RNA–Protein interactions for RNA: ENST00000529542.1

HIF3A-213, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-213ENST00000529542 ADGRF5Q8IZF2 1346 aa21.33■■□□□ 1.01
HIF3A-213ENST00000529542 TECPR2O15040 1411 aa21.33■■□□□ 1.01
HIF3A-213ENST00000529542 FOXD1Q16676 465 aa21.33■■□□□ 1.01
HIF3A-213ENST00000529542 CDC42BPGQ6DT37 1551 aa21.32■■□□□ 1
HIF3A-213ENST00000529542 SPATA31E1Q6ZUB1 1445 aa21.32■■□□□ 1
HIF3A-213ENST00000529542 ADAMTS2O95450 1211 aa21.32■■□□□ 1
HIF3A-213ENST00000529542 RGL3Q3MIN7 710 aa21.32■■□□□ 1
HIF3A-213ENST00000529542 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
HIF3A-213ENST00000529542 ABCC11Q96J66 1382 aa21.32■■□□□ 1
HIF3A-213ENST00000529542 ESCO1Q5FWF5 840 aa21.31■■□□□ 1
HIF3A-213ENST00000529542 FNBP4Q8N3X1 1017 aaPredicted RBP21.3■■□□□ 1
HIF3A-213ENST00000529542 TRPC5Q9UL62 973 aaPredicted RBP21.29■■□□□ 1
HIF3A-213ENST00000529542 SIRT1Q96EB6 747 aa21.28■■□□□ 1
HIF3A-213ENST00000529542 USP21Q9UK80 565 aa21.28■■□□□ 1
HIF3A-213ENST00000529542 STK26Q9P289 416 aa21.27■■□□□ 1
HIF3A-213ENST00000529542 RGS12O14924 1447 aa21.27■■□□□ 1
HIF3A-213ENST00000529542 PIK3C2GO75747 1445 aa21.26■□□□□ 0.99
HIF3A-213ENST00000529542 COL22A1Q8NFW1 1626 aaPredicted RBP21.26■□□□□ 0.99
HIF3A-213ENST00000529542 FOXO3O43524 673 aa21.25■□□□□ 0.99
HIF3A-213ENST00000529542 WAPLQ7Z5K2 1190 aa21.25■□□□□ 0.99
HIF3A-213ENST00000529542 MYOM2P54296 1465 aa21.23■□□□□ 0.99
HIF3A-213ENST00000529542 PXDNQ92626 1479 aa21.23■□□□□ 0.99
HIF3A-213ENST00000529542 IFT172Q9UG01 1749 aa21.22■□□□□ 0.99
HIF3A-213ENST00000529542 TMEM132EQ6IEE7 984 aa21.22■□□□□ 0.99
HIF3A-213ENST00000529542 C14orf93Q9H972 538 aaKnown RBP21.22■□□□□ 0.99
HIF3A-213ENST00000529542 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
HIF3A-213ENST00000529542 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
HIF3A-213ENST00000529542 ATAD2Q6PL18 1390 aa21.21■□□□□ 0.99
HIF3A-213ENST00000529542 ATRNO75882 1429 aa21.2■□□□□ 0.98
HIF3A-213ENST00000529542 DHX57Q6P158 1386 aaKnown RBP21.19■□□□□ 0.98
HIF3A-213ENST00000529542 NUTM2FA1L443 756 aa21.17■□□□□ 0.98
HIF3A-213ENST00000529542 PLEKHH1Q9ULM0 1364 aa21.17■□□□□ 0.98
HIF3A-213ENST00000529542 NRXN1Q9ULB1 1477 aa21.16■□□□□ 0.98
HIF3A-213ENST00000529542 SPATA31A3Q5VYP0 1347 aa21.16■□□□□ 0.98
HIF3A-213ENST00000529542 XPCQ01831 940 aaPredicted RBP21.16■□□□□ 0.98
HIF3A-213ENST00000529542 PSME1Q06323 249 aa21.15■□□□□ 0.98
HIF3A-213ENST00000529542 KIF1AQ12756 1690 aa21.15■□□□□ 0.98
HIF3A-213ENST00000529542 BCL9LQ86UU0 1499 aa21.14■□□□□ 0.98
HIF3A-213ENST00000529542 KRT28Q7Z3Y7 464 aa21.14■□□□□ 0.97
HIF3A-213ENST00000529542 CCDC125Q86Z20 511 aa21.14■□□□□ 0.97
HIF3A-213ENST00000529542 FMN2Q9NZ56 1722 aa21.14■□□□□ 0.97
HIF3A-213ENST00000529542 GJD4Q96KN9 370 aaPredicted RBP21.13■□□□□ 0.97
HIF3A-213ENST00000529542 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
HIF3A-213ENST00000529542 STAC3Q96MF2 364 aa21.12■□□□□ 0.97
HIF3A-213ENST00000529542 PHF8Q9UPP1 1060 aa21.12■□□□□ 0.97
HIF3A-213ENST00000529542 UNC5CLQ8IV45 518 aa21.11■□□□□ 0.97
HIF3A-213ENST00000529542 MARF1Q9Y4F3 1742 aaKnown RBP21.1■□□□□ 0.97
HIF3A-213ENST00000529542 PRAM1Q96QH2 718 aa21.09■□□□□ 0.97
HIF3A-213ENST00000529542 POGKQ9P215 609 aa21.08■□□□□ 0.97
HIF3A-213ENST00000529542 DLC1Q96QB1 1528 aa21.08■□□□□ 0.96
HIF3A-213ENST00000529542 SBNO1A3KN83 1393 aa21.08■□□□□ 0.96
HIF3A-213ENST00000529542 HAP1P54257 671 aaPredicted RBP21.07■□□□□ 0.96
HIF3A-213ENST00000529542 SLIT2O94813 1529 aa21.07■□□□□ 0.96
HIF3A-213ENST00000529542 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
HIF3A-213ENST00000529542 TNS3Q68CZ2 1445 aa21.06■□□□□ 0.96
HIF3A-213ENST00000529542 ANKARQ7Z5J8 1434 aa21.06■□□□□ 0.96
HIF3A-213ENST00000529542 ARHGEF10O15013 1369 aa21.06■□□□□ 0.96
HIF3A-213ENST00000529542 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.06■□□□□ 0.96
HIF3A-213ENST00000529542 HRCP23327 699 aa21.04■□□□□ 0.96
HIF3A-213ENST00000529542 EIF3AQ14152 1382 aaKnown RBP21.03■□□□□ 0.96
HIF3A-213ENST00000529542 SAFB2Q14151 953 aaKnown RBP eCLIP21.02■□□□□ 0.96
HIF3A-213ENST00000529542 ZRANB1Q9UGI0 708 aa21.02■□□□□ 0.96
HIF3A-213ENST00000529542 USP32Q8NFA0 1604 aa21.02■□□□□ 0.96
HIF3A-213ENST00000529542 VPS72Q15906 364 aa21.01■□□□□ 0.95
HIF3A-213ENST00000529542 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
HIF3A-213ENST00000529542 ADGRB2O60241 1585 aa20.99■□□□□ 0.95
HIF3A-213ENST00000529542 LMOD2Q6P5Q4 547 aa20.99■□□□□ 0.95
HIF3A-213ENST00000529542 ADGRB1O14514 1584 aa20.98■□□□□ 0.95
HIF3A-213ENST00000529542 RGPD8O14715 1765 aaPredicted RBP20.98■□□□□ 0.95
HIF3A-213ENST00000529542 DCAF11Q8TEB1 546 aa20.98■□□□□ 0.95
HIF3A-213ENST00000529542 TRAK1Q9UPV9 953 aa20.98■□□□□ 0.95
HIF3A-213ENST00000529542 GPRASP1Q5JY77 1395 aa20.97■□□□□ 0.95
HIF3A-213ENST00000529542 ONECUT3O60422 494 aaPredicted RBP20.97■□□□□ 0.95
HIF3A-213ENST00000529542 PMFBP1Q8TBY8 1022 aa20.97■□□□□ 0.95
HIF3A-213ENST00000529542 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
HIF3A-213ENST00000529542 GLI3P10071 1580 aa20.96■□□□□ 0.95
HIF3A-213ENST00000529542 BLMP54132 1417 aaPredicted RBP20.95■□□□□ 0.95
HIF3A-213ENST00000529542 KDM2AQ9Y2K7 1162 aa20.95■□□□□ 0.94
HIF3A-213ENST00000529542 NWD2Q9ULI1 1742 aa20.95■□□□□ 0.94
HIF3A-213ENST00000529542 WASLO00401 505 aaPredicted RBP20.94■□□□□ 0.94
HIF3A-213ENST00000529542 SEPT12Q8IYM1 358 aa20.94■□□□□ 0.94
HIF3A-213ENST00000529542 FAM83GA6ND36 823 aa20.93■□□□□ 0.94
HIF3A-213ENST00000529542 CCDC9Q9Y3X0 531 aaKnown RBP20.93■□□□□ 0.94
HIF3A-213ENST00000529542 SF3B2Q13435 895 aaKnown RBP20.92■□□□□ 0.94
HIF3A-213ENST00000529542 HIRIP3Q9BW71 556 aaPredicted RBP20.92■□□□□ 0.94
HIF3A-213ENST00000529542 MINK1Q8N4C8 1332 aaPredicted RBP20.92■□□□□ 0.94
HIF3A-213ENST00000529542 TULP4Q9NRJ4 1543 aa20.92■□□□□ 0.94
HIF3A-213ENST00000529542 NGDNQ8NEJ9 315 aaKnown RBP20.9■□□□□ 0.94
HIF3A-213ENST00000529542 PRR36Q9H6K5 1346 aa20.89■□□□□ 0.93
HIF3A-213ENST00000529542 KRT27Q7Z3Y8 459 aa20.89■□□□□ 0.93
HIF3A-213ENST00000529542 EP400Q96L91 3159 aa20.89■□□□□ 0.93
HIF3A-213ENST00000529542 PLEKHG5O94827 1062 aa20.88■□□□□ 0.93
HIF3A-213ENST00000529542 PLCH1Q4KWH8 1693 aa20.88■□□□□ 0.93
HIF3A-213ENST00000529542 ABCA3Q99758 1704 aa20.87■□□□□ 0.93
HIF3A-213ENST00000529542 BTG4Q9NY30 223 aa20.86■□□□□ 0.93
HIF3A-213ENST00000529542 TRPM3Q9HCF6 1732 aaPredicted RBP20.86■□□□□ 0.93
HIF3A-213ENST00000529542 ALS2Q96Q42 1657 aa20.84■□□□□ 0.93
HIF3A-213ENST00000529542 BRWD3Q6RI45 1802 aa20.83■□□□□ 0.93
HIF3A-213ENST00000529542 PAK3O75914 559 aaPredicted RBP20.83■□□□□ 0.93
HIF3A-213ENST00000529542 NUDT16Q96DE0 195 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms