RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 GLI3P10071 1580 aa21.76■■□□□ 1.07
TRIM3-208ENST00000529058 SF3B2Q13435 895 aaKnown RBP21.76■■□□□ 1.07
TRIM3-208ENST00000529058 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
TRIM3-208ENST00000529058 NUP155O75694 1391 aa21.74■■□□□ 1.07
TRIM3-208ENST00000529058 RALGAPBQ86X10 1494 aa21.74■■□□□ 1.07
TRIM3-208ENST00000529058 NEXMIFQ5QGS0 1516 aa21.74■■□□□ 1.07
TRIM3-208ENST00000529058 NPHP3Q7Z494 1330 aa21.74■■□□□ 1.07
TRIM3-208ENST00000529058 PXDNQ92626 1479 aa21.72■■□□□ 1.07
TRIM3-208ENST00000529058 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
TRIM3-208ENST00000529058 UNC5CLQ8IV45 518 aa21.71■■□□□ 1.07
TRIM3-208ENST00000529058 SLIT2O94813 1529 aa21.7■■□□□ 1.06
TRIM3-208ENST00000529058 ESCO1Q5FWF5 840 aa21.68■■□□□ 1.06
TRIM3-208ENST00000529058 PRAG1Q86YV5 1406 aa21.67■■□□□ 1.06
TRIM3-208ENST00000529058 ROCK1Q13464 1354 aa21.67■■□□□ 1.06
TRIM3-208ENST00000529058 PSDA5PKW4 1024 aaPredicted RBP21.67■■□□□ 1.06
TRIM3-208ENST00000529058 HRCP23327 699 aa21.67■■□□□ 1.06
TRIM3-208ENST00000529058 HFM1A2PYH4 1435 aa21.65■■□□□ 1.06
TRIM3-208ENST00000529058 KIF1BO60333 1816 aa21.65■■□□□ 1.06
TRIM3-208ENST00000529058 XPCQ01831 940 aaPredicted RBP21.65■■□□□ 1.06
TRIM3-208ENST00000529058 SEPT12Q8IYM1 358 aa21.65■■□□□ 1.06
TRIM3-208ENST00000529058 CLTCL1P53675 1640 aa21.65■■□□□ 1.06
TRIM3-208ENST00000529058 FOXO3O43524 673 aa21.64■■□□□ 1.05
TRIM3-208ENST00000529058 CDC42BPGQ6DT37 1551 aa21.64■■□□□ 1.05
TRIM3-208ENST00000529058 LRPPRCP42704 1394 aaKnown RBP21.62■■□□□ 1.05
TRIM3-208ENST00000529058 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
TRIM3-208ENST00000529058 BAG6P46379 1132 aa21.61■■□□□ 1.05
TRIM3-208ENST00000529058 KRT27Q7Z3Y8 459 aa21.6■■□□□ 1.05
TRIM3-208ENST00000529058 VGFO15240 615 aaPredicted RBP21.58■■□□□ 1.05
TRIM3-208ENST00000529058 ONECUT3O60422 494 aaPredicted RBP21.58■■□□□ 1.05
TRIM3-208ENST00000529058 VPS72Q15906 364 aa21.58■■□□□ 1.05
TRIM3-208ENST00000529058 NWD2Q9ULI1 1742 aa21.58■■□□□ 1.04
TRIM3-208ENST00000529058 PLCH1Q4KWH8 1693 aa21.56■■□□□ 1.04
TRIM3-208ENST00000529058 SPATA31A3Q5VYP0 1347 aa21.55■■□□□ 1.04
TRIM3-208ENST00000529058 CCDC9Q9Y3X0 531 aaKnown RBP21.54■■□□□ 1.04
TRIM3-208ENST00000529058 NAIPQ13075 1403 aa21.53■■□□□ 1.04
TRIM3-208ENST00000529058 RGPD1P0DJD0 1748 aa21.52■■□□□ 1.04
TRIM3-208ENST00000529058 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
TRIM3-208ENST00000529058 KIF1AQ12756 1690 aa21.52■■□□□ 1.04
TRIM3-208ENST00000529058 HAP1P54257 671 aaPredicted RBP21.51■■□□□ 1.03
TRIM3-208ENST00000529058 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
TRIM3-208ENST00000529058 EN1Q05925 392 aaPredicted RBP21.5■■□□□ 1.03
TRIM3-208ENST00000529058 R3HDM1Q15032 1099 aaKnown RBP21.5■■□□□ 1.03
TRIM3-208ENST00000529058 PPLO60437 1756 aa21.5■■□□□ 1.03
TRIM3-208ENST00000529058 YY1P25490 414 aa21.49■■□□□ 1.03
TRIM3-208ENST00000529058 A0A0G2JS52 829 aa21.48■■□□□ 1.03
TRIM3-208ENST00000529058 MYT1Q01538 1121 aa21.48■■□□□ 1.03
TRIM3-208ENST00000529058 ABCA3Q99758 1704 aa21.47■■□□□ 1.03
TRIM3-208ENST00000529058 FMN2Q9NZ56 1722 aa21.47■■□□□ 1.03
TRIM3-208ENST00000529058 KRT28Q7Z3Y7 464 aa21.47■■□□□ 1.03
TRIM3-208ENST00000529058 RPGRIP1LQ68CZ1 1315 aa21.47■■□□□ 1.03
TRIM3-208ENST00000529058 TNS3Q68CZ2 1445 aa21.46■■□□□ 1.03
TRIM3-208ENST00000529058 ITGAEP38570 1179 aa21.45■■□□□ 1.02
TRIM3-208ENST00000529058 CABLES1Q8TDN4 633 aa21.45■■□□□ 1.02
TRIM3-208ENST00000529058 DISP2A7MBM2 1401 aa21.44■■□□□ 1.02
TRIM3-208ENST00000529058 NRAPQ86VF7 1730 aa21.43■■□□□ 1.02
TRIM3-208ENST00000529058 TNS1Q9HBL0 1735 aaKnown RBP21.43■■□□□ 1.02
TRIM3-208ENST00000529058 FAM98CQ17RN3 349 aaKnown RBP21.43■■□□□ 1.02
TRIM3-208ENST00000529058 WAPLQ7Z5K2 1190 aa21.43■■□□□ 1.02
TRIM3-208ENST00000529058 RGPD8O14715 1765 aaPredicted RBP21.42■■□□□ 1.02
TRIM3-208ENST00000529058 TECPR2O15040 1411 aa21.42■■□□□ 1.02
TRIM3-208ENST00000529058 PLEKHG5O94827 1062 aa21.41■■□□□ 1.02
TRIM3-208ENST00000529058 PSME1Q06323 249 aa21.41■■□□□ 1.02
TRIM3-208ENST00000529058 KNDC1Q76NI1 1749 aa21.4■■□□□ 1.02
TRIM3-208ENST00000529058 FAM83GA6ND36 823 aa21.39■■□□□ 1.01
TRIM3-208ENST00000529058 STK26Q9P289 416 aa21.39■■□□□ 1.01
TRIM3-208ENST00000529058 PLEKHH1Q9ULM0 1364 aa21.38■■□□□ 1.01
TRIM3-208ENST00000529058 EZH2Q15910 746 aaKnown RBP21.38■■□□□ 1.01
TRIM3-208ENST00000529058 FAM182BQ5T319 152 aa21.38■■□□□ 1.01
TRIM3-208ENST00000529058 SBNO1A3KN83 1393 aa21.37■■□□□ 1.01
TRIM3-208ENST00000529058 ARHGEF10O15013 1369 aa21.37■■□□□ 1.01
TRIM3-208ENST00000529058 IFT172Q9UG01 1749 aa21.37■■□□□ 1.01
TRIM3-208ENST00000529058 LMOD2Q6P5Q4 547 aa21.36■■□□□ 1.01
TRIM3-208ENST00000529058 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
TRIM3-208ENST00000529058 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
TRIM3-208ENST00000529058 ABCC11Q96J66 1382 aa21.35■■□□□ 1.01
TRIM3-208ENST00000529058 BTG4Q9NY30 223 aa21.34■■□□□ 1.01
TRIM3-208ENST00000529058 THSD7AQ9UPZ6 1657 aa21.34■■□□□ 1.01
TRIM3-208ENST00000529058 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1.01
TRIM3-208ENST00000529058 NRXN1Q9ULB1 1477 aa21.33■■□□□ 1.01
TRIM3-208ENST00000529058 CAMKK2Q96RR4 588 aa21.33■■□□□ 1.01
TRIM3-208ENST00000529058 ADGRF5Q8IZF2 1346 aa21.32■■□□□ 1
TRIM3-208ENST00000529058 RRBP1Q9P2E9 1410 aaKnown RBP21.31■■□□□ 1
TRIM3-208ENST00000529058 PARD3Q8TEW0 1356 aa21.3■■□□□ 1
TRIM3-208ENST00000529058 SPATA31A5Q5VU36 1347 aa21.29■■□□□ 1
TRIM3-208ENST00000529058 SPATA31A7Q8IWB4 1347 aa21.29■■□□□ 1
TRIM3-208ENST00000529058 RREB1Q92766 1687 aa21.29■■□□□ 1
TRIM3-208ENST00000529058 TMEM132EQ6IEE7 984 aa21.29■■□□□ 1
TRIM3-208ENST00000529058 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
TRIM3-208ENST00000529058 TRIM37O94972 964 aa21.27■■□□□ 1
TRIM3-208ENST00000529058 NUP188Q5SRE5 1749 aa21.26■□□□□ 0.99
TRIM3-208ENST00000529058 FAM196AQ6ZSG2 479 aa21.26■□□□□ 0.99
TRIM3-208ENST00000529058 YTHDC2Q9H6S0 1430 aaKnown RBP21.26■□□□□ 0.99
TRIM3-208ENST00000529058 TRPM3Q9HCF6 1732 aaPredicted RBP21.26■□□□□ 0.99
TRIM3-208ENST00000529058 APBA3O96018 575 aa21.25■□□□□ 0.99
TRIM3-208ENST00000529058 SIRT1Q96EB6 747 aa21.24■□□□□ 0.99
TRIM3-208ENST00000529058 PPP1R1BQ9UD71 204 aaPredicted RBP21.24■□□□□ 0.99
TRIM3-208ENST00000529058 ALS2Q96Q42 1657 aa21.24■□□□□ 0.99
TRIM3-208ENST00000529058 ANKRD30BQ9BXX2 1392 aa21.23■□□□□ 0.99
TRIM3-208ENST00000529058 NINLQ9Y2I6 1382 aa21.23■□□□□ 0.99
TRIM3-208ENST00000529058 NBPF8Q3BBV2 869 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms