RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 NUTM2FA1L443 756 aa18.83■□□□□ 0.6
TRIM3-207ENST00000528932 XPCQ01831 940 aaPredicted RBP18.83■□□□□ 0.6
TRIM3-207ENST00000528932 ESCO1Q5FWF5 840 aa18.83■□□□□ 0.6
TRIM3-207ENST00000528932 USP21Q9UK80 565 aa18.82■□□□□ 0.6
TRIM3-207ENST00000528932 PRAG1Q86YV5 1406 aa18.82■□□□□ 0.6
TRIM3-207ENST00000528932 IFT172Q9UG01 1749 aa18.8■□□□□ 0.6
TRIM3-207ENST00000528932 WAPLQ7Z5K2 1190 aa18.8■□□□□ 0.6
TRIM3-207ENST00000528932 CDC42BPGQ6DT37 1551 aa18.8■□□□□ 0.6
TRIM3-207ENST00000528932 COL22A1Q8NFW1 1626 aaPredicted RBP18.79■□□□□ 0.6
TRIM3-207ENST00000528932 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
TRIM3-207ENST00000528932 TMEM132EQ6IEE7 984 aa18.78■□□□□ 0.6
TRIM3-207ENST00000528932 MARF1Q9Y4F3 1742 aaKnown RBP18.77■□□□□ 0.6
TRIM3-207ENST00000528932 FOXO3O43524 673 aa18.77■□□□□ 0.6
TRIM3-207ENST00000528932 PXDNQ92626 1479 aa18.77■□□□□ 0.59
TRIM3-207ENST00000528932 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
TRIM3-207ENST00000528932 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
TRIM3-207ENST00000528932 PLEKHH1Q9ULM0 1364 aa18.76■□□□□ 0.59
TRIM3-207ENST00000528932 MPHOSPH9Q99550 1183 aa18.75■□□□□ 0.59
TRIM3-207ENST00000528932 SPATA31E1Q6ZUB1 1445 aa18.74■□□□□ 0.59
TRIM3-207ENST00000528932 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
TRIM3-207ENST00000528932 MYOM2P54296 1465 aa18.74■□□□□ 0.59
TRIM3-207ENST00000528932 FNBP4Q8N3X1 1017 aaPredicted RBP18.74■□□□□ 0.59
TRIM3-207ENST00000528932 ATRNO75882 1429 aa18.74■□□□□ 0.59
TRIM3-207ENST00000528932 LRPPRCP42704 1394 aaKnown RBP18.73■□□□□ 0.59
TRIM3-207ENST00000528932 RGPD8O14715 1765 aaPredicted RBP18.73■□□□□ 0.59
TRIM3-207ENST00000528932 FMN2Q9NZ56 1722 aa18.72■□□□□ 0.59
TRIM3-207ENST00000528932 ATAD2Q6PL18 1390 aa18.72■□□□□ 0.59
TRIM3-207ENST00000528932 TECPR2O15040 1411 aa18.72■□□□□ 0.59
TRIM3-207ENST00000528932 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
TRIM3-207ENST00000528932 PLEKHG5O94827 1062 aa18.71■□□□□ 0.59
TRIM3-207ENST00000528932 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
TRIM3-207ENST00000528932 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
TRIM3-207ENST00000528932 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
TRIM3-207ENST00000528932 YTHDC2Q9H6S0 1430 aaKnown RBP18.68■□□□□ 0.58
TRIM3-207ENST00000528932 KIF1AQ12756 1690 aa18.67■□□□□ 0.58
TRIM3-207ENST00000528932 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRIM3-207ENST00000528932 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
TRIM3-207ENST00000528932 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.64■□□□□ 0.57
TRIM3-207ENST00000528932 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
TRIM3-207ENST00000528932 GJD4Q96KN9 370 aaPredicted RBP18.64■□□□□ 0.57
TRIM3-207ENST00000528932 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
TRIM3-207ENST00000528932 USP32Q8NFA0 1604 aa18.63■□□□□ 0.57
TRIM3-207ENST00000528932 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
TRIM3-207ENST00000528932 CABLES1Q8TDN4 633 aa18.62■□□□□ 0.57
TRIM3-207ENST00000528932 C14orf93Q9H972 538 aaKnown RBP18.62■□□□□ 0.57
TRIM3-207ENST00000528932 BRWD3Q6RI45 1802 aa18.62■□□□□ 0.57
TRIM3-207ENST00000528932 GLI3P10071 1580 aa18.61■□□□□ 0.57
TRIM3-207ENST00000528932 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
TRIM3-207ENST00000528932 UNC5CLQ8IV45 518 aa18.61■□□□□ 0.57
TRIM3-207ENST00000528932 PHF8Q9UPP1 1060 aa18.61■□□□□ 0.57
TRIM3-207ENST00000528932 RALGAPBQ86X10 1494 aa18.6■□□□□ 0.57
TRIM3-207ENST00000528932 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
TRIM3-207ENST00000528932 PRAM1Q96QH2 718 aa18.6■□□□□ 0.57
TRIM3-207ENST00000528932 SLIT2O94813 1529 aa18.59■□□□□ 0.57
TRIM3-207ENST00000528932 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
TRIM3-207ENST00000528932 TNS3Q68CZ2 1445 aa18.58■□□□□ 0.57
TRIM3-207ENST00000528932 ABCA3Q99758 1704 aa18.58■□□□□ 0.57
TRIM3-207ENST00000528932 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.56
TRIM3-207ENST00000528932 PMFBP1Q8TBY8 1022 aa18.57■□□□□ 0.56
TRIM3-207ENST00000528932 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
TRIM3-207ENST00000528932 ZRANB1Q9UGI0 708 aa18.57■□□□□ 0.56
TRIM3-207ENST00000528932 EP400Q96L91 3159 aa18.56■□□□□ 0.56
TRIM3-207ENST00000528932 PSME1Q06323 249 aa18.56■□□□□ 0.56
TRIM3-207ENST00000528932 POGKQ9P215 609 aa18.56■□□□□ 0.56
TRIM3-207ENST00000528932 CCDC9Q9Y3X0 531 aaKnown RBP18.56■□□□□ 0.56
TRIM3-207ENST00000528932 HIRIP3Q9BW71 556 aaPredicted RBP18.54■□□□□ 0.56
TRIM3-207ENST00000528932 NWD2Q9ULI1 1742 aa18.53■□□□□ 0.56
TRIM3-207ENST00000528932 RAB3GAP2Q9H2M9 1393 aa18.53■□□□□ 0.56
TRIM3-207ENST00000528932 CCDC125Q86Z20 511 aa18.52■□□□□ 0.56
TRIM3-207ENST00000528932 SEPT12Q8IYM1 358 aa18.52■□□□□ 0.56
TRIM3-207ENST00000528932 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
TRIM3-207ENST00000528932 KDM2AQ9Y2K7 1162 aa18.52■□□□□ 0.56
TRIM3-207ENST00000528932 SBNO1A3KN83 1393 aa18.52■□□□□ 0.55
TRIM3-207ENST00000528932 DLC1Q96QB1 1528 aa18.51■□□□□ 0.55
TRIM3-207ENST00000528932 DEFB132Q7Z7B7 95 aa18.51■□□□□ 0.55
TRIM3-207ENST00000528932 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
TRIM3-207ENST00000528932 VPS72Q15906 364 aa18.5■□□□□ 0.55
TRIM3-207ENST00000528932 ADGRB1O14514 1584 aa18.5■□□□□ 0.55
TRIM3-207ENST00000528932 BLMP54132 1417 aaPredicted RBP18.49■□□□□ 0.55
TRIM3-207ENST00000528932 TRPM3Q9HCF6 1732 aaPredicted RBP18.49■□□□□ 0.55
TRIM3-207ENST00000528932 SRCAPQ6ZRS2 3230 aa18.49■□□□□ 0.55
TRIM3-207ENST00000528932 A0A0G2JS52 829 aa18.49■□□□□ 0.55
TRIM3-207ENST00000528932 FAM83GA6ND36 823 aa18.49■□□□□ 0.55
TRIM3-207ENST00000528932 MYT1Q01538 1121 aa18.49■□□□□ 0.55
TRIM3-207ENST00000528932 ARHGEF10O15013 1369 aa18.49■□□□□ 0.55
TRIM3-207ENST00000528932 ADGRB2O60241 1585 aa18.49■□□□□ 0.55
TRIM3-207ENST00000528932 ANKARQ7Z5J8 1434 aa18.49■□□□□ 0.55
TRIM3-207ENST00000528932 NRAPQ86VF7 1730 aa18.47■□□□□ 0.55
TRIM3-207ENST00000528932 DCAF11Q8TEB1 546 aa18.47■□□□□ 0.55
TRIM3-207ENST00000528932 PRR36Q9H6K5 1346 aa18.47■□□□□ 0.55
TRIM3-207ENST00000528932 SF3B2Q13435 895 aaKnown RBP18.46■□□□□ 0.55
TRIM3-207ENST00000528932 ALS2Q96Q42 1657 aa18.46■□□□□ 0.55
TRIM3-207ENST00000528932 ACIN1Q9UKV3 1341 aaKnown RBP18.46■□□□□ 0.55
TRIM3-207ENST00000528932 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
TRIM3-207ENST00000528932 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
TRIM3-207ENST00000528932 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
TRIM3-207ENST00000528932 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
TRIM3-207ENST00000528932 PAK3O75914 559 aaPredicted RBP18.43■□□□□ 0.54
TRIM3-207ENST00000528932 FAM98CQ17RN3 349 aaKnown RBP18.43■□□□□ 0.54
TRIM3-207ENST00000528932 COL14A1Q05707 1796 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms