RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 ORAI2Q96SN7 254 aa21.3■■□□□ 1
PACS1-207ENST00000528935 SHPRHQ149N8 1683 aa21.3■■□□□ 1
PACS1-207ENST00000528935 DHX57Q6P158 1386 aaKnown RBP21.29■■□□□ 1
PACS1-207ENST00000528935 PCGF6Q9BYE7 350 aa21.29■■□□□ 1
PACS1-207ENST00000528935 CDC42BPGQ6DT37 1551 aa21.28■■□□□ 1
PACS1-207ENST00000528935 KNDC1Q76NI1 1749 aa21.28■■□□□ 1
PACS1-207ENST00000528935 PLEKHH1Q9ULM0 1364 aa21.27■■□□□ 1
PACS1-207ENST00000528935 LRP6O75581 1613 aa21.27■■□□□ 1
PACS1-207ENST00000528935 LAMC1P11047 1609 aa21.27■■□□□ 1
PACS1-207ENST00000528935 POTEAQ6S8J7 498 aa21.27■■□□□ 1
PACS1-207ENST00000528935 DCAF11Q8TEB1 546 aa21.27■■□□□ 1
PACS1-207ENST00000528935 STAC3Q96MF2 364 aa21.27■■□□□ 1
PACS1-207ENST00000528935 MEX3CQ5U5Q3 659 aaKnown RBP21.26■□□□□ 0.99
PACS1-207ENST00000528935 KDM2AQ9Y2K7 1162 aa21.26■□□□□ 0.99
PACS1-207ENST00000528935 ESCO1Q5FWF5 840 aa21.24■□□□□ 0.99
PACS1-207ENST00000528935 SOS2Q07890 1332 aaPredicted RBP21.24■□□□□ 0.99
PACS1-207ENST00000528935 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
PACS1-207ENST00000528935 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
PACS1-207ENST00000528935 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
PACS1-207ENST00000528935 PNPLA6Q8IY17 1366 aa21.22■□□□□ 0.99
PACS1-207ENST00000528935 NUTM2FA1L443 756 aa21.2■□□□□ 0.98
PACS1-207ENST00000528935 PRAM1Q96QH2 718 aa21.2■□□□□ 0.98
PACS1-207ENST00000528935 ZNF772Q68DY9 489 aaPredicted RBP21.19■□□□□ 0.98
PACS1-207ENST00000528935 NPHP3Q7Z494 1330 aa21.19■□□□□ 0.98
PACS1-207ENST00000528935 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
PACS1-207ENST00000528935 POGKQ9P215 609 aa21.18■□□□□ 0.98
PACS1-207ENST00000528935 DLC1Q96QB1 1528 aa21.18■□□□□ 0.98
PACS1-207ENST00000528935 FOXO3O43524 673 aa21.17■□□□□ 0.98
PACS1-207ENST00000528935 SAFB2Q14151 953 aaKnown RBP eCLIP21.16■□□□□ 0.98
PACS1-207ENST00000528935 FMN2Q9NZ56 1722 aa21.15■□□□□ 0.98
PACS1-207ENST00000528935 TRAK1Q9UPV9 953 aa21.15■□□□□ 0.98
PACS1-207ENST00000528935 PXDNQ92626 1479 aa21.13■□□□□ 0.97
PACS1-207ENST00000528935 AFF2P51816 1311 aa21.11■□□□□ 0.97
PACS1-207ENST00000528935 XPCQ01831 940 aaPredicted RBP21.11■□□□□ 0.97
PACS1-207ENST00000528935 C8orf37Q96NL8 207 aa21.11■□□□□ 0.97
PACS1-207ENST00000528935 ADAMTS2O95450 1211 aa21.09■□□□□ 0.97
PACS1-207ENST00000528935 PHF8Q9UPP1 1060 aa21.09■□□□□ 0.97
PACS1-207ENST00000528935 KIF1AQ12756 1690 aa21.08■□□□□ 0.96
PACS1-207ENST00000528935 KRT28Q7Z3Y7 464 aa21.07■□□□□ 0.96
PACS1-207ENST00000528935 NGLY1Q96IV0 654 aa21.07■□□□□ 0.96
PACS1-207ENST00000528935 COL22A1Q8NFW1 1626 aaPredicted RBP21.07■□□□□ 0.96
PACS1-207ENST00000528935 MINK1Q8N4C8 1332 aaPredicted RBP21.06■□□□□ 0.96
PACS1-207ENST00000528935 ADGRB2O60241 1585 aa21.06■□□□□ 0.96
PACS1-207ENST00000528935 ANKARQ7Z5J8 1434 aa21.06■□□□□ 0.96
PACS1-207ENST00000528935 RXRBP28702 533 aa21.06■□□□□ 0.96
PACS1-207ENST00000528935 HIRIP3Q9BW71 556 aaPredicted RBP21.06■□□□□ 0.96
PACS1-207ENST00000528935 SPATA31A3Q5VYP0 1347 aa21.04■□□□□ 0.96
PACS1-207ENST00000528935 PSME1Q06323 249 aa21.04■□□□□ 0.96
PACS1-207ENST00000528935 RGPD8O14715 1765 aaPredicted RBP21.04■□□□□ 0.96
PACS1-207ENST00000528935 EIF3AQ14152 1382 aaKnown RBP21.03■□□□□ 0.96
PACS1-207ENST00000528935 WASLO00401 505 aaPredicted RBP21.03■□□□□ 0.96
PACS1-207ENST00000528935 QTRT2Q9H974 415 aaKnown RBP21.03■□□□□ 0.96
PACS1-207ENST00000528935 KIAA1210Q9ULL0 1709 aa21.01■□□□□ 0.95
PACS1-207ENST00000528935 USP32Q8NFA0 1604 aa21■□□□□ 0.95
PACS1-207ENST00000528935 NBPF1Q3BBV0 1214 aa21■□□□□ 0.95
PACS1-207ENST00000528935 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
PACS1-207ENST00000528935 PMFBP1Q8TBY8 1022 aa21■□□□□ 0.95
PACS1-207ENST00000528935 L3MBTL2Q969R5 705 aa21■□□□□ 0.95
PACS1-207ENST00000528935 SIN3AQ96ST3 1273 aa21■□□□□ 0.95
PACS1-207ENST00000528935 ARHGEF28Q8N1W1 1705 aaKnown RBP20.99■□□□□ 0.95
PACS1-207ENST00000528935 USP21Q9UK80 565 aa20.99■□□□□ 0.95
PACS1-207ENST00000528935 PRR36Q9H6K5 1346 aa20.99■□□□□ 0.95
PACS1-207ENST00000528935 SBNO1A3KN83 1393 aa20.98■□□□□ 0.95
PACS1-207ENST00000528935 RBM6P78332 1123 aaKnown RBP20.98■□□□□ 0.95
PACS1-207ENST00000528935 CDK12Q9NYV4 1490 aaPredicted RBP20.98■□□□□ 0.95
PACS1-207ENST00000528935 TULP4Q9NRJ4 1543 aa20.98■□□□□ 0.95
PACS1-207ENST00000528935 TNS3Q68CZ2 1445 aa20.97■□□□□ 0.95
PACS1-207ENST00000528935 NEUROD1Q13562 356 aa20.96■□□□□ 0.95
PACS1-207ENST00000528935 TRPC5Q9UL62 973 aaPredicted RBP20.95■□□□□ 0.94
PACS1-207ENST00000528935 ARHGEF10O15013 1369 aa20.94■□□□□ 0.94
PACS1-207ENST00000528935 GPRASP1Q5JY77 1395 aa20.94■□□□□ 0.94
PACS1-207ENST00000528935 LMOD2Q6P5Q4 547 aa20.93■□□□□ 0.94
PACS1-207ENST00000528935 NUDT16Q96DE0 195 aaKnown RBP20.93■□□□□ 0.94
PACS1-207ENST00000528935 CDK19Q9BWU1 502 aa20.93■□□□□ 0.94
PACS1-207ENST00000528935 NGDNQ8NEJ9 315 aaKnown RBP20.92■□□□□ 0.94
PACS1-207ENST00000528935 HAP1P54257 671 aaPredicted RBP20.91■□□□□ 0.94
PACS1-207ENST00000528935 MARF1Q9Y4F3 1742 aaKnown RBP20.91■□□□□ 0.94
PACS1-207ENST00000528935 ATP7BP35670 1465 aa20.9■□□□□ 0.94
PACS1-207ENST00000528935 BCL9LQ86UU0 1499 aa20.9■□□□□ 0.94
PACS1-207ENST00000528935 ATRNO75882 1429 aa20.9■□□□□ 0.94
PACS1-207ENST00000528935 CABLES1Q8TDN4 633 aa20.9■□□□□ 0.94
PACS1-207ENST00000528935 CENPJQ9HC77 1338 aaPredicted RBP20.89■□□□□ 0.93
PACS1-207ENST00000528935 RGS12O14924 1447 aa20.88■□□□□ 0.93
PACS1-207ENST00000528935 PLEKHG5O94827 1062 aa20.88■□□□□ 0.93
PACS1-207ENST00000528935 CCDC61Q9Y6R9 512 aa20.87■□□□□ 0.93
PACS1-207ENST00000528935 TRPM3Q9HCF6 1732 aaPredicted RBP20.87■□□□□ 0.93
PACS1-207ENST00000528935 UNC5CLQ8IV45 518 aa20.86■□□□□ 0.93
PACS1-207ENST00000528935 UPF1Q92900 1129 aaKnown RBP eCLIP20.86■□□□□ 0.93
PACS1-207ENST00000528935 SLIT2O94813 1529 aa20.86■□□□□ 0.93
PACS1-207ENST00000528935 ITSN1Q15811 1721 aa20.85■□□□□ 0.93
PACS1-207ENST00000528935 PLEKHG3A1L390 1219 aa20.84■□□□□ 0.93
PACS1-207ENST00000528935 PAK3O75914 559 aaPredicted RBP20.84■□□□□ 0.93
PACS1-207ENST00000528935 GJD4Q96KN9 370 aaPredicted RBP20.84■□□□□ 0.93
PACS1-207ENST00000528935 TRPM1Q7Z4N2 1603 aa20.83■□□□□ 0.93
PACS1-207ENST00000528935 SRPK2P78362 688 aaKnown RBP20.83■□□□□ 0.93
PACS1-207ENST00000528935 ROCK2O75116 1388 aaKnown RBP20.83■□□□□ 0.92
PACS1-207ENST00000528935 ALS2Q96Q42 1657 aa20.83■□□□□ 0.92
PACS1-207ENST00000528935 POLR3AO14802 1390 aaPredicted RBP20.82■□□□□ 0.92
PACS1-207ENST00000528935 ACEP12821 1306 aa20.81■□□□□ 0.92
PACS1-207ENST00000528935 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms