RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 TECPR2O15040 1411 aa13.4□□□□□ -0.26
LINC00958-203ENST00000527945 TRPM1Q7Z4N2 1603 aa13.4□□□□□ -0.26
LINC00958-203ENST00000527945 LRPPRCP42704 1394 aaKnown RBP13.4□□□□□ -0.26
LINC00958-203ENST00000527945 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
LINC00958-203ENST00000527945 ARHGEF28Q8N1W1 1705 aaKnown RBP13.39□□□□□ -0.27
LINC00958-203ENST00000527945 CFAP70Q5T0N1 1121 aa13.39□□□□□ -0.27
LINC00958-203ENST00000527945 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
LINC00958-203ENST00000527945 TMEM132EQ6IEE7 984 aa13.38□□□□□ -0.27
LINC00958-203ENST00000527945 L3MBTL2Q969R5 705 aa13.38□□□□□ -0.27
LINC00958-203ENST00000527945 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
LINC00958-203ENST00000527945 PLEKHH1Q9ULM0 1364 aa13.37□□□□□ -0.27
LINC00958-203ENST00000527945 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
LINC00958-203ENST00000527945 YTHDC2Q9H6S0 1430 aaKnown RBP13.37□□□□□ -0.27
LINC00958-203ENST00000527945 C1orf167Q5SNV9 1468 aa13.35□□□□□ -0.27
LINC00958-203ENST00000527945 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
LINC00958-203ENST00000527945 POTEHQ6S545 545 aa13.34□□□□□ -0.27
LINC00958-203ENST00000527945 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
LINC00958-203ENST00000527945 SOS2Q07890 1332 aaPredicted RBP13.33□□□□□ -0.28
LINC00958-203ENST00000527945 PHLPP1O60346 1717 aa13.33□□□□□ -0.28
LINC00958-203ENST00000527945 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
LINC00958-203ENST00000527945 POTEAQ6S8J7 498 aa13.32□□□□□ -0.28
LINC00958-203ENST00000527945 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
LINC00958-203ENST00000527945 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
LINC00958-203ENST00000527945 FMN2Q9NZ56 1722 aa13.31□□□□□ -0.28
LINC00958-203ENST00000527945 NBPF1Q3BBV0 1214 aa13.31□□□□□ -0.28
LINC00958-203ENST00000527945 STK26Q9P289 416 aa13.31□□□□□ -0.28
LINC00958-203ENST00000527945 LRP6O75581 1613 aa13.31□□□□□ -0.28
LINC00958-203ENST00000527945 ADGRB2O60241 1585 aa13.3□□□□□ -0.28
LINC00958-203ENST00000527945 WAPLQ7Z5K2 1190 aa13.3□□□□□ -0.28
LINC00958-203ENST00000527945 USP32Q8NFA0 1604 aa13.3□□□□□ -0.28
LINC00958-203ENST00000527945 SHPRHQ149N8 1683 aa13.3□□□□□ -0.28
LINC00958-203ENST00000527945 NHSL1Q5SYE7 1610 aa13.29□□□□□ -0.28
LINC00958-203ENST00000527945 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
LINC00958-203ENST00000527945 RALGAPBQ86X10 1494 aa13.28□□□□□ -0.28
LINC00958-203ENST00000527945 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
LINC00958-203ENST00000527945 ZNF772Q68DY9 489 aaPredicted RBP13.27□□□□□ -0.29
LINC00958-203ENST00000527945 TONSLQ96HA7 1378 aa13.26□□□□□ -0.29
LINC00958-203ENST00000527945 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
LINC00958-203ENST00000527945 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
LINC00958-203ENST00000527945 POGKQ9P215 609 aa13.25□□□□□ -0.29
LINC00958-203ENST00000527945 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
LINC00958-203ENST00000527945 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
LINC00958-203ENST00000527945 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
LINC00958-203ENST00000527945 CLSPNQ9HAW4 1339 aa13.24□□□□□ -0.29
LINC00958-203ENST00000527945 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
LINC00958-203ENST00000527945 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
LINC00958-203ENST00000527945 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
LINC00958-203ENST00000527945 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.295e-7■■□□□ 11.8
LINC00958-203ENST00000527945 DDX17Q92841 729 aaKnown RBP13.22□□□□□ -0.29
LINC00958-203ENST00000527945 PXDNQ92626 1479 aa13.22□□□□□ -0.29
LINC00958-203ENST00000527945 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
LINC00958-203ENST00000527945 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.29
LINC00958-203ENST00000527945 TULP4Q9NRJ4 1543 aa13.21□□□□□ -0.29
LINC00958-203ENST00000527945 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
LINC00958-203ENST00000527945 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
LINC00958-203ENST00000527945 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
LINC00958-203ENST00000527945 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
LINC00958-203ENST00000527945 COL22A1Q8NFW1 1626 aaPredicted RBP13.18□□□□□ -0.3
LINC00958-203ENST00000527945 MEX3CQ5U5Q3 659 aaKnown RBP13.18□□□□□ -0.3
LINC00958-203ENST00000527945 HIRIP3Q9BW71 556 aaPredicted RBP13.18□□□□□ -0.3
LINC00958-203ENST00000527945 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
LINC00958-203ENST00000527945 ATP7BP35670 1465 aa13.17□□□□□ -0.3
LINC00958-203ENST00000527945 AFF2P51816 1311 aa13.17□□□□□ -0.3
LINC00958-203ENST00000527945 PRR36Q9H6K5 1346 aa13.17□□□□□ -0.3
LINC00958-203ENST00000527945 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
LINC00958-203ENST00000527945 FOXO3O43524 673 aa13.17□□□□□ -0.3
LINC00958-203ENST00000527945 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
LINC00958-203ENST00000527945 NUTM2FA1L443 756 aa13.16□□□□□ -0.3
LINC00958-203ENST00000527945 RXRBP28702 533 aa13.16□□□□□ -0.3
LINC00958-203ENST00000527945 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
LINC00958-203ENST00000527945 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
LINC00958-203ENST00000527945 SPATA31A3Q5VYP0 1347 aa13.15□□□□□ -0.3
LINC00958-203ENST00000527945 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
LINC00958-203ENST00000527945 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
LINC00958-203ENST00000527945 PSME1Q06323 249 aa13.15□□□□□ -0.3
LINC00958-203ENST00000527945 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
LINC00958-203ENST00000527945 TRPM3Q9HCF6 1732 aaPredicted RBP13.15□□□□□ -0.3
LINC00958-203ENST00000527945 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
LINC00958-203ENST00000527945 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
LINC00958-203ENST00000527945 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
LINC00958-203ENST00000527945 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
LINC00958-203ENST00000527945 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
LINC00958-203ENST00000527945 BCL9LQ86UU0 1499 aa13.11□□□□□ -0.31
LINC00958-203ENST00000527945 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
LINC00958-203ENST00000527945 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
LINC00958-203ENST00000527945 NGLY1Q96IV0 654 aa13.11□□□□□ -0.31
LINC00958-203ENST00000527945 CARD11Q9BXL7 1154 aa13.11□□□□□ -0.31
LINC00958-203ENST00000527945 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
LINC00958-203ENST00000527945 ALS2Q96Q42 1657 aa13.1□□□□□ -0.31
LINC00958-203ENST00000527945 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.314e-18■□□□□ 10.1
LINC00958-203ENST00000527945 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
LINC00958-203ENST00000527945 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
LINC00958-203ENST00000527945 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
LINC00958-203ENST00000527945 ATRNO75882 1429 aa13.1□□□□□ -0.31
LINC00958-203ENST00000527945 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
LINC00958-203ENST00000527945 AKAP12Q02952 1782 aa13.09□□□□□ -0.31
LINC00958-203ENST00000527945 ARHGEF10O15013 1369 aa13.09□□□□□ -0.31
LINC00958-203ENST00000527945 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
LINC00958-203ENST00000527945 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
LINC00958-203ENST00000527945 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms