RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 ROBO2Q9HCK4 1378 aa22.26■■□□□ 1.15
PUF60-212ENST00000528320 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
PUF60-212ENST00000528320 RBM6P78332 1123 aaKnown RBP22.25■■□□□ 1.15
PUF60-212ENST00000528320 RGL3Q3MIN7 710 aa22.25■■□□□ 1.15
PUF60-212ENST00000528320 IFT172Q9UG01 1749 aa22.25■■□□□ 1.15
PUF60-212ENST00000528320 SOS2Q07890 1332 aaPredicted RBP22.25■■□□□ 1.15
PUF60-212ENST00000528320 ORAI2Q96SN7 254 aa22.24■■□□□ 1.15
PUF60-212ENST00000528320 NRXN1Q9ULB1 1477 aa22.23■■□□□ 1.15
PUF60-212ENST00000528320 NGLY1Q96IV0 654 aa22.23■■□□□ 1.15
PUF60-212ENST00000528320 PIK3C2GO75747 1445 aa22.22■■□□□ 1.15
PUF60-212ENST00000528320 LAMC1P11047 1609 aa22.21■■□□□ 1.15
PUF60-212ENST00000528320 ADAMTS2O95450 1211 aa22.21■■□□□ 1.15
PUF60-212ENST00000528320 TECPR2O15040 1411 aa22.17■■□□□ 1.14
PUF60-212ENST00000528320 C14orf93Q9H972 538 aaKnown RBP22.17■■□□□ 1.14
PUF60-212ENST00000528320 MYOM2P54296 1465 aa22.16■■□□□ 1.14
PUF60-212ENST00000528320 RGS12O14924 1447 aa22.16■■□□□ 1.14
PUF60-212ENST00000528320 FNBP4Q8N3X1 1017 aaPredicted RBP22.15■■□□□ 1.14
PUF60-212ENST00000528320 USP21Q9UK80 565 aa22.15■■□□□ 1.14
PUF60-212ENST00000528320 ABCC11Q96J66 1382 aa22.14■■□□□ 1.14
PUF60-212ENST00000528320 LRPPRCP42704 1394 aaKnown RBP22.13■■□□□ 1.13
PUF60-212ENST00000528320 ESCO1Q5FWF5 840 aa22.13■■□□□ 1.13
PUF60-212ENST00000528320 TRPC5Q9UL62 973 aaPredicted RBP22.13■■□□□ 1.13
PUF60-212ENST00000528320 NPHP3Q7Z494 1330 aa22.12■■□□□ 1.13
PUF60-212ENST00000528320 DHX57Q6P158 1386 aaKnown RBP22.11■■□□□ 1.13
PUF60-212ENST00000528320 SIRT1Q96EB6 747 aa22.1■■□□□ 1.13
PUF60-212ENST00000528320 STAC3Q96MF2 364 aa22.1■■□□□ 1.13
PUF60-212ENST00000528320 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
PUF60-212ENST00000528320 CDC42BPGQ6DT37 1551 aa22.08■■□□□ 1.13
PUF60-212ENST00000528320 FOXO3O43524 673 aa22.08■■□□□ 1.13
PUF60-212ENST00000528320 CFAP70Q5T0N1 1121 aa22.07■■□□□ 1.12
PUF60-212ENST00000528320 WAPLQ7Z5K2 1190 aa22.07■■□□□ 1.12
PUF60-212ENST00000528320 STK26Q9P289 416 aa22.07■■□□□ 1.12
PUF60-212ENST00000528320 YTHDC2Q9H6S0 1430 aaKnown RBP22.06■■□□□ 1.12
PUF60-212ENST00000528320 COL22A1Q8NFW1 1626 aaPredicted RBP22.06■■□□□ 1.12
PUF60-212ENST00000528320 ATAD2Q6PL18 1390 aa22.06■■□□□ 1.12
PUF60-212ENST00000528320 PXDNQ92626 1479 aa22.05■■□□□ 1.12
PUF60-212ENST00000528320 ATRNO75882 1429 aa22.05■■□□□ 1.12
PUF60-212ENST00000528320 CLSPNQ9HAW4 1339 aa22.05■■□□□ 1.12
PUF60-212ENST00000528320 SRCAPQ6ZRS2 3230 aa22.04■■□□□ 1.12
PUF60-212ENST00000528320 KNDC1Q76NI1 1749 aa22.03■■□□□ 1.12
PUF60-212ENST00000528320 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
PUF60-212ENST00000528320 ADGRB1O14514 1584 aa22.03■■□□□ 1.12
PUF60-212ENST00000528320 PLEKHH1Q9ULM0 1364 aa22.02■■□□□ 1.12
PUF60-212ENST00000528320 NUTM2FA1L443 756 aa22.02■■□□□ 1.12
PUF60-212ENST00000528320 BCL9LQ86UU0 1499 aa22.02■■□□□ 1.12
PUF60-212ENST00000528320 DCAF11Q8TEB1 546 aa22.01■■□□□ 1.11
PUF60-212ENST00000528320 EP400Q96L91 3159 aa21.98■■□□□ 1.11
PUF60-212ENST00000528320 CCER1Q8TC90 406 aaPredicted RBP21.98■■□□□ 1.11
PUF60-212ENST00000528320 GJD4Q96KN9 370 aaPredicted RBP21.98■■□□□ 1.11
PUF60-212ENST00000528320 SPATA31A3Q5VYP0 1347 aa21.97■■□□□ 1.11
PUF60-212ENST00000528320 DLC1Q96QB1 1528 aa21.96■■□□□ 1.11
PUF60-212ENST00000528320 CCDC125Q86Z20 511 aa21.96■■□□□ 1.11
PUF60-212ENST00000528320 KRT28Q7Z3Y7 464 aa21.95■■□□□ 1.1
PUF60-212ENST00000528320 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
PUF60-212ENST00000528320 UNC5CLQ8IV45 518 aa21.93■■□□□ 1.1
PUF60-212ENST00000528320 MARF1Q9Y4F3 1742 aaKnown RBP21.93■■□□□ 1.1
PUF60-212ENST00000528320 FMN2Q9NZ56 1722 aa21.92■■□□□ 1.1
PUF60-212ENST00000528320 PSME1Q06323 249 aa21.9■■□□□ 1.1
PUF60-212ENST00000528320 PRAM1Q96QH2 718 aa21.9■■□□□ 1.1
PUF60-212ENST00000528320 ZRANB1Q9UGI0 708 aa21.9■■□□□ 1.1
PUF60-212ENST00000528320 PHF8Q9UPP1 1060 aa21.9■■□□□ 1.1
PUF60-212ENST00000528320 SLIT2O94813 1529 aa21.9■■□□□ 1.1
PUF60-212ENST00000528320 KIF1AQ12756 1690 aa21.89■■□□□ 1.1
PUF60-212ENST00000528320 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.86■■□□□ 1.09
PUF60-212ENST00000528320 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
PUF60-212ENST00000528320 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
PUF60-212ENST00000528320 HAP1P54257 671 aaPredicted RBP21.85■■□□□ 1.09
PUF60-212ENST00000528320 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
PUF60-212ENST00000528320 TRAK1Q9UPV9 953 aa21.85■■□□□ 1.09
PUF60-212ENST00000528320 TNS3Q68CZ2 1445 aa21.85■■□□□ 1.09
PUF60-212ENST00000528320 SBNO1A3KN83 1393 aa21.84■■□□□ 1.09
PUF60-212ENST00000528320 KIAA1210Q9ULL0 1709 aa21.83■■□□□ 1.09
PUF60-212ENST00000528320 VPS72Q15906 364 aa21.83■■□□□ 1.09
PUF60-212ENST00000528320 CABLES1Q8TDN4 633 aa21.83■■□□□ 1.09
PUF60-212ENST00000528320 ADGRB2O60241 1585 aa21.82■■□□□ 1.08
PUF60-212ENST00000528320 USP32Q8NFA0 1604 aa21.82■■□□□ 1.08
PUF60-212ENST00000528320 SAFB2Q14151 953 aaKnown RBP eCLIP21.82■■□□□ 1.08
PUF60-212ENST00000528320 NBPF1Q3BBV0 1214 aa21.82■■□□□ 1.08
PUF60-212ENST00000528320 GLI3P10071 1580 aa21.82■■□□□ 1.08
PUF60-212ENST00000528320 ONECUT3O60422 494 aaPredicted RBP21.81■■□□□ 1.08
PUF60-212ENST00000528320 POGKQ9P215 609 aa21.81■■□□□ 1.08
PUF60-212ENST00000528320 RGPD8O14715 1765 aaPredicted RBP21.81■■□□□ 1.08
PUF60-212ENST00000528320 ARHGEF10O15013 1369 aa21.8■■□□□ 1.08
PUF60-212ENST00000528320 LMOD2Q6P5Q4 547 aa21.8■■□□□ 1.08
PUF60-212ENST00000528320 BLMP54132 1417 aaPredicted RBP21.8■■□□□ 1.08
PUF60-212ENST00000528320 SEPT12Q8IYM1 358 aa21.79■■□□□ 1.08
PUF60-212ENST00000528320 PMFBP1Q8TBY8 1022 aa21.78■■□□□ 1.08
PUF60-212ENST00000528320 ANKARQ7Z5J8 1434 aa21.78■■□□□ 1.08
PUF60-212ENST00000528320 FAM83GA6ND36 823 aa21.76■■□□□ 1.07
PUF60-212ENST00000528320 PLEKHG5O94827 1062 aa21.76■■□□□ 1.07
PUF60-212ENST00000528320 ARHGEF28Q8N1W1 1705 aaKnown RBP21.76■■□□□ 1.07
PUF60-212ENST00000528320 WASLO00401 505 aaPredicted RBP21.75■■□□□ 1.07
PUF60-212ENST00000528320 CCDC9Q9Y3X0 531 aaKnown RBP21.75■■□□□ 1.07
PUF60-212ENST00000528320 PRR36Q9H6K5 1346 aa21.75■■□□□ 1.07
PUF60-212ENST00000528320 NWD2Q9ULI1 1742 aa21.73■■□□□ 1.07
PUF60-212ENST00000528320 SF3B2Q13435 895 aaKnown RBP21.73■■□□□ 1.07
PUF60-212ENST00000528320 HIRIP3Q9BW71 556 aaPredicted RBP21.73■■□□□ 1.07
PUF60-212ENST00000528320 BRWD3Q6RI45 1802 aa21.72■■□□□ 1.07
PUF60-212ENST00000528320 KRT27Q7Z3Y8 459 aa21.72■■□□□ 1.07
PUF60-212ENST00000528320 DEFB132Q7Z7B7 95 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms