RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 NUTM2EB1AL46 878 aaPredicted RBP27.22■■□□□ 1.95
YIF1A-212ENST00000528575 NUTM2AQ8IVF1 878 aaPredicted RBP27.22■■□□□ 1.95
YIF1A-212ENST00000528575 SOS2Q07890 1332 aaPredicted RBP27.21■■□□□ 1.95
YIF1A-212ENST00000528575 KNDC1Q76NI1 1749 aa27.21■■□□□ 1.95
YIF1A-212ENST00000528575 LRPPRCP42704 1394 aaKnown RBP27.2■■□□□ 1.94
YIF1A-212ENST00000528575 TMEM132EQ6IEE7 984 aa27.19■■□□□ 1.94
YIF1A-212ENST00000528575 WAPLQ7Z5K2 1190 aa27.19■■□□□ 1.94
YIF1A-212ENST00000528575 LRRC59Q96AG4 307 aaKnown RBP27.19■■□□□ 1.94
YIF1A-212ENST00000528575 MEX3CQ5U5Q3 659 aaKnown RBP27.18■■□□□ 1.94
YIF1A-212ENST00000528575 ABCC11Q96J66 1382 aa27.16■■□□□ 1.94
YIF1A-212ENST00000528575 AFF2P51816 1311 aa27.16■■□□□ 1.94
YIF1A-212ENST00000528575 ZNF772Q68DY9 489 aaPredicted RBP27.15■■□□□ 1.94
YIF1A-212ENST00000528575 PXDNQ92626 1479 aa27.14■■□□□ 1.94
YIF1A-212ENST00000528575 C14orf93Q9H972 538 aaKnown RBP27.14■■□□□ 1.94
YIF1A-212ENST00000528575 STK26Q9P289 416 aa27.14■■□□□ 1.94
YIF1A-212ENST00000528575 DHX57Q6P158 1386 aaKnown RBP27.13■■□□□ 1.93
YIF1A-212ENST00000528575 YTHDC2Q9H6S0 1430 aaKnown RBP27.12■■□□□ 1.93
YIF1A-212ENST00000528575 COL22A1Q8NFW1 1626 aaPredicted RBP27.12■■□□□ 1.93
YIF1A-212ENST00000528575 DCAF11Q8TEB1 546 aa27.11■■□□□ 1.93
YIF1A-212ENST00000528575 FMN2Q9NZ56 1722 aa27.1■■□□□ 1.93
YIF1A-212ENST00000528575 C8orf37Q96NL8 207 aa27.07■■□□□ 1.92
YIF1A-212ENST00000528575 CDK12Q9NYV4 1490 aaPredicted RBP27.06■■□□□ 1.92
YIF1A-212ENST00000528575 CFAP70Q5T0N1 1121 aa27.06■■□□□ 1.92
YIF1A-212ENST00000528575 SIRT1Q96EB6 747 aa27.06■■□□□ 1.92
YIF1A-212ENST00000528575 NUTM2FA1L443 756 aa27.05■■□□□ 1.92
YIF1A-212ENST00000528575 ADAMTS2O95450 1211 aa27.04■■□□□ 1.92
YIF1A-212ENST00000528575 RXRBP28702 533 aa27.04■■□□□ 1.92
YIF1A-212ENST00000528575 XPCQ01831 940 aaPredicted RBP27.04■■□□□ 1.92
YIF1A-212ENST00000528575 ESCO1Q5FWF5 840 aa27.04■■□□□ 1.92
YIF1A-212ENST00000528575 RGS12O14924 1447 aa27.04■■□□□ 1.92
YIF1A-212ENST00000528575 ADGRB1O14514 1584 aa27.04■■□□□ 1.92
YIF1A-212ENST00000528575 UPF1Q92900 1129 aaKnown RBP eCLIP27.03■■□□□ 1.92
YIF1A-212ENST00000528575 RGPD8O14715 1765 aaPredicted RBP27.02■■□□□ 1.92
YIF1A-212ENST00000528575 FOXO3O43524 673 aa27.02■■□□□ 1.92
YIF1A-212ENST00000528575 KDM2AQ9Y2K7 1162 aa27.01■■□□□ 1.91
YIF1A-212ENST00000528575 NPHP3Q7Z494 1330 aa26.98■■□□□ 1.91
YIF1A-212ENST00000528575 QTRT2Q9H974 415 aaKnown RBP26.98■■□□□ 1.91
YIF1A-212ENST00000528575 USP32Q8NFA0 1604 aa26.98■■□□□ 1.91
YIF1A-212ENST00000528575 DLC1Q96QB1 1528 aa26.97■■□□□ 1.91
YIF1A-212ENST00000528575 EP400Q96L91 3159 aa26.97■■□□□ 1.91
YIF1A-212ENST00000528575 FNBP4Q8N3X1 1017 aaPredicted RBP26.96■■□□□ 1.91
YIF1A-212ENST00000528575 KIAA1210Q9ULL0 1709 aa26.96■■□□□ 1.91
YIF1A-212ENST00000528575 MARF1Q9Y4F3 1742 aaKnown RBP26.95■■□□□ 1.9
YIF1A-212ENST00000528575 NGLY1Q96IV0 654 aa26.94■■□□□ 1.9
YIF1A-212ENST00000528575 BCL9LQ86UU0 1499 aa26.93■■□□□ 1.9
YIF1A-212ENST00000528575 KIF1AQ12756 1690 aa26.93■■□□□ 1.9
YIF1A-212ENST00000528575 ATRNO75882 1429 aa26.92■■□□□ 1.9
YIF1A-212ENST00000528575 RBM6P78332 1123 aaKnown RBP26.92■■□□□ 1.9
YIF1A-212ENST00000528575 PRAM1Q96QH2 718 aa26.92■■□□□ 1.9
YIF1A-212ENST00000528575 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
YIF1A-212ENST00000528575 L3MBTL2Q969R5 705 aa26.91■■□□□ 1.9
YIF1A-212ENST00000528575 ADGRB2O60241 1585 aa26.9■■□□□ 1.9
YIF1A-212ENST00000528575 SPATA31A3Q5VYP0 1347 aa26.9■■□□□ 1.9
YIF1A-212ENST00000528575 SAFB2Q14151 953 aaKnown RBP eCLIP26.89■■□□□ 1.9
YIF1A-212ENST00000528575 USP21Q9UK80 565 aa26.89■■□□□ 1.9
YIF1A-212ENST00000528575 CLSPNQ9HAW4 1339 aa26.89■■□□□ 1.89
YIF1A-212ENST00000528575 NEUROD1Q13562 356 aa26.88■■□□□ 1.89
YIF1A-212ENST00000528575 PCGF6Q9BYE7 350 aa26.88■■□□□ 1.89
YIF1A-212ENST00000528575 ABCA3Q99758 1704 aa26.83■■□□□ 1.89
YIF1A-212ENST00000528575 KRT28Q7Z3Y7 464 aa26.83■■□□□ 1.89
YIF1A-212ENST00000528575 PHF8Q9UPP1 1060 aa26.83■■□□□ 1.89
YIF1A-212ENST00000528575 PRR36Q9H6K5 1346 aa26.83■■□□□ 1.89
YIF1A-212ENST00000528575 TONSLQ96HA7 1378 aa26.83■■□□□ 1.88
YIF1A-212ENST00000528575 SRCAPQ6ZRS2 3230 aa26.82■■□□□ 1.88
YIF1A-212ENST00000528575 SLIT2O94813 1529 aa26.82■■□□□ 1.88
YIF1A-212ENST00000528575 POGKQ9P215 609 aa26.82■■□□□ 1.88
YIF1A-212ENST00000528575 TRPC5Q9UL62 973 aaPredicted RBP26.81■■□□□ 1.88
YIF1A-212ENST00000528575 TRAK1Q9UPV9 953 aa26.81■■□□□ 1.88
YIF1A-212ENST00000528575 TRPM3Q9HCF6 1732 aaPredicted RBP26.81■■□□□ 1.88
YIF1A-212ENST00000528575 TNS3Q68CZ2 1445 aa26.81■■□□□ 1.88
YIF1A-212ENST00000528575 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.8■■□□□ 1.88
YIF1A-212ENST00000528575 GLI3P10071 1580 aa26.8■■□□□ 1.88
YIF1A-212ENST00000528575 HIRIP3Q9BW71 556 aaPredicted RBP26.79■■□□□ 1.88
YIF1A-212ENST00000528575 ANKARQ7Z5J8 1434 aa26.79■■□□□ 1.88
YIF1A-212ENST00000528575 ARHGEF28Q8N1W1 1705 aaKnown RBP26.79■■□□□ 1.88
YIF1A-212ENST00000528575 CABLES1Q8TDN4 633 aa26.77■■□□□ 1.88
YIF1A-212ENST00000528575 SBNO1A3KN83 1393 aa26.76■■□□□ 1.87
YIF1A-212ENST00000528575 EIF3AQ14152 1382 aaKnown RBP26.76■■□□□ 1.87
YIF1A-212ENST00000528575 PMFBP1Q8TBY8 1022 aa26.75■■□□□ 1.87
YIF1A-212ENST00000528575 TIMELESSQ9UNS1 1208 aa26.75■■□□□ 1.87
YIF1A-212ENST00000528575 MINK1Q8N4C8 1332 aaPredicted RBP26.74■■□□□ 1.87
YIF1A-212ENST00000528575 TULP4Q9NRJ4 1543 aa26.74■■□□□ 1.87
YIF1A-212ENST00000528575 ALS2Q96Q42 1657 aa26.73■■□□□ 1.87
YIF1A-212ENST00000528575 TRPM1Q7Z4N2 1603 aa26.73■■□□□ 1.87
YIF1A-212ENST00000528575 RALGAPBQ86X10 1494 aa26.72■■□□□ 1.87
YIF1A-212ENST00000528575 PLCH1Q4KWH8 1693 aa26.72■■□□□ 1.87
YIF1A-212ENST00000528575 NBPF1Q3BBV0 1214 aa26.71■■□□□ 1.87
YIF1A-212ENST00000528575 GJD4Q96KN9 370 aaPredicted RBP26.71■■□□□ 1.87
YIF1A-212ENST00000528575 CRYBG1Q9Y4K1 1723 aa26.7■■□□□ 1.87
YIF1A-212ENST00000528575 UNC5CLQ8IV45 518 aa26.69■■□□□ 1.86
YIF1A-212ENST00000528575 ROCK2O75116 1388 aaKnown RBP26.69■■□□□ 1.86
YIF1A-212ENST00000528575 GPRASP1Q5JY77 1395 aa26.69■■□□□ 1.86
YIF1A-212ENST00000528575 ATP7BP35670 1465 aa26.68■■□□□ 1.86
YIF1A-212ENST00000528575 WASLO00401 505 aaPredicted RBP26.68■■□□□ 1.86
YIF1A-212ENST00000528575 ATAD2Q6PL18 1390 aa26.66■■□□□ 1.86
YIF1A-212ENST00000528575 NWD2Q9ULI1 1742 aa26.65■■□□□ 1.86
YIF1A-212ENST00000528575 BRWD3Q6RI45 1802 aa26.65■■□□□ 1.86
YIF1A-212ENST00000528575 PLEKHG5O94827 1062 aa26.65■■□□□ 1.86
YIF1A-212ENST00000528575 PSME1Q06323 249 aa26.65■■□□□ 1.86
YIF1A-212ENST00000528575 NRAPQ86VF7 1730 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms