RNA–Protein interactions for RNA: ENST00000529008.5

SSR2-215, Transcript of signal sequence receptor subunit 2, human

TSL 5 BASIC

Gene SSR2, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR2-215	ENST00000529008	ESCO1	Q5FWF5	840 aa		12.13	□□□□□ -0.47
SSR2-215	ENST00000529008	USP21	Q9UK80	565 aa		12.13	□□□□□ -0.47
SSR2-215	ENST00000529008	KIF1B	O60333	1816 aa		12.13	□□□□□ -0.47
SSR2-215	ENST00000529008	CDC42BPG	Q6DT37	1551 aa		12.13	□□□□□ -0.47
SSR2-215	ENST00000529008	ADGRF5	Q8IZF2	1346 aa		12.12	□□□□□ -0.47
SSR2-215	ENST00000529008	CCDC144A	A2RUR9	1427 aa		12.12	□□□□□ -0.47
SSR2-215	ENST00000529008	LAMC1	P11047	1609 aa		12.12	□□□□□ -0.47
SSR2-215	ENST00000529008	XPC	Q01831	940 aa	Predicted RBP	12.12	□□□□□ -0.47
SSR2-215	ENST00000529008	STK26	Q9P289	416 aa		12.12	□□□□□ -0.47
SSR2-215	ENST00000529008	NPHP3	Q7Z494	1330 aa		12.11	□□□□□ -0.47
SSR2-215	ENST00000529008	MYOM2	P54296	1465 aa		12.11	□□□□□ -0.47
SSR2-215	ENST00000529008	ATAD2	Q6PL18	1390 aa		12.11	□□□□□ -0.47
SSR2-215	ENST00000529008	NUTM2F	A1L443	756 aa		12.11	□□□□□ -0.47
SSR2-215	ENST00000529008	RGL3	Q3MIN7	710 aa		12.11	□□□□□ -0.47
SSR2-215	ENST00000529008	TRPC5	Q9UL62	973 aa	Predicted RBP	12.11	□□□□□ -0.47
SSR2-215	ENST00000529008	PXDN	Q92626	1479 aa		12.1	□□□□□ -0.47
SSR2-215	ENST00000529008	FOXO3	O43524	673 aa		12.1	□□□□□ -0.47
SSR2-215	ENST00000529008	PLEKHH1	Q9ULM0	1364 aa		12.09	□□□□□ -0.47
SSR2-215	ENST00000529008	WAPL	Q7Z5K2	1190 aa		12.09	□□□□□ -0.47
SSR2-215	ENST00000529008	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.09	□□□□□ -0.47
SSR2-215	ENST00000529008	TECPR2	O15040	1411 aa		12.09	□□□□□ -0.47
SSR2-215	ENST00000529008	ATRN	O75882	1429 aa		12.09	□□□□□ -0.47
SSR2-215	ENST00000529008	SPATA31E1	Q6ZUB1	1445 aa		12.09	□□□□□ -0.47
SSR2-215	ENST00000529008	LRPPRC	P42704	1394 aa	Known RBP	12.08	□□□□□ -0.48
SSR2-215	ENST00000529008	PPL	O60437	1756 aa		12.08	□□□□□ -0.48
SSR2-215	ENST00000529008	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.08	□□□□□ -0.48
SSR2-215	ENST00000529008	ANKRD30B	Q9BXX2	1392 aa		12.07	□□□□□ -0.48
SSR2-215	ENST00000529008	PIK3C2G	O75747	1445 aa		12.07	□□□□□ -0.48
SSR2-215	ENST00000529008	TMEM132E	Q6IEE7	984 aa		12.07	□□□□□ -0.48
SSR2-215	ENST00000529008	BCL9L	Q86UU0	1499 aa		12.06	□□□□□ -0.48
SSR2-215	ENST00000529008	MPHOSPH9	Q99550	1183 aa		12.05	□□□□□ -0.48
SSR2-215	ENST00000529008	EP400	Q96L91	3159 aa		12.05	□□□□□ -0.48
SSR2-215	ENST00000529008	ABCC11	Q96J66	1382 aa		12.05	□□□□□ -0.48
SSR2-215	ENST00000529008	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.04	□□□□□ -0.48
SSR2-215	ENST00000529008	PLEKHG5	O94827	1062 aa		12.03	□□□□□ -0.48
SSR2-215	ENST00000529008	GJD4	Q96KN9	370 aa	Predicted RBP	12.02	□□□□□ -0.49
SSR2-215	ENST00000529008	SPATA31A3	Q5VYP0	1347 aa		12.02	□□□□□ -0.49
SSR2-215	ENST00000529008	HAP1	P54257	671 aa	Predicted RBP	12.01	□□□□□ -0.49
SSR2-215	ENST00000529008	TNS3	Q68CZ2	1445 aa		12.01	□□□□□ -0.49
SSR2-215	ENST00000529008	RALGAPB	Q86X10	1494 aa		12.01	□□□□□ -0.49
SSR2-215	ENST00000529008	KNDC1	Q76NI1	1749 aa		12	□□□□□ -0.49
SSR2-215	ENST00000529008	SAFB2	Q14151	953 aa	Known RBP eCLIP	12	□□□□□ -0.49
SSR2-215	ENST00000529008	KRT28	Q7Z3Y7	464 aa		12	□□□□□ -0.49
SSR2-215	ENST00000529008	UNC5CL	Q8IV45	518 aa		12	□□□□□ -0.49
SSR2-215	ENST00000529008	SLIT2	O94813	1529 aa		12	□□□□□ -0.49
SSR2-215	ENST00000529008	IFT172	Q9UG01	1749 aa		12	□□□□□ -0.49
SSR2-215	ENST00000529008	CFAP70	Q5T0N1	1121 aa		11.99	□□□□□ -0.49
SSR2-215	ENST00000529008	PRAM1	Q96QH2	718 aa		11.99	□□□□□ -0.49
SSR2-215	ENST00000529008	ZRANB1	Q9UGI0	708 aa		11.99	□□□□□ -0.49
SSR2-215	ENST00000529008	PHF8	Q9UPP1	1060 aa		11.99	□□□□□ -0.49
SSR2-215	ENST00000529008	KIF1A	Q12756	1690 aa		11.99	□□□□□ -0.49
SSR2-215	ENST00000529008	FMN2	Q9NZ56	1722 aa		11.99	□□□□□ -0.49
SSR2-215	ENST00000529008	USP32	Q8NFA0	1604 aa		11.98	□□□□□ -0.49
SSR2-215	ENST00000529008	NRXN1	Q9ULB1	1477 aa		11.98	□□□□□ -0.49
SSR2-215	ENST00000529008	LMOD2	Q6P5Q4	547 aa		11.98	□□□□□ -0.49
SSR2-215	ENST00000529008	CABLES1	Q8TDN4	633 aa		11.98	□□□□□ -0.49
SSR2-215	ENST00000529008	C14orf93	Q9H972	538 aa	Known RBP	11.98	□□□□□ -0.49
SSR2-215	ENST00000529008	GLI3	P10071	1580 aa		11.97	□□□□□ -0.49
SSR2-215	ENST00000529008	DHX57	Q6P158	1386 aa	Known RBP	11.97	□□□□□ -0.49
SSR2-215	ENST00000529008	PSME1	Q06323	249 aa		11.96	□□□□□ -0.49
SSR2-215	ENST00000529008	CCDC125	Q86Z20	511 aa		11.96	□□□□□ -0.49
SSR2-215	ENST00000529008	SIRT1	Q96EB6	747 aa		11.96	□□□□□ -0.49
SSR2-215	ENST00000529008	CCDC9	Q9Y3X0	531 aa	Known RBP	11.96	□□□□□ -0.49
SSR2-215	ENST00000529008	BLM	P54132	1417 aa	Predicted RBP	11.95	□□□□□ -0.5
SSR2-215	ENST00000529008	ARHGEF10	O15013	1369 aa		11.95	□□□□□ -0.5
SSR2-215	ENST00000529008	PMFBP1	Q8TBY8	1022 aa		11.95	□□□□□ -0.5
SSR2-215	ENST00000529008	POGK	Q9P215	609 aa		11.95	□□□□□ -0.5
SSR2-215	ENST00000529008	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.94	□□□□□ -0.5
SSR2-215	ENST00000529008	SBNO1	A3KN83	1393 aa		11.94	□□□□□ -0.5
SSR2-215	ENST00000529008	SEPT12	Q8IYM1	358 aa		11.94	□□□□□ -0.5
SSR2-215	ENST00000529008	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.94	□□□□□ -0.5
SSR2-215	ENST00000529008	MARF1	Q9Y4F3	1742 aa	Known RBP	11.94	□□□□□ -0.5
SSR2-215	ENST00000529008	ANKAR	Q7Z5J8	1434 aa		11.94	□□□□□ -0.5
SSR2-215	ENST00000529008		A0A0G2JS52	829 aa		11.93	□□□□□ -0.5
SSR2-215	ENST00000529008	MYT1	Q01538	1121 aa		11.93	□□□□□ -0.5
SSR2-215	ENST00000529008	VPS72	Q15906	364 aa		11.93	□□□□□ -0.5
SSR2-215	ENST00000529008	DEFB132	Q7Z7B7	95 aa		11.93	□□□□□ -0.5
SSR2-215	ENST00000529008	CCER1	Q8TC90	406 aa	Predicted RBP	11.93	□□□□□ -0.5
SSR2-215	ENST00000529008	RAB3GAP2	Q9H2M9	1393 aa		11.92	□□□□□ -0.5
SSR2-215	ENST00000529008	DLC1	Q96QB1	1528 aa		11.92	□□□□□ -0.5
SSR2-215	ENST00000529008	SF3B2	Q13435	895 aa	Known RBP	11.92	□□□□□ -0.5
SSR2-215	ENST00000529008	TRAK1	Q9UPV9	953 aa		11.92	□□□□□ -0.5
SSR2-215	ENST00000529008	ADGRB1	O14514	1584 aa		11.92	□□□□□ -0.5
SSR2-215	ENST00000529008	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.91	□□□□□ -0.5
SSR2-215	ENST00000529008	ADGRB2	O60241	1585 aa		11.91	□□□□□ -0.5
SSR2-215	ENST00000529008	ACIN1	Q9UKV3	1341 aa	Known RBP	11.9	□□□□□ -0.5
SSR2-215	ENST00000529008	FAM83G	A6ND36	823 aa		11.9	□□□□□ -0.5
SSR2-215	ENST00000529008	KRT27	Q7Z3Y8	459 aa		11.9	□□□□□ -0.5
SSR2-215	ENST00000529008	PLCH1	Q4KWH8	1693 aa		11.9	□□□□□ -0.5
SSR2-215	ENST00000529008	GPRASP1	Q5JY77	1395 aa		11.9	□□□□□ -0.5
SSR2-215	ENST00000529008	PRR36	Q9H6K5	1346 aa		11.89	□□□□□ -0.51
SSR2-215	ENST00000529008	FAM98C	Q17RN3	349 aa	Known RBP	11.89	□□□□□ -0.51
SSR2-215	ENST00000529008	KDM2A	Q9Y2K7	1162 aa		11.89	□□□□□ -0.51
SSR2-215	ENST00000529008	EIF3A	Q14152	1382 aa	Known RBP	11.89	□□□□□ -0.51
SSR2-215	ENST00000529008	ABCA3	Q99758	1704 aa		11.89	□□□□□ -0.51
SSR2-215	ENST00000529008	TULP4	Q9NRJ4	1543 aa		11.88	□□□□□ -0.51
SSR2-215	ENST00000529008	BTG4	Q9NY30	223 aa		11.88	□□□□□ -0.51
SSR2-215	ENST00000529008	ONECUT3	O60422	494 aa	Predicted RBP	11.87	□□□□□ -0.51
SSR2-215	ENST00000529008	PAK3	O75914	559 aa	Predicted RBP	11.87	□□□□□ -0.51
SSR2-215	ENST00000529008	DCAF11	Q8TEB1	546 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms