RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 NEXMIFQ5QGS0 1516 aa13.13□□□□□ -0.31
TGFBR3-208ENST00000529608 DCCP43146 1447 aa13.13□□□□□ -0.31
TGFBR3-208ENST00000529608 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
TGFBR3-208ENST00000529608 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
TGFBR3-208ENST00000529608 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
TGFBR3-208ENST00000529608 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
TGFBR3-208ENST00000529608 PPARGC1BQ86YN6 1023 aaKnown RBP13.1□□□□□ -0.31
TGFBR3-208ENST00000529608 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
TGFBR3-208ENST00000529608 AFF2P51816 1311 aa13.1□□□□□ -0.31
TGFBR3-208ENST00000529608 RXRBP28702 533 aa13.09□□□□□ -0.31
TGFBR3-208ENST00000529608 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
TGFBR3-208ENST00000529608 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-208ENST00000529608 PNPLA6Q8IY17 1366 aa13.08□□□□□ -0.31
TGFBR3-208ENST00000529608 RGS12O14924 1447 aa13.08□□□□□ -0.32
TGFBR3-208ENST00000529608 LAMC1P11047 1609 aa13.08□□□□□ -0.32
TGFBR3-208ENST00000529608 KIF1BO60333 1816 aa13.08□□□□□ -0.32
TGFBR3-208ENST00000529608 ZNF326Q5BKZ1 582 aaKnown RBP13.07□□□□□ -0.32
TGFBR3-208ENST00000529608 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
TGFBR3-208ENST00000529608 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
TGFBR3-208ENST00000529608 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
TGFBR3-208ENST00000529608 ROBO2Q9HCK4 1378 aa13.04□□□□□ -0.32
TGFBR3-208ENST00000529608 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
TGFBR3-208ENST00000529608 PPLO60437 1756 aa13.02□□□□□ -0.32
TGFBR3-208ENST00000529608 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
TGFBR3-208ENST00000529608 QTRT2Q9H974 415 aaKnown RBP13.02□□□□□ -0.33
TGFBR3-208ENST00000529608 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
TGFBR3-208ENST00000529608 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-208ENST00000529608 NAIPQ13075 1403 aa13.01□□□□□ -0.33
TGFBR3-208ENST00000529608 COL22A1Q8NFW1 1626 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-208ENST00000529608 PTCH1Q13635 1447 aa13□□□□□ -0.33
TGFBR3-208ENST00000529608 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
TGFBR3-208ENST00000529608 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
TGFBR3-208ENST00000529608 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
TGFBR3-208ENST00000529608 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-208ENST00000529608 PRAG1Q86YV5 1406 aa12.98□□□□□ -0.33
TGFBR3-208ENST00000529608 NGLY1Q96IV0 654 aa12.97□□□□□ -0.33
TGFBR3-208ENST00000529608 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
TGFBR3-208ENST00000529608 IFT172Q9UG01 1749 aa12.95□□□□□ -0.34
TGFBR3-208ENST00000529608 MYOM2P54296 1465 aa12.95□□□□□ -0.34
TGFBR3-208ENST00000529608 PXDNQ92626 1479 aa12.95□□□□□ -0.34
TGFBR3-208ENST00000529608 ATRNO75882 1429 aa12.95□□□□□ -0.34
TGFBR3-208ENST00000529608 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
TGFBR3-208ENST00000529608 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
TGFBR3-208ENST00000529608 USP21Q9UK80 565 aa12.94□□□□□ -0.34
TGFBR3-208ENST00000529608 BCL9LQ86UU0 1499 aa12.93□□□□□ -0.34
TGFBR3-208ENST00000529608 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
TGFBR3-208ENST00000529608 HFM1A2PYH4 1435 aa12.93□□□□□ -0.34
TGFBR3-208ENST00000529608 XPCQ01831 940 aaPredicted RBP12.92□□□□□ -0.34
TGFBR3-208ENST00000529608 RGPD8O14715 1765 aaPredicted RBP12.91□□□□□ -0.34
TGFBR3-208ENST00000529608 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
TGFBR3-208ENST00000529608 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
TGFBR3-208ENST00000529608 ADGRF5Q8IZF2 1346 aa12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 ESCO1Q5FWF5 840 aa12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 TRPC5Q9UL62 973 aaPredicted RBP12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 EP400Q96L91 3159 aa12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 PLEKHH1Q9ULM0 1364 aa12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 BRWD3Q6RI45 1802 aa12.9□□□□□ -0.34
TGFBR3-208ENST00000529608 GLI3P10071 1580 aa12.9□□□□□ -0.35
TGFBR3-208ENST00000529608 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
TGFBR3-208ENST00000529608 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
TGFBR3-208ENST00000529608 WAPLQ7Z5K2 1190 aa12.89□□□□□ -0.35
TGFBR3-208ENST00000529608 FOXO3O43524 673 aa12.88□□□□□ -0.35
TGFBR3-208ENST00000529608 TECPR2O15040 1411 aa12.88□□□□□ -0.35
TGFBR3-208ENST00000529608 SPATA31E1Q6ZUB1 1445 aa12.88□□□□□ -0.35
TGFBR3-208ENST00000529608 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
TGFBR3-208ENST00000529608 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
TGFBR3-208ENST00000529608 PITPNM1O00562 1244 aa12.86□□□□□ -0.35
TGFBR3-208ENST00000529608 TMEM132EQ6IEE7 984 aa12.86□□□□□ -0.35
TGFBR3-208ENST00000529608 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
TGFBR3-208ENST00000529608 STK26Q9P289 416 aa12.86□□□□□ -0.35
TGFBR3-208ENST00000529608 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
TGFBR3-208ENST00000529608 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
TGFBR3-208ENST00000529608 SLIT2O94813 1529 aa12.85□□□□□ -0.35
TGFBR3-208ENST00000529608 LRPPRCP42704 1394 aaKnown RBP12.84□□□□□ -0.35
TGFBR3-208ENST00000529608 KIF1AQ12756 1690 aa12.84□□□□□ -0.35
TGFBR3-208ENST00000529608 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
TGFBR3-208ENST00000529608 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
TGFBR3-208ENST00000529608 RALGAPBQ86X10 1494 aa12.84□□□□□ -0.35
TGFBR3-208ENST00000529608 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.35
TGFBR3-208ENST00000529608 PIK3C2GO75747 1445 aa12.83□□□□□ -0.36
TGFBR3-208ENST00000529608 SPATA31A3Q5VYP0 1347 aa12.83□□□□□ -0.36
TGFBR3-208ENST00000529608 ABCC11Q96J66 1382 aa12.82□□□□□ -0.36
TGFBR3-208ENST00000529608 CCDC144AA2RUR9 1427 aa12.81□□□□□ -0.36
TGFBR3-208ENST00000529608 YTHDC2Q9H6S0 1430 aaKnown RBP12.81□□□□□ -0.36
TGFBR3-208ENST00000529608 UNC5CLQ8IV45 518 aa12.8□□□□□ -0.36
TGFBR3-208ENST00000529608 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
TGFBR3-208ENST00000529608 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
TGFBR3-208ENST00000529608 KRT28Q7Z3Y7 464 aa12.79□□□□□ -0.36
TGFBR3-208ENST00000529608 ANKRD30BQ9BXX2 1392 aa12.79□□□□□ -0.36
TGFBR3-208ENST00000529608 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
TGFBR3-208ENST00000529608 DEFB132Q7Z7B7 95 aa12.78□□□□□ -0.36
TGFBR3-208ENST00000529608 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-208ENST00000529608 MPHOSPH9Q99550 1183 aa12.78□□□□□ -0.36
TGFBR3-208ENST00000529608 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
TGFBR3-208ENST00000529608 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
TGFBR3-208ENST00000529608 CCDC125Q86Z20 511 aa12.77□□□□□ -0.37
TGFBR3-208ENST00000529608 BLMP54132 1417 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms