RNA–Protein interactions for RNA: ENST00000529040.1

TRIM29-212, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-212ENST00000529040 SOS2Q07890 1332 aaPredicted RBP17.64■□□□□ 0.41
TRIM29-212ENST00000529040 KNDC1Q76NI1 1749 aa17.62■□□□□ 0.41
TRIM29-212ENST00000529040 CCDC144AA2RUR9 1427 aa17.59■□□□□ 0.41
TRIM29-212ENST00000529040 USP21Q9UK80 565 aa17.59■□□□□ 0.41
TRIM29-212ENST00000529040 PXDNQ92626 1479 aa17.58■□□□□ 0.41
TRIM29-212ENST00000529040 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.4
TRIM29-212ENST00000529040 MYOM2P54296 1465 aa17.57■□□□□ 0.4
TRIM29-212ENST00000529040 ATAD2Q6PL18 1390 aa17.57■□□□□ 0.4
TRIM29-212ENST00000529040 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
TRIM29-212ENST00000529040 KIF1AQ12756 1690 aa17.57■□□□□ 0.4
TRIM29-212ENST00000529040 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.56■□□□□ 0.4
TRIM29-212ENST00000529040 FOXD1Q16676 465 aa17.56■□□□□ 0.4
TRIM29-212ENST00000529040 ESCO1Q5FWF5 840 aa17.56■□□□□ 0.4
TRIM29-212ENST00000529040 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
TRIM29-212ENST00000529040 TECPR2O15040 1411 aa17.55■□□□□ 0.4
TRIM29-212ENST00000529040 ATRNO75882 1429 aa17.55■□□□□ 0.4
TRIM29-212ENST00000529040 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
TRIM29-212ENST00000529040 RGPD8O14715 1765 aaPredicted RBP17.54■□□□□ 0.4
TRIM29-212ENST00000529040 SPATA31E1Q6ZUB1 1445 aa17.54■□□□□ 0.4
TRIM29-212ENST00000529040 XPCQ01831 940 aaPredicted RBP17.53■□□□□ 0.4
TRIM29-212ENST00000529040 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
TRIM29-212ENST00000529040 STK26Q9P289 416 aa17.53■□□□□ 0.4
TRIM29-212ENST00000529040 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
TRIM29-212ENST00000529040 RGL3Q3MIN7 710 aa17.52■□□□□ 0.4
TRIM29-212ENST00000529040 LRPPRCP42704 1394 aaKnown RBP17.52■□□□□ 0.39
TRIM29-212ENST00000529040 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
TRIM29-212ENST00000529040 FOXO3O43524 673 aa17.51■□□□□ 0.39
TRIM29-212ENST00000529040 PIK3C2GO75747 1445 aa17.51■□□□□ 0.39
TRIM29-212ENST00000529040 WAPLQ7Z5K2 1190 aa17.5■□□□□ 0.39
TRIM29-212ENST00000529040 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
TRIM29-212ENST00000529040 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
TRIM29-212ENST00000529040 PLEKHH1Q9ULM0 1364 aa17.49■□□□□ 0.39
TRIM29-212ENST00000529040 ABCA3Q99758 1704 aa17.48■□□□□ 0.39
TRIM29-212ENST00000529040 ABCC11Q96J66 1382 aa17.48■□□□□ 0.39
TRIM29-212ENST00000529040 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
TRIM29-212ENST00000529040 BRWD3Q6RI45 1802 aa17.47■□□□□ 0.39
TRIM29-212ENST00000529040 TMEM132EQ6IEE7 984 aa17.47■□□□□ 0.39
TRIM29-212ENST00000529040 PLCH1Q4KWH8 1693 aa17.46■□□□□ 0.39
TRIM29-212ENST00000529040 GLI3P10071 1580 aa17.45■□□□□ 0.38
TRIM29-212ENST00000529040 MPHOSPH9Q99550 1183 aa17.45■□□□□ 0.38
TRIM29-212ENST00000529040 NWD2Q9ULI1 1742 aa17.44■□□□□ 0.38
TRIM29-212ENST00000529040 SLIT2O94813 1529 aa17.43■□□□□ 0.38
TRIM29-212ENST00000529040 GJD4Q96KN9 370 aaPredicted RBP17.43■□□□□ 0.38
TRIM29-212ENST00000529040 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
TRIM29-212ENST00000529040 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
TRIM29-212ENST00000529040 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
TRIM29-212ENST00000529040 NRXN1Q9ULB1 1477 aa17.41■□□□□ 0.38
TRIM29-212ENST00000529040 HAP1P54257 671 aaPredicted RBP17.4■□□□□ 0.38
TRIM29-212ENST00000529040 UNC5CLQ8IV45 518 aa17.4■□□□□ 0.38
TRIM29-212ENST00000529040 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
TRIM29-212ENST00000529040 KRT28Q7Z3Y7 464 aa17.39■□□□□ 0.37
TRIM29-212ENST00000529040 CCDC125Q86Z20 511 aa17.38■□□□□ 0.37
TRIM29-212ENST00000529040 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
TRIM29-212ENST00000529040 ADGRB2O60241 1585 aa17.37■□□□□ 0.37
TRIM29-212ENST00000529040 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
TRIM29-212ENST00000529040 PHF8Q9UPP1 1060 aa17.37■□□□□ 0.37
TRIM29-212ENST00000529040 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
TRIM29-212ENST00000529040 EP400Q96L91 3159 aa17.36■□□□□ 0.37
TRIM29-212ENST00000529040 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
TRIM29-212ENST00000529040 SAFB2Q14151 953 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRIM29-212ENST00000529040 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
TRIM29-212ENST00000529040 NRAPQ86VF7 1730 aa17.35■□□□□ 0.37
TRIM29-212ENST00000529040 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
TRIM29-212ENST00000529040 PSME1Q06323 249 aa17.35■□□□□ 0.37
TRIM29-212ENST00000529040 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
TRIM29-212ENST00000529040 BLMP54132 1417 aaPredicted RBP17.35■□□□□ 0.37
TRIM29-212ENST00000529040 SBNO1A3KN83 1393 aa17.34■□□□□ 0.37
TRIM29-212ENST00000529040 ARHGEF10O15013 1369 aa17.34■□□□□ 0.37
TRIM29-212ENST00000529040 LMOD2Q6P5Q4 547 aa17.34■□□□□ 0.37
TRIM29-212ENST00000529040 CABLES1Q8TDN4 633 aa17.34■□□□□ 0.37
TRIM29-212ENST00000529040 PRAM1Q96QH2 718 aa17.34■□□□□ 0.37
TRIM29-212ENST00000529040 ALS2Q96Q42 1657 aa17.33■□□□□ 0.37
TRIM29-212ENST00000529040 ANKARQ7Z5J8 1434 aa17.33■□□□□ 0.36
TRIM29-212ENST00000529040 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
TRIM29-212ENST00000529040 CCDC9Q9Y3X0 531 aaKnown RBP17.32■□□□□ 0.36
TRIM29-212ENST00000529040 ADGRB1O14514 1584 aa17.32■□□□□ 0.36
TRIM29-212ENST00000529040 ITSN1Q15811 1721 aa17.31■□□□□ 0.36
TRIM29-212ENST00000529040 POGKQ9P215 609 aa17.31■□□□□ 0.36
TRIM29-212ENST00000529040 COL14A1Q05707 1796 aaKnown RBP17.3■□□□□ 0.36
TRIM29-212ENST00000529040 VPS72Q15906 364 aa17.3■□□□□ 0.36
TRIM29-212ENST00000529040 SEPT12Q8IYM1 358 aa17.3■□□□□ 0.36
TRIM29-212ENST00000529040 CRYBG1Q9Y4K1 1723 aa17.3■□□□□ 0.36
TRIM29-212ENST00000529040 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
TRIM29-212ENST00000529040 PMFBP1Q8TBY8 1022 aa17.29■□□□□ 0.36
TRIM29-212ENST00000529040 TULP4Q9NRJ4 1543 aa17.28■□□□□ 0.36
TRIM29-212ENST00000529040 ARHGEF28Q8N1W1 1705 aaKnown RBP17.28■□□□□ 0.36
TRIM29-212ENST00000529040 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
TRIM29-212ENST00000529040 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.35
TRIM29-212ENST00000529040 RAB3GAP2Q9H2M9 1393 aa17.27■□□□□ 0.35
TRIM29-212ENST00000529040 A0A0G2JS52 829 aa17.26■□□□□ 0.35
TRIM29-212ENST00000529040 MYT1Q01538 1121 aa17.26■□□□□ 0.35
TRIM29-212ENST00000529040 DEFB132Q7Z7B7 95 aa17.26■□□□□ 0.35
TRIM29-212ENST00000529040 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
TRIM29-212ENST00000529040 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
TRIM29-212ENST00000529040 TRAK1Q9UPV9 953 aa17.25■□□□□ 0.35
TRIM29-212ENST00000529040 GPRASP1Q5JY77 1395 aa17.25■□□□□ 0.35
TRIM29-212ENST00000529040 LRP5O75197 1615 aa17.25■□□□□ 0.35
TRIM29-212ENST00000529040 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
TRIM29-212ENST00000529040 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
TRIM29-212ENST00000529040 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms