15
LDLRAD3-204ENST00000529759 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
LDLRAD3-204ENST00000529759 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
LDLRAD3-204ENST00000529759 SAFB2Q14151 953 aaKnown RBP eCLIP15.95■□□□□ 0.14
LDLRAD3-204ENST00000529759 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
LDLRAD3-204ENST00000529759 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
LDLRAD3-204ENST00000529759 FAM83GA6ND36 823 aa15.94■□□□□ 0.14
LDLRAD3-204ENST00000529759 CFAP70Q5T0N1 1121 aa15.94■□□□□ 0.14
LDLRAD3-204ENST00000529759 MPHOSPH9Q99550 1183 aa15.94■□□□□ 0.14
LDLRAD3-204ENST00000529759 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
LDLRAD3-204ENST00000529759 PLCH1Q4KWH8 1693 aa15.93■□□□□ 0.14
LDLRAD3-204ENST00000529759 VPS72Q15906 364 aa15.93■□□□□ 0.14
LDLRAD3-204ENST00000529759 ABCA3Q99758 1704 aa15.93■□□□□ 0.14
LDLRAD3-204ENST00000529759 ONECUT3O60422 494 aaPredicted RBP15.92■□□□□ 0.14
LDLRAD3-204ENST00000529759 FAM182BQ5T319 152 aa15.92■□□□□ 0.14
LDLRAD3-204ENST00000529759 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
LDLRAD3-204ENST00000529759 ANKRD30BQ9BXX2 1392 aa15.91■□□□□ 0.14
LDLRAD3-204ENST00000529759 PSDA5PKW4 1024 aaPredicted RBP15.91■□□□□ 0.14
LDLRAD3-204ENST00000529759 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
LDLRAD3-204ENST00000529759 C14orf93Q9H972 538 aaKnown RBP15.91■□□□□ 0.14
LDLRAD3-204ENST00000529759 KIF1AQ12756 1690 aa15.91■□□□□ 0.14
LDLRAD3-204ENST00000529759 TNS3Q68CZ2 1445 aa15.91■□□□□ 0.14
LDLRAD3-204ENST00000529759 PRAM1Q96QH2 718 aa15.89■□□□□ 0.13
LDLRAD3-204ENST00000529759 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
LDLRAD3-204ENST00000529759 KRT27Q7Z3Y8 459 aa15.88■□□□□ 0.13
LDLRAD3-204ENST00000529759 SIRT1Q96EB6 747 aa15.88■□□□□ 0.13
LDLRAD3-204ENST00000529759 NRXN1Q9ULB1 1477 aa15.88■□□□□ 0.13
LDLRAD3-204ENST00000529759 ACIN1Q9UKV3 1341 aaKnown RBP15.88■□□□□ 0.13
LDLRAD3-204ENST00000529759 HAP1P54257 671 aaPredicted RBP15.87■□□□□ 0.13
LDLRAD3-204ENST00000529759 FAM98CQ17RN3 349 aaKnown RBP15.87■□□□□ 0.13
LDLRAD3-204ENST00000529759 NRAPQ86VF7 1730 aa15.87■□□□□ 0.13
LDLRAD3-204ENST00000529759 NWD2Q9ULI1 1742 aa15.87■□□□□ 0.13
LDLRAD3-204ENST00000529759 PSME1Q06323 249 aa15.86■□□□□ 0.13
LDLRAD3-204ENST00000529759 HIRIP3Q9BW71 556 aaPredicted RBP15.86■□□□□ 0.13
LDLRAD3-204ENST00000529759 PRR36Q9H6K5 1346 aa15.86■□□□□ 0.13
LDLRAD3-204ENST00000529759 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
LDLRAD3-204ENST00000529759 TRPM3Q9HCF6 1732 aaPredicted RBP15.85■□□□□ 0.13
LDLRAD3-204ENST00000529759 HRCP23327 699 aa15.84■□□□□ 0.13
LDLRAD3-204ENST00000529759 EN1Q05925 392 aaPredicted RBP15.84■□□□□ 0.13
LDLRAD3-204ENST00000529759 BTG4Q9NY30 223 aa15.84■□□□□ 0.13
LDLRAD3-204ENST00000529759 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
LDLRAD3-204ENST00000529759 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
LDLRAD3-204ENST00000529759 LRP5O75197 1615 aa15.82■□□□□ 0.12
LDLRAD3-204ENST00000529759 ALS2Q96Q42 1657 aa15.82■□□□□ 0.12
LDLRAD3-204ENST00000529759 A0A0G2JS52 829 aa15.81■□□□□ 0.12
LDLRAD3-204ENST00000529759 MYT1Q01538 1121 aa15.81■□□□□ 0.12
LDLRAD3-204ENST00000529759 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
LDLRAD3-204ENST00000529759 TRAK1Q9UPV9 953 aa15.81■□□□□ 0.12
LDLRAD3-204ENST00000529759 ARHGEF10O15013 1369 aa15.8■□□□□ 0.12
LDLRAD3-204ENST00000529759 RAB3GAP2Q9H2M9 1393 aa15.8■□□□□ 0.12
LDLRAD3-204ENST00000529759 CRYBG1Q9Y4K1 1723 aa15.8■□□□□ 0.12
LDLRAD3-204ENST00000529759 ADGRB1O14514 1584 aa15.79■□□□□ 0.12
LDLRAD3-204ENST00000529759 POGKQ9P215 609 aa15.79■□□□□ 0.12
LDLRAD3-204ENST00000529759 SPATA31A5Q5VU36 1347 aa15.78■□□□□ 0.12
LDLRAD3-204ENST00000529759 SPATA31A7Q8IWB4 1347 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms